Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d15
         (281 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   5.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   5.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   6.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   6.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   6.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    19   8.8  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    19   8.8  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    19   8.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   8.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 166 IIGALIYFLHQQ 131
           I G L YFLH+Q
Sbjct: 256 IRGQLYYFLHKQ 267


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 166 IIGALIYFLHQQ 131
           I G L YFLH+Q
Sbjct: 256 IRGQLYYFLHKQ 267


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 214 LILILPGIXSFGKVLFIIGAL 152
           +++I+P +  FG VL I+  +
Sbjct: 192 ILVIVPCLTLFGNVLVILAVV 212


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 160 GALIYFLHQQ 131
           G L Y++HQQ
Sbjct: 231 GELFYYMHQQ 240


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 210 IRAFPMTMDEKYVERIWS 263
           I  FP   D K+  R+W+
Sbjct: 170 ITIFPQRTDGKHDYRVWN 187


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -2

Query: 154 LIYFLHQQNNLFLYHN 107
           ++Y +  +N L +Y N
Sbjct: 201 MVYMVDNKNTLIIYQN 216


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +3

Query: 114 YKNKLFCWCKKY 149
           YK+ L CW   Y
Sbjct: 253 YKSTLHCWATIY 264


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +3

Query: 114 YKNKLFCWCKKY 149
           YK+ L CW   Y
Sbjct: 253 YKSTLHCWATIY 264


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 49  DIIDVNENNDVLS 87
           DII++ EN D +S
Sbjct: 361 DIINIQENGDQVS 373


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,020
Number of Sequences: 438
Number of extensions: 1225
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)