Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d14
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077539-3|AAC26291.1|  310|Caenorhabditis elegans Hypothetical ...    84   8e-17
AF068709-15|AAC19246.2|  317|Caenorhabditis elegans Serpentine r...    31   0.48 
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical p...    27   7.8  
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical...    27   7.8  

>AF077539-3|AAC26291.1|  310|Caenorhabditis elegans Hypothetical
           protein T25D3.2 protein.
          Length = 310

 Score = 83.8 bits (198), Expect = 8e-17
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
 Frame = +3

Query: 207 IASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPLKFPAEINE 386
           +   LP  YK  + E  +     VH+ P   ++  D        ++  PI      E ++
Sbjct: 41  VVHRLPEHYKTRYWETILSDKTPVHYRPPTSRFAHDSFKNVEIELEENPIIGIRTPEGDD 100

Query: 387 GIWGGEAVVKGFQKRDD--RRRRVPHYWVP-----VLKRTVVRSEVLNTHLSVTVTDRTI 545
           G+WGGE VVKG+ +     +++ +P YWVP      LK  V+ SE+L+ ++ VTVT+R +
Sbjct: 101 GLWGGERVVKGWIESAPYTKKKILPRYWVPKLFFPALKNVVLYSEILDKYIKVTVTERAM 160

Query: 546 SLINDHYGFDHYLLKT 593
            LI++H+G D+Y+L++
Sbjct: 161 RLIDEHFGLDYYILES 176


>AF068709-15|AAC19246.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 62 protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +3

Query: 222 PPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPLKFPAEINEGI 392
           P  Y+ FW  W +L    V F     K+  D    E Y +    I + FP  +++ I
Sbjct: 131 PYQYENFWSRWNLLVFLVVCFFSHLPKYLWDGFLYEVYIVNGQLICINFPTTLDQAI 187


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 234 KKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNI 350
           K F  E KV+ P  VHFV +    K +E+TGE   ++ +
Sbjct: 422 KPFNIEEKVIFPVEVHFVSKIRDEKTEEITGEKNVVKTL 460


>Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical
           protein F36G9.6 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 76  LISFPKDLCFQK-NYKAIRWHPLVY 147
           LI FP D  FQK N K +RW PL++
Sbjct: 136 LIIFPSD--FQKINIKILRWLPLIF 158


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 68   KFC*YLSPKIYASKKTIKQFDGILSFTGNCASVVENI 178
            KFC    PK ++  K I Q D ++S   +   V ENI
Sbjct: 1109 KFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENI 1145


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 68   KFC*YLSPKIYASKKTIKQFDGILSFTGNCASVVENI 178
            KFC    PK ++  K I Q D ++S   +   V ENI
Sbjct: 1109 KFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENI 1145


>Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical
           protein ZK1128.3 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 512 SIENFRSYYSSLQYWHPVVRYPASSIITLLETFNH 408
           S+ENF+S+     YW+P +   ++S   +  T+NH
Sbjct: 173 SVENFQSHRMRRVYWNPSIPKDSNS---MFRTWNH 204


>AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical
           protein Y51H7C.13 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 327 ETYPI--QNIPIPLKFPAEINEGIWGGEAVV 413
           E YP+  +N P P  +P E+  G  GGE  +
Sbjct: 279 EPYPVPTENPPSPTNYPPEVTTGSPGGEVEI 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,549,725
Number of Sequences: 27780
Number of extensions: 285975
Number of successful extensions: 721
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)