BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12d13 (492 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z66515-4|CAA91350.1| 153|Caenorhabditis elegans Hypothetical pr... 68 3e-12 Z69361-1|CAE17943.1| 468|Caenorhabditis elegans Hypothetical pr... 30 1.0 Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z54327-9|CAA91122.2| 839|Caenorhabditis elegans Hypothetical pr... 27 9.8 AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 27 9.8 AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical... 27 9.8 AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid ... 27 9.8 >Z66515-4|CAA91350.1| 153|Caenorhabditis elegans Hypothetical protein R53.4 protein. Length = 153 Score = 68.1 bits (159), Expect = 3e-12 Identities = 31/65 (47%), Positives = 38/65 (58%) Frame = +3 Query: 96 GDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWR 275 G + K +N VHGPY RYYGK DT F +KL ++ +W RR KTPSA F R WR Sbjct: 47 GLFDKRWNKNVHGPYCHWRYYGKLDTKFMDVKLGDLPAWMARREKTPSAFYNEFMRNIWR 106 Query: 276 WQHKY 290 + Y Sbjct: 107 VHNLY 111 >Z69361-1|CAE17943.1| 468|Caenorhabditis elegans Hypothetical protein T13H10.2 protein. Length = 468 Score = 29.9 bits (64), Expect = 1.0 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%) Frame = +1 Query: 331 YSLAAWSSSMP---STMEELSTHKNYKYH*RTDSVPV 432 +S + SSSMP S E+L H+N +YH + S+P+ Sbjct: 2 FSATSSSSSMPPSQSPFEKLPRHQNIRYHEKCFSIPL 38 >Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein F39B1.1 protein. Length = 1607 Score = 28.7 bits (61), Expect = 2.4 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +3 Query: 156 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKKVGMAPFYQ 329 + PD P Q K+N+I + S PS+ +G+ + + ++ Y +P + G P Q Sbjct: 34 FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90 >Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein F39B1.1 protein. Length = 1607 Score = 28.7 bits (61), Expect = 2.4 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +3 Query: 156 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKKVGMAPFYQ 329 + PD P Q K+N+I + S PS+ +G+ + + ++ Y +P + G P Q Sbjct: 34 FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90 >Z54327-9|CAA91122.2| 839|Caenorhabditis elegans Hypothetical protein C26D10.4 protein. Length = 839 Score = 26.6 bits (56), Expect = 9.8 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 119 IILLGVITESHIFRKARCTFLKINSSRYLPN 27 I+ LG IF K +C L+IN+S LP+ Sbjct: 570 IVSLGFTNILDIFEKLQCCGLRINTSSDLPH 600 >AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical protein Y2H9A.3 protein. Length = 291 Score = 26.6 bits (56), Expect = 9.8 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +3 Query: 141 DPARYYGKPDTPFSQLKLNEIGSWFG--RRSKTPSAVAGAFSRA 266 D +Y + + KLNE G+W G R++ PS + F RA Sbjct: 31 DINEFYDQTMETMDEFKLNERGAWHGMVERTRAPSEI--LFGRA 72 >AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical protein Y69A2AR.5 protein. Length = 322 Score = 26.6 bits (56), Expect = 9.8 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -2 Query: 329 LIEWSHANLLRLYVLMLPSPPGSTESSGHGRRSLAAATEPR 207 +I W+ A + R++ PG+ E SG+ +S+ +EP+ Sbjct: 61 IINWTSATISRIHEYQADGNPGAEEQSGYWLQSV--KSEPK 99 >AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid oxidase protein. Length = 322 Score = 26.6 bits (56), Expect = 9.8 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -2 Query: 329 LIEWSHANLLRLYVLMLPSPPGSTESSGHGRRSLAAATEPR 207 +I W+ A + R++ PG+ E SG+ +S+ +EP+ Sbjct: 61 IINWTSATISRIHEYQADGNPGAEEQSGYWLQSV--KSEPK 99 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,514,750 Number of Sequences: 27780 Number of extensions: 246305 Number of successful extensions: 637 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 610 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 637 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 924715866 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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