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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d12
         (636 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0131 + 27898028-27898042,27898159-27898274,27898361-278984...   165   3e-41
01_06_0730 - 31552747-31553088,31553583-31553646,31553743-315538...   163   1e-40
01_06_0180 - 27260099-27260440,27261236-27261350,27261403-272615...   142   2e-34
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583...    29   2.3  
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680...    29   2.3  
01_06_0048 + 25951544-25952074                                         28   5.4  
09_03_0202 + 13469580-13469585,13469597-13470142                       28   7.1  
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564...    28   7.1  
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494...    28   7.1  
11_01_0129 - 1073002-1073073,1073463-1073585,1073667-1073732,107...    27   9.4  
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173...    27   9.4  

>05_07_0131 +
           27898028-27898042,27898159-27898274,27898361-27898424,
           27899450-27899791
          Length = 178

 Score =  165 bits (400), Expect = 3e-41
 Identities = 75/173 (43%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
 Frame = +1

Query: 34  QLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXX 213
           +  +Y+V+GR LP+  +  P +Y+M++++ + + AKS+FWYFLR+LKK KK+ G+++   
Sbjct: 5   RFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAIN 64

Query: 214 XXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 393
                      N+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R   IQ
Sbjct: 65  EIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQ 124

Query: 394 IIKVEVIKAAACRRPQVKQFHNSTIRFPL---PKRVHHYKRLNTFAYKRPSTY 543
           IIK   +    C+R   KQFHNS I+FPL     R    K   TF   RP+ +
Sbjct: 125 IIKTATVHFKLCKRDNTKQFHNSNIKFPLVYRKVRPPTRKLKTTFKASRPNLF 177


>01_06_0730 -
           31552747-31553088,31553583-31553646,31553743-31553858,
           31553964-31553978
          Length = 178

 Score =  163 bits (395), Expect = 1e-40
 Identities = 75/173 (43%), Positives = 107/173 (61%), Gaps = 3/173 (1%)
 Frame = +1

Query: 34  QLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXX 213
           +  +Y+V+GR LP+  +  P +Y+M++++ + + AKS+FWYFLR+LKK KK+ G+I+   
Sbjct: 5   RFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAIN 64

Query: 214 XXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 393
                      N+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R   IQ
Sbjct: 65  EIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQ 124

Query: 394 IIKVEVIKAAACRRPQVKQFHNSTIRFPL---PKRVHHYKRLNTFAYKRPSTY 543
           IIK   +    C+R   KQFH S I+FPL     R    K   TF   RP+ +
Sbjct: 125 IIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLF 177


>01_06_0180 -
           27260099-27260440,27261236-27261350,27261403-27261518,
           27261594-27261608
          Length = 195

 Score =  142 bits (345), Expect = 2e-34
 Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 20/190 (10%)
 Frame = +1

Query: 34  QLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRF----------W-------YFL 162
           +  +Y+V+GR LP+  +  P +Y+M++++ + + AKS+F          W       YFL
Sbjct: 5   RFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFCSSYLVRFADWGACPVCRYFL 64

Query: 163 RQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQ 342
           R+LKK KK+ G+++              N+GIWLRY+SR+G HNMY+EYRD ++ GAV Q
Sbjct: 65  RKLKKVKKSNGQMLAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQ 124

Query: 343 CYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPL---PKRVHHYKRLN 513
            Y +M +RHR R   IQIIK   +    C+R   KQFHN +I+FPL     R    K   
Sbjct: 125 MYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHNGSIKFPLVYRKVRPPTRKLKT 184

Query: 514 TFAYKRPSTY 543
           TF   RP+ +
Sbjct: 185 TFKASRPNLF 194


>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
            14058450-14058570,14058926-14059320,14059410-14059534,
            14059646-14059876,14060012-14060484,14060587-14060693,
            14060842-14061172,14061222-14061250,14061345-14061901,
            14062170-14062255,14062344-14062406,14062646-14063001,
            14063101-14063356
          Length = 1272

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 369  QSPSSFNTDYQSGSNQGCCVSPSTGQTVPQQHHQIPIAQTCAPLQET 509
            Q P S  T+YQ  SN     +    Q   + HHQ+PI  + +    T
Sbjct: 950  QCPQSTETNYQRCSNGETESNQPVSQNELEDHHQVPITASSSTNNST 996


>12_01_0752 -
           6798938-6799312,6799628-6799768,6800257-6800325,
           6800407-6800454,6801740-6801836,6801922-6802001,
           6802099-6802170,6802335-6802429,6802853-6802934,
           6805476-6805853
          Length = 478

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +3

Query: 387 NTDYQSGSNQGCC----VSPSTGQTVPQQHHQIPIAQTCAP 497
           N  +  G N+G        P+  QT P+QH Q+PI  T  P
Sbjct: 406 NNHHHQGGNRGGAHHVGTPPNQQQTKPEQHPQLPIGATKQP 446


>01_06_0048 + 25951544-25952074
          Length = 176

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 161 RKYQKRDLATIGSGEKILILYKGGLGSFSDG 69
           RKY   D +  G G   L+   GG GS SDG
Sbjct: 24  RKYHSVDSSAAGRGTSNLVRLGGGSGSGSDG 54


>09_03_0202 + 13469580-13469585,13469597-13470142
          Length = 183

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = +2

Query: 443 SNSSTTAPSDSHCPNVCTTTRDLIPSR-TRGLALTSCNCNVRXITIKPM*KW 595
           S  S   P D H P       DLIPS   +  +  +  C    I  +P  KW
Sbjct: 75  SKQSNNNPHDVHVPQALELMDDLIPSNGNKRRSSKNIKCFTHWIECEPNDKW 126


>05_07_0028 +
           27153663-27153932,27154966-27155175,27156220-27156414,
           27156491-27156840,27157198-27157423,27157524-27157692,
           27158145-27158990,27159647-27159818,27159934-27160052,
           27160117-27160155,27161033-27161157,27161250-27161309,
           27161471-27161542,27161980-27162114
          Length = 995

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 157 NTRNEIWRQLDPERKFSFYTREVWARSPTGA 65
           N   + WRQ+     F  +  E W RSPT +
Sbjct: 715 NNMLDTWRQVTKNTMFDEWLNEWWKRSPTSS 745


>02_04_0185 -
           20748206-20748405,20749067-20749232,20749373-20749471,
           20749487-20749561,20749663-20749743,20750121-20750274,
           20750330-20750425,20750518-20750727,20750746-20750957
          Length = 430

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 454 HNSTIRFPLPKRVHHYKRLNTFAY 525
           H+  +R PLP  +HH     TFAY
Sbjct: 221 HDPEVRDPLPLTIHHLPIAVTFAY 244


>11_01_0129 -
           1073002-1073073,1073463-1073585,1073667-1073732,
           1074227-1074347,1074536-1074603,1074792-1074863,
           1076045-1076222,1077554-1077888
          Length = 344

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -1

Query: 261 PDTKILNLDGAFLWNFLNRDNFTSGLLELLKLSQEI 154
           PD++I+ +DGAF       D F +G +E+L+L++E+
Sbjct: 175 PDSRIVYIDGAF-------DLFHAGHVEILRLAREL 203


>03_01_0219 +
           1731267-1731728,1732148-1732235,1732330-1732417,
           1732528-1732573,1732687-1732785,1734363-1734431,
           1735706-1736036,1736123-1736256,1736400-1737251
          Length = 722

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 372 SPSSFNTDYQSGSNQGCCVSPSTGQTVPQQHH 467
           S +   T  ++G+N  C    STGQT P Q H
Sbjct: 561 SATKLATKCENGANVSCDGVGSTGQTPPLQQH 592


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,825,172
Number of Sequences: 37544
Number of extensions: 377390
Number of successful extensions: 1110
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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