Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d10
(394 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27.06c |mgr2||mitochondrial membrane protein Mgr1 |Schizosac... 64 6e-12
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.19
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 1.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 1.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 1.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 1.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 1.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 2.4
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 2.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 2.4
SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr... 25 3.2
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 25 5.5
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 25 5.5
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 5.5
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 25 5.5
SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4 |Schi... 25 5.5
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 24 7.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 24 7.3
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 24 7.3
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 24 7.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 24 9.7
SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Sch... 24 9.7
SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA methyltransfera... 24 9.7
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 24 9.7
>SPBC27.06c |mgr2||mitochondrial membrane protein Mgr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 120
Score = 64.5 bits (150), Expect = 6e-12
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 138 PSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVGKVMLQGGGTFGTFMA 317
PS DK+KMG ++G G+ G LFGG LRYG + + ++G+ ML TFG FM+
Sbjct: 6 PSTVDKLKMGAIMGSAAGLGIGFLFGGVAVLRYGPGPRGFLRTLGQYMLTSAATFGFFMS 65
Query: 318 IGTGIR 335
IG+ IR
Sbjct: 66 IGSVIR 71
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.5 bits (63), Expect = 0.19
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 346 TNQQRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPP 200
+N R+ A+K PPP +P ++S P Y PP++ P
Sbjct: 191 SNYVRLLEDSAVKAQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAP 239
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.1 bits (57), Expect = 1.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 292 PP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPT 185
P S+ P E + + P +A PKR P A PT
Sbjct: 413 PDVSVNAPAETQDKSTVVPQESATATPKRSPSATPT 448
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 1.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 241 APYLNAVNPPKRPPLAIPTQKPIIKPIFILSKHEGPWL**TAPGT 107
AP L+ +NP PP PTQ+ ++P ++ P++ PGT
Sbjct: 450 APALS-MNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFI----PGT 489
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 1.4
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -1
Query: 337 QRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPI 161
QR VP+ + P+VP P + E S P P + V P+ P + P P++ +
Sbjct: 621 QRPAVPVVPEAPSVPQPPAAPVVPE-VPSVPQRPAVPVV--PEAPSVPQPPAAPVVPEV 676
Score = 25.4 bits (53), Expect = 3.2
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 322 PIAIKVPNVP-PP*SITFP-TECTNSFPLAPYLNAV-NPPKRPPLAIPTQKPII 170
P+A +VP+VP PP + P P+AP V + P+RP + + + P +
Sbjct: 581 PVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSV 634
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 1.4
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPP-KRPPLAIPTQKPIIKP 164
PVP+ P VP P P + P P + PP P IP P+ KP
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP---PVPKP 1184
Score = 26.2 bits (55), Expect = 1.8
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
PVP P VP P P + P P + PP P P P+ KP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP---PVPKP 1164
Score = 24.2 bits (50), Expect = 7.3
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -1
Query: 328 PVPI-AIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
PVP ++ P VP P P + P P + PP P P P+ KP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP---PVPKP 1145
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 1.8
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -1
Query: 322 PIAIKVP----NVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
PI K P ++PPP P + S P P PPK PP + +Q P+
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL-SQAPV 211
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 2.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -1
Query: 307 VPNVPPP*SITFPTECTNSFPL-APYLNAVNPPKR----PPLAIPTQKP 176
+P PPP T P + TN+ L P N N + PP A P+Q P
Sbjct: 235 LPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 2.4
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 295 PPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQK-PIIKPIFILSKHEGP 134
PPP + P+ PL+ NPP PP AIP + P + P+ S+ P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP-AIPGRSAPALPPLGNASRTSTP 415
Score = 23.8 bits (49), Expect = 9.7
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = -1
Query: 343 NQQRIPVPIAIKVPNVPPP*SITFPTECTNSFPL-APYLNAVNP--PKRPPLAIPTQKPI 173
N R P P++PP + P S P+ AP + P P PPL P P
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL--PAGMPA 465
Query: 172 IKPI 161
P+
Sbjct: 466 APPL 469
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 2.4
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -1
Query: 319 IAIKVPNVPPP*SITFPTECTNSFPL---APYLNAVNPPKRPP 200
+ +K P PPP ++ PT P+ AP + PP PP
Sbjct: 727 LLLKSPPPPPP-AVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 323
Score = 25.4 bits (53), Expect = 3.2
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 224 CIKVWSKGERVSTFRW-KSNASRWRHIWDFYG 316
C++ W+KG+R+ ++ K++ + I D YG
Sbjct: 73 CVEQWTKGDRLKAVQYAKTHYETFLSICDDYG 104
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 5.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 346 TNQQRIPVPIAIKVPNV-PPP*SITFPTECTNSFPLAPYLNAVNPPKRP 203
T+QQ P P A+ PN+ P SI+ + PY+ P K P
Sbjct: 547 TSQQLNPAPTAMPHPNITSPSPSISVTQRPAVNVGPPPYVRPSAPSKLP 595
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 24.6 bits (51), Expect = 5.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 254 LFPPCSIP*CSKSAEKTSTSHPY 186
LF PC +P A K +++ PY
Sbjct: 35 LFTPCPVPPSFPKASKPNSNQPY 57
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 24.6 bits (51), Expect = 5.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 259 TNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
+NSF L P NPP L P Q+ IKP
Sbjct: 346 SNSFSLFPNATLPNPPSSELLTTPFQQ--IKP 375
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 24.6 bits (51), Expect = 5.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 162 FSFYQ-NTKVLGCDKQHPVQAF*IKLFVSYSCPLAIQS 52
FSFY + V+G K +QA + + S SCP + S
Sbjct: 341 FSFYSLPSTVIGNPKYKDIQAAYLYYYASDSCPKDLSS 378
>SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 24.6 bits (51), Expect = 5.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 317 YWNWYTLLISFL 352
YWNWYT+ F+
Sbjct: 123 YWNWYTIDACFI 134
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 24.2 bits (50), Expect = 7.3
Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 224 CIKVWSKGERVSTFRWKSNASRWRH-IWDFYGYWNWYTLLISFLMSISY 367
C + + + + R+ + +S +R +WDFY + T+L+ L + +
Sbjct: 971 CTQTVTTAKALHLARFCTKSSHYRKKLWDFYNFSCTITILMLLLAPLDF 1019
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 24.2 bits (50), Expect = 7.3
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = -1
Query: 322 PIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPI 161
P++ V N+ P PT + +P ++ P++ P+ T+K + KP+
Sbjct: 736 PVSTIVSNISP-----LPTVAPPNVSGSPSETPISKPEKVPVVSQTEKALPKPL 784
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 24.2 bits (50), Expect = 7.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 108 VPGAVYHNQGPSCFDKMKMGFMIGFCV 188
VP A+ + +K+GFM+G C+
Sbjct: 468 VPFAIIKLYFAQTYSSVKLGFMLGTCI 494
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 24.2 bits (50), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 307 VPNVPPP*SIT-FPTECTNSF 248
+P +P P + FPT CTN F
Sbjct: 355 LPKLPTPSELRPFPTRCTNVF 375
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 23.8 bits (49), Expect = 9.7
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = -1
Query: 337 QRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
Q+ P+ ++ PP PT P + ++A PP +P A+P+ +
Sbjct: 1340 QQAPLENQFSKMSLEPPVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMPSHNAV 1394
>SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 207
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 193 IPTQKPIIKPIFILSKHEGPWL 128
IP+Q+ IKP F E PW+
Sbjct: 145 IPSQQRSIKPPFHPMNEEQPWI 166
>SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 23.8 bits (49), Expect = 9.7
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +2
Query: 212 RRIYCIKVWSKGERVSTFRWKSNASR----WRHIWDFYGYW 322
+ I+ + + G RVS KSNA + W +WD W
Sbjct: 433 QNIFVSALLNAGYRVSGSHAKSNAIKTNAPWSFVWDVLRSW 473
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 262 CTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIK 167
C NS+ + ++A++ +RP L IPT K ++
Sbjct: 243 CFNSYLV---VSAMSKVRRPTLTIPTPKKFVR 271
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,544,533
Number of Sequences: 5004
Number of extensions: 33290
Number of successful extensions: 125
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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