Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d10
(394 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 32 0.14
SB_50338| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05) 31 0.25
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.33
SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05) 31 0.44
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 29 1.0
SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 28 2.3
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_111| Best HMM Match : Drf_FH1 (HMM E-Value=0.31) 28 2.3
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 28 2.3
SB_3196| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 3.1
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 3.1
SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 27 4.1
SB_50509| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4) 27 4.1
SB_2629| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 27 5.4
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_55538| Best HMM Match : zf-BED (HMM E-Value=1.4) 27 7.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_55298| Best HMM Match : THAP (HMM E-Value=2.4e-11) 27 7.2
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_22151| Best HMM Match : MORN (HMM E-Value=6) 27 7.2
SB_11570| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_41099| Best HMM Match : VWA (HMM E-Value=0) 26 9.5
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_29301| Best HMM Match : MFS_1 (HMM E-Value=2.9e-05) 26 9.5
SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3) 26 9.5
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
>SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 869
Score = 32.3 bits (70), Expect = 0.14
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 325 VPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQ---KPIIKPIFI 155
VP + V PP +I F + P+ P L+ PP PP+ + KP+ K + +
Sbjct: 315 VPGGMVVLPPPPMEAIDFTSSADVPSPIPPPLDFATPPMAPPVEFSDESSPKPLKKKL-V 373
Query: 154 LSKHEGPWL 128
++ PWL
Sbjct: 374 INSEAFPWL 382
>SB_50338| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05)
Length = 374
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 283 SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
+I T C F L P LN+V P P A PT KP+
Sbjct: 133 NIVCSTTCKKGFQLHPNLNSVCIPIPTPTAKPTSKPM 169
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 0.33
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
P P+ PN PPP + +P P PY NPP PP P P
Sbjct: 157 PPPLYPPPPNPPPP-NAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPP 206
Score = 30.3 bits (65), Expect = 0.58
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
P PPP + +P P APY NPP PPL P P
Sbjct: 130 PPYPPPPNAPYPPS-----PNAPYPPPPNPPYPPPLYPPPPNP 167
Score = 30.3 bits (65), Expect = 0.58
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPP 200
P P PN PPP P + P P NA NPP PP
Sbjct: 194 PYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPP 236
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPL---APYLNAVNPPKRPPLAIPTQKPIIKP 164
P PPP + +P +P APY + N P PP P P+ P
Sbjct: 114 PPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPP 163
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNAVN-PPKRPPLAIPTQKP 176
P PPP + +P +P P NA N PP PP P P
Sbjct: 177 PPYPPPPNPPYPPPPNPPYPPPP--NAPNPPPPNPPYPPPPNAP 218
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIP 188
P PPP + P +P P NA NPP PP P
Sbjct: 193 PPYPPPPNAPNPPPPNPPYPPPP--NAPNPPYPPPPNAP 229
>SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 30.7 bits (66), Expect = 0.44
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNA--VNPPKRPPLAIPTQKPIIKPIFI 155
PVP + P PPP + PT C P +PYL A ++ + L ++ + +F
Sbjct: 936 PVPHPLLRPCAPPPATALCPTPCYG--PYSPYLIAEYIHVAQGVHLPSHVKEVLTDGVFC 993
Query: 154 LSKHEGPWL**TAPGTGILNKTICKLF--LSFSYTKYNKITSK 32
L G TA L+K +LF L+ Y KY+K T K
Sbjct: 994 LLDLCGDHE--TALLHATLSKGSRELFKTLNEEYNKYHKFTGK 1034
Score = 30.3 bits (65), Expect = 0.58
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLA-IPTQKPIIKPI 161
PVP + P PPP + PT C P P L PP L P P+ P+
Sbjct: 886 PVPHPLLRPCAPPPATALCPTPCYGPVP-HPLLRPCAPPPATALCPTPCYGPVPHPL 941
Score = 29.9 bits (64), Expect = 0.77
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLA-IPTQKPIIKPI 161
PVP + P PPP + PT C P P L PP L P P+ P+
Sbjct: 861 PVPHHLLRPCAPPPATALCPTPCYGPVP-HPLLRPCAPPPATALCPTPCYGPVPHPL 916
Score = 28.3 bits (60), Expect = 2.3
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPI 161
PVP + P PPP + PT C P PP P P+ P+
Sbjct: 836 PVPHPLLRPCAPPPATALCPTPCYGPVPHHLLRPCAPPPATALCPTPCYGPVPHPL 891
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPT 185
PVP + P PPP + PT C P P L PP L PT
Sbjct: 911 PVPHPLLRPCAPPPATALCPTPCYGPVP-HPLLRPCAPPPATALC-PT 956
>SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05)
Length = 331
Score = 30.7 bits (66), Expect = 0.44
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 283 SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
+I T C F L P LN+V P P A PT KP+
Sbjct: 188 NIVCSTTCKMGFQLHPNLNSVCIPIPTPTANPTSKPM 224
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 29.5 bits (63), Expect = 1.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 180 FCVGMASGGLFGGFTALRYGARGKELVHSVGKVMLQGGGTFG------TFMAIGTGIRC* 341
F GM G + GG+ + R+G R LV S ++L G F F+ G G+
Sbjct: 122 FFAGMLVGSMVGGWASDRFGRRLCLLVGSAIMLILSFGTAFADCLSLLAFLRFGVGVAHV 181
Query: 342 LVF*CQ*VI*ISL 380
V CQ V I L
Sbjct: 182 SVMVCQYVYVIEL 194
>SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 120 VYHNQGPSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGAR 245
VY SC++++ G + C +GG+ GG T + AR
Sbjct: 1082 VYSVSLDSCYNELFTGRRLQSCGNQGTGGVIGGITRTIWSAR 1123
>SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 172 IKPIFILSKHEGPWL 128
IKP FI++KH+ PWL
Sbjct: 100 IKPDFIVAKHDQPWL 114
>SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 28.3 bits (60), Expect = 2.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 283 SITFPTECTNSFPLA-PYLNAVNPPKRPPLAIPTQKPIIKP 164
SI +PT T + P+ P A+ P P A+P PII P
Sbjct: 194 SIIYPTALTITSPIIYPTALAITSPIIYPTALPITSPIIYP 234
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 280 ITFPTECTNSFPLA-PYLNAVNPPKRPPLAIPTQKPIIKP 164
I +PT + P+ P +NPP P A+P PII P
Sbjct: 147 IIYPTALPITSPIIYPTALPINPPIIYPTALPITSPIIYP 186
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3
Query: 180 FCVGMASGGLFGGFTALRYGARGKELVHSVGKVMLQGGGTFGTFMA 317
F GM G L GG+ + R+G R LV S +L +FGTF A
Sbjct: 121 FFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTIL----SFGTFFA 162
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3
Query: 180 FCVGMASGGLFGGFTALRYGARGKELVHSVGKVMLQGGGTFGTFMA 317
F GM G L GG+ + R+G R LV S +L +FGTF A
Sbjct: 634 FFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTIL----SFGTFFA 675
>SB_111| Best HMM Match : Drf_FH1 (HMM E-Value=0.31)
Length = 241
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 203 RSFRRIYCIKVWSKGERVSTFRWKSNASRWRH 298
R+FRR+ C+ + E ++ F ++ +R RH
Sbjct: 38 RAFRRVLCLSSQGESEPIAAFHARTGITRSRH 69
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = -1
Query: 340 QQRIPVPIAIKVPNVP-----PP*SITFPTECTNSFPLAP-YLNAVNPPKRPP 200
Q +P P+ + + P PP S PT +++P +P + PP+ PP
Sbjct: 123 QPLVPTPVTLGGTSAPASTAAPPLSYPAPTSSPHAYPYSPAQVQLSTPPQTPP 175
>SB_3196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/73 (27%), Positives = 24/73 (32%)
Frame = -1
Query: 349 KTNQQRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPII 170
+ ++R P P V P T P VN RP A P +PI
Sbjct: 66 EAGERRADAPRRQNTPVVDPTSGFTSVGADAEDGRYTPIDPLVNKDHRPQSAKPYGRPIT 125
Query: 169 KPIFILSKHEGPW 131
PI L PW
Sbjct: 126 SPIPELRTQNAPW 138
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 343 NQQRIPVPIA-IKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
++ ++P+P ++ PPP I+ P T S P P A P PP P ++P
Sbjct: 324 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRP 380
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 343 NQQRIPVPIA-IKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
++ ++P+P ++ PPP I+ P T S P P A P PP P ++P
Sbjct: 236 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRP 292
>SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39)
Length = 1311
Score = 27.5 bits (58), Expect = 4.1
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFIL 152
+P P +P V P S T CT P P + A P KR P P KP+ + +I
Sbjct: 1123 LPEPEVTPLPEVSPKSSETVAPTCTTESP--PDV-ASTPVKRYPRRTP--KPVSRKHYIW 1177
Query: 151 SKHEGPW 131
+ W
Sbjct: 1178 RREPDLW 1184
>SB_50509| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 223 VNPPKRPPLAIPTQKPIIKP 164
V PP RPPLA Q P+ P
Sbjct: 108 VTPPARPPLAAAQQPPLAVP 127
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKHEG 137
P PPP S P P P L + PP PP T P + P + HEG
Sbjct: 949 PTPPPPTSALPPPIPATQVPPPP-LPPLPPP--PPPVQTTTAPTLPPASCMPTHEG 1001
>SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4)
Length = 296
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 223 VNPPKRPPLAIPTQKPIIKP 164
V PP RPPLA Q P+ P
Sbjct: 222 VTPPARPPLAAAQQPPLAYP 241
>SB_2629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 123 YHNQGPSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVH 263
YH PS FD FMI + G F GF +L+Y G + H
Sbjct: 80 YHRGKPSPFDDRAPLFMISLILLPLLRGFFSGF-SLKYFCVGWAIKH 125
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -1
Query: 328 PVPIAIKVPNVP--PP*SITFPTECTNSFPLAPYLN-AVNPPKRPPLAIPTQKPIIKPI 161
P P + P +P PP S T+ + ++ +N A PP PP A+ T P P+
Sbjct: 245 PPPPPVPPPTIPSVPPGSETYVPPGSATYESMDSVNKAPVPPMTPPPAVVTAPPPAPPL 303
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 301 NVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
NVP P PTE P P PP PP PT P P
Sbjct: 1014 NVPDPLPTDPPTEPPTDPPTPP---PTEPPTPPPTEPPTPPPTDPP 1056
>SB_55538| Best HMM Match : zf-BED (HMM E-Value=1.4)
Length = 1108
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP 287
IPVP+ + +P VPPP
Sbjct: 904 IPVPVGMFIPPVPPP 918
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = -1
Query: 337 QRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQK 179
Q +P+PI VP PPP P P P PP PP P Q+
Sbjct: 672 QILPIPIQTMVPPPPPPPPPPPPP------PPPPPPQPSTPPPPPPSTPPVQQ 718
>SB_55298| Best HMM Match : THAP (HMM E-Value=2.4e-11)
Length = 273
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -3
Query: 254 LFPPCSIP*CSKSAEKTSTSHPYTK 180
++ PC +P C A + HP+ K
Sbjct: 1 MYSPCCVPYCRSRAAQAKNFHPFPK 25
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 26.6 bits (56), Expect = 7.2
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = -1
Query: 322 PIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 143
P VP PPP S T P P L P PP + PTQ P P S
Sbjct: 99 PATTTVP-APPPSSTTAPVNAPAQ--QQPLLQPQRPT--PPSSYPTQPPSRHPTQTQSAI 153
Query: 142 EGP 134
GP
Sbjct: 154 TGP 156
>SB_22151| Best HMM Match : MORN (HMM E-Value=6)
Length = 186
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 194 G*WRSFRRIYCIKVWSKGERVSTFRWKSNASRWRHIWDFYGYWNW 328
G W R ++ WS GER S S +RW + + G W
Sbjct: 89 GRWSGGERWSGVERWSGGERWSGVERWSGVARWSGVARWSGVARW 133
>SB_11570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 72 KNNLQIVLFKMPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMAS 200
K +L + ++PV A YHN G DK F +G AS
Sbjct: 328 KKDLSLAFRQIPVDPADYHNLGFQINDKFYFHTSFPFGLGTAS 370
>SB_41099| Best HMM Match : VWA (HMM E-Value=0)
Length = 3373
Score = 26.2 bits (55), Expect = 9.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 214 PKRPPLAIPTQKPIIKP 164
P PP+ +PT++P+ KP
Sbjct: 960 PTIPPVTVPTKRPVPKP 976
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 310 KVPNVPPP*SITFPTECTNSFPLAPYLNAVNPP--KRPPLAIPTQKPIIKPIF 158
+ P PP ++T P+ + P+ P + PP +PP +IP +P+ P F
Sbjct: 920 QAPPTLPPTTLTTPS-WSQPVPV-PSMYQPQPPGIMQPPTSIPPSQPMAPPSF 970
>SB_29301| Best HMM Match : MFS_1 (HMM E-Value=2.9e-05)
Length = 662
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 186 VGMASGGLFGGFTALRYGAR 245
+GMA GG+ GG YGAR
Sbjct: 554 LGMAIGGVLGGVLVHTYGAR 573
>SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3)
Length = 292
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +3
Query: 165 GFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVGKVMLQGGGTFGTFMAIGTG 329
G M+ G GG+ GG G G ++ + + GGG G M G G
Sbjct: 168 GGMMSMAGGGMGGGMGGGMGGGMEGGMGGGMMEGMQGMGSMGGGMMGGGMGGGMG 222
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 102 MPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMASGGLFGGF 221
+P+ G +Y +G + D ++ + G+C + G + GF
Sbjct: 158 LPIDGVLYMYKGANLQDLQRVRVIEGYCTNIHKGTIRVGF 197
>SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 251 RVSTFRWKSNASRWRHI 301
RVSTF K++ +WRH+
Sbjct: 1595 RVSTFHEKTSPQQWRHV 1611
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,521,151
Number of Sequences: 59808
Number of extensions: 251576
Number of successful extensions: 815
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 678472135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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