Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d10
(394 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-6|CAB02486.3| 82|Caenorhabditis elegans Hypothetical pr... 88 2e-18
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 30 0.51
U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of ... 30 0.51
U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of ... 30 0.51
U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of ... 30 0.51
AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative pota... 30 0.51
AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative pota... 30 0.51
AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative pota... 30 0.51
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 0.68
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 30 0.68
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 0.68
CU457740-2|CAM36332.1| 301|Caenorhabditis elegans Hypothetical ... 28 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 27 6.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 27 6.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 6.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 6.3
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 26 8.4
AF016679-1|AAB66162.1| 539|Caenorhabditis elegans Hypothetical ... 26 8.4
>Z80344-6|CAB02486.3| 82|Caenorhabditis elegans Hypothetical
protein F15D4.3 protein.
Length = 82
Score = 88.2 bits (209), Expect = 2e-18
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +3
Query: 102 MPVP-GAVYHNQG--PSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVG 272
MPVP G H QG PSCF K++MG M+G +G A+G L GGF R G RGK+L+ G
Sbjct: 1 MPVPSGYAAHPQGSQPSCFTKIRMGLMMGAMIGGATGILLGGFMGFRAGMRGKDLLLQTG 60
Query: 273 KVMLQGGGTFGTFMAIGTGIRC 338
K + Q GG+FG FM + G+RC
Sbjct: 61 KTVAQSGGSFGVFMGVAQGLRC 82
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 30.3 bits (65), Expect = 0.51
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 310 KVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPII 170
KV +PP + TFPT +FP P L P P +PT + I+
Sbjct: 813 KVTLLPPLPTFTFPTLAPFTFPTLPTLATTKPSPAP--KVPTLEEIL 857
>U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform e protein.
Length = 544
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 247 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 143
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform c protein.
Length = 576
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 247 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 143
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform d protein.
Length = 562
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 247 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 143
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-1 protein.
Length = 562
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 247 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 143
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-3 protein.
Length = 544
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 247 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 143
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-2 protein.
Length = 576
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 247 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 143
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 0.68
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -1
Query: 322 PIAIKVPNVPPP*S-ITFPTECTNSFPLAPYLNAVNPPKRP 203
P+ + VP PPP S I P P P L + PP P
Sbjct: 764 PVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 29.9 bits (64), Expect = 0.68
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIP----TQKPIIKP 164
P P+ K P PP + T T T + P PY A N P P +P TQ P P
Sbjct: 125 PAPVDQKPPPCIPPTTTT--TTTTTTRPPCPYPPATNTPPAPEPTLPYEYTTQPPATWP 181
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 0.68
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -1
Query: 322 PIAIKVPNVPPP*S-ITFPTECTNSFPLAPYLNAVNPPKRP 203
P+ + VP PPP S I P P P L + PP P
Sbjct: 764 PVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>CU457740-2|CAM36332.1| 301|Caenorhabditis elegans Hypothetical
protein C50E10.2 protein.
Length = 301
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 221 YCIKVWSKGERVSTFRWKSN 280
YCI+ W G R F+W +N
Sbjct: 18 YCIEDWPLGHRYGVFQWATN 37
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*S-------ITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
P P +VP PPP S +T P+ P NPP+ PP IP P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 26.6 bits (56), Expect = 6.3
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLA---PYLNAVNPPKRP-PLAIPT-QKPIIKP 164
P P+ VP+ PPP + T TE + P A P V + P P+ T QKP P
Sbjct: 258 PTPVPNPVPSPPPPPANTTVTEEKTTVPPATDEPAPKTVATTENPKPIDNSTPQKPPNPP 317
Query: 163 IFILSKHEGPWL**TAPGTG 104
+ I+ APGTG
Sbjct: 318 VPIVENTT------KAPGTG 331
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/62 (27%), Positives = 23/62 (37%)
Frame = -1
Query: 349 KTNQQRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPII 170
K + + P +A P PP +I FP S+ P PP IP P
Sbjct: 422 KLVEPKTPTRVAPPPPPSAPP-TIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSP 480
Query: 169 KP 164
+P
Sbjct: 481 QP 482
>Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical
protein F01G10.9 protein.
Length = 445
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 346 TNQQRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRP 203
TN PVP+ P P P I P PLAP A+ PP +P
Sbjct: 318 TNMLHRPVPL----PGAPQPMRIPLPPGAPMPMPLAPPGMAL-PPSQP 360
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect = 6.3
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = -1
Query: 322 PIAIKVPNVPPP*SITFPTECTNSFPLAPY--LN--AVNPPKRPPL 197
PI P P P S P TN+ P P +N A NPP PPL
Sbjct: 464 PINANAPPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPL 509
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNP-PKRPPLAIPTQKPIIK 167
+P P A P+VPP + NS + P P K PP A T+K +++
Sbjct: 198 LPPPPAYTTPDVPPEPMCSLRINFGNSLKIPPRKIIEKPVEKAPPKAKMTRKRMMR 253
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 259 TNSFPLAPY-LNAVNPPKRPPLAIPTQKPIIKP 164
T S PL P L NPP +P P KP I+P
Sbjct: 70 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRP 102
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 259 TNSFPLAPY-LNAVNPPKRPPLAIPTQKPIIKP 164
T S PL P L NPP +P P KP I+P
Sbjct: 292 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRP 324
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFP 245
P P A P PPP + PT+C S P
Sbjct: 136 PTPAAPPPPPPPPPPAPEAPTQCCGSQP 163
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical protein
T13F2.3b protein.
Length = 1076
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -1
Query: 340 QQRIPVPIAIKVP--NVPPP 287
Q RIP+PI +K P PPP
Sbjct: 1028 QYRIPIPIVVKTPVFRQPPP 1047
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical protein
T13F2.3a protein.
Length = 1074
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -1
Query: 340 QQRIPVPIAIKVP--NVPPP 287
Q RIP+PI +K P PPP
Sbjct: 1026 QYRIPIPIVVKTPVFRQPPP 1045
>AF016679-1|AAB66162.1| 539|Caenorhabditis elegans Hypothetical
protein T28C12.5 protein.
Length = 539
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 153 KMKMGFMIGFCVGMASGGLFGGFTALRY 236
+++ GF+ GFCV A G L F + Y
Sbjct: 19 RIQQGFLEGFCVQTAKGDLCDVFHGIPY 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,683,389
Number of Sequences: 27780
Number of extensions: 200491
Number of successful extensions: 685
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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