Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d10
(394 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 36 0.013
At3g08020.1 68416.m00979 PHD finger protein-related contains low... 31 0.28
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 31 0.28
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 31 0.37
At2g33790.1 68415.m04144 pollen Ole e 1 allergen and extensin fa... 31 0.37
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 31 0.37
At5g38560.1 68418.m04662 protein kinase family protein contains ... 30 0.64
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 30 0.64
At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putati... 30 0.64
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 30 0.64
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 0.85
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 29 1.1
At2g17870.1 68415.m02070 cold-shock DNA-binding family protein c... 29 1.1
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 29 1.1
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 1.5
At3g29250.1 68416.m03670 short-chain dehydrogenase/reductase (SD... 28 2.0
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 28 2.6
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 2.6
At1g31250.1 68414.m03825 proline-rich family protein contains pr... 28 2.6
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 28 2.6
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 28 2.6
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 28 2.6
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 27 3.4
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 27 3.4
At3g07540.1 68416.m00900 formin homology 2 domain-containing pro... 27 3.4
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 27 3.4
At3g04800.1 68416.m00518 mitochondrial import inner membrane tra... 27 3.4
At5g56890.1 68418.m07099 protein kinase family protein contains ... 27 4.5
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 27 4.5
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 27 4.5
At3g22070.1 68416.m02785 proline-rich family protein contains pr... 27 4.5
At2g20370.1 68415.m02378 exostosin family protein contains Pfam ... 27 4.5
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 4.5
At1g23540.1 68414.m02960 protein kinase family protein contains ... 27 4.5
At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing ... 27 6.0
At3g07560.1 68416.m00903 glycine-rich protein 27 6.0
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 27 6.0
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 27 6.0
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 27 6.0
At1g68440.1 68414.m07818 expressed protein 27 6.0
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 26 7.9
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 26 7.9
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 26 7.9
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 26 7.9
At3g52100.1 68416.m05717 PHD finger family protein contains Pfam... 26 7.9
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 26 7.9
At2g14050.1 68415.m01563 minichromosome maintenance family prote... 26 7.9
At1g15400.2 68414.m01845 expressed protein ESTs gb|H37295 and gb... 26 7.9
At1g15400.1 68414.m01844 expressed protein ESTs gb|H37295 and gb... 26 7.9
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 35.5 bits (78), Expect = 0.013
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
P P AI P PPP +IT P + P P + PP PP P P I P
Sbjct: 113 PPPPAITPPLSPPPPAITPPPPLATTPPALP-PKPLPPPLSPPQTTPPPPPAITP 166
Score = 33.1 bits (72), Expect = 0.069
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
+P P++ PPP +IT P + PL+P A+ PP PPLA T P + P
Sbjct: 93 LPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPP--PPLA--TTPPALPP 144
>At3g08020.1 68416.m00979 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 764
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 186 HKNQS*NPFSFYQNTKVLGCDKQHPVQAF*IKLFVSYSC 70
HKN S P+ ++T+ CD P ++ F+SY+C
Sbjct: 234 HKNVSSGPYLCPKHTRCHSCDSTVPGNGLSVRWFLSYTC 272
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -1
Query: 295 PPP*SITFPTECTNSFP----LAPYLNAVNPPKRPPLAIPTQKPIIKP 164
PP +T P T + P +AP ++ PP +PP + P P + P
Sbjct: 66 PPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSP 113
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 307 VPNVPPP*SITFPTECTNSFPLAPYLNAVNPPK-RPPLAIPTQKPIIKP 164
+P +PP P L P+L PPK PP+ +P P+ +P
Sbjct: 153 MPKLPPFKGFDHPFPLPPPLELPPFLKKPCPPKYSPPVEVPPPVPVYEP 201
>At2g33790.1 68415.m04144 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245, SP|Q03211 Pistil-specific
extensin-like protein precursor (PELP) {Nicotiana
tabacum}; contains Pfam profile PF01190: Pollen proteins
Ole e I family
Length = 239
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 QRIPVPIAIKVPNVPPP*SITFPTECTNSFPL-APYLNAVNPPKRPPLAIPTQKPIIKPI 161
Q +P+P IK+P +PP + P + P AP PP + P+ +PT PI P+
Sbjct: 41 QHLPLP-PIKLPTLPPAKA---PIKLPAYPPAKAPIKLPTLPPAKAPIKLPTLPPIKPPV 96
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVN--PPKRPPLAIPTQKPIIKP 164
+P I P + PP IT P P N V PP +P +P P++ P
Sbjct: 66 VPPVTTIPPPTLTPPPVITIPPPTLTPPVTNPVTNPVTQYPPTQPSGTVPVPVPVVAP 123
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 292 PP*SITFPTECTNSFPLAPYLNAVNPPK-RPPLAIPTQKPIIKP 164
PP +IT PT + P+ P + + PP PP I P + P
Sbjct: 50 PPVTIT-PTNPATTVPIVPPVTTIPPPTLTPPPVITIPPPTLTP 92
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.9 bits (64), Expect = 0.64
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILS 149
P P P PP S + P+ S P P + + PP P +P +KPI KP S
Sbjct: 163 PTPTTTTSPPPPPATSASPPS----SNPTDP--STLAPPPTPLPVVPREKPIAKPTGPAS 216
Query: 148 KHEGPWL**TAPG 110
+ L ++PG
Sbjct: 217 NNGNNTLPSSSPG 229
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -1
Query: 295 PPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKHEGPWL**TA 116
PP S + PT T + P P + +PP P T P P+ ++ + E P T
Sbjct: 155 PPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTDPSTLAPPPTPLPVVPR-EKPIAKPTG 213
Query: 115 PGTGILNKTI 86
P + N T+
Sbjct: 214 PASNNGNNTL 223
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.9 bits (64), Expect = 0.64
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPII 170
P P + + + PPP +++ P N P P +N ++PP P P P++
Sbjct: 44 PPPPPVNISSPPPPVNLSPPPPPVNLSPPPPPVN-LSPPPPPVNLSPPPPPVL 95
Score = 29.9 bits (64), Expect = 0.64
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
P P+ + P PPP +++ P N P P +N ++PP P L P P+
Sbjct: 55 PPPVNLSPP--PPPVNLSPPPPPVNLSPPPPPVN-LSPPPPPVLLSPPPPPV 103
Score = 29.5 bits (63), Expect = 0.85
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPII 170
P P+ + P PPP ++ P N P P +N ++PP P L P P++
Sbjct: 82 PPPVNLSPP--PPPVLLSPPPPPVNLSPPPPPVN-LSPPPPPVLLSPPPPPVL 131
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
P P+ + P PPP +++ P N P P + ++PP P L P P+
Sbjct: 91 PPPVLLSPP--PPPVNLSPPPPPVNLSPPPPPV-LLSPPPPPVLLSPPPPPV 139
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
P P+ P PPP +I+ P N P P +N ++PP P P P+
Sbjct: 36 PAPLVDLSPP-PPPVNISSPPPPVNLSPPPPPVN-LSPPPPPVNLSPPPPPV 85
>At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putative
/ NADPH-ferrihemoprotein reductase, putative similar to
NADPH-ferrihemoprotein reductase NADPH-cytochrome P450
oxydoreductase isoform 1 [Populus balsamifera subsp.
trichocarpa x Populus deltoides] GI:13183562, SP|P37116
NADPH-cytochrome P450 reductase (EC 1.6.2.4) (CPR)
[Vigna radiata] {Phaseolus aureus}
Length = 692
Score = 29.9 bits (64), Expect = 0.64
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 298 VPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPL 197
VPPP FP CT LA Y + +NPP++ L
Sbjct: 374 VPPP----FPGPCTLGTGLARYADLLNPPRKSAL 403
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 29.9 bits (64), Expect = 0.64
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -1
Query: 343 NQQRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPT 185
N Q+ I +PN P S+T P +S P L PP PP IP+
Sbjct: 14 NSQKPESTTPISIPNPNPNPSLTPPPPQQHSQPPVAPLVPPGPPYAPPAQIPS 66
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.5 bits (63), Expect = 0.85
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = -1
Query: 322 PIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPP--KRPPLAIPTQKPIIKP 164
P P+ PPP T T S PL P L +PP PPL P+ I P
Sbjct: 34 PPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITP 88
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*-SITFPTECTNSFPLAPYLNAVNPPKRPPL--AIPTQKP 176
P P PPP S PT +S P +P N+ +PP PL ++P P
Sbjct: 16 PSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSP 69
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
P P P +PPP FP E PL P + PP PP +P P + P
Sbjct: 45 PPPSPSSPPRLPPPFPALFPPEP----PLPPRFE-LPPPLFPPPPLPRLPPPLLP 94
>At2g17870.1 68415.m02070 cold-shock DNA-binding family protein
contains Pfam domains, PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 301
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +3
Query: 135 GPSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGK-----ELVHSVGKVMLQGGGT 299
G +CF+ ++G M C G + G FGG R G G+ ++ H GGG
Sbjct: 93 GGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGN 152
Query: 300 FG 305
G
Sbjct: 153 SG 154
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIF 158
P +K P PP +P AP PP +PP++ P + P+ P++
Sbjct: 147 PTKAPVKPPTKPPVKPPVYPPT------KAPVKPPTKPPVKPPVSPPAKPPVKPPVY 197
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIF 158
PV +K P PP P + AP PP +PP++ P + P+ P++
Sbjct: 71 PVKPPVKAPVSPPAKPPVKPPVYPPT--KAPVKPPTKPPVKPPVSPPAKPPVKPPVY 125
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNA-VNPPKRPPLAIPTQKPIIKPIF 158
P V PP + PT+ P P + V PP + P+ PT+ P+ P++
Sbjct: 118 PPVKPP--VYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVY 165
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -1
Query: 328 PVPIAIKVPNVPP-P*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIF 158
P +K P PP ++ P + P+ P A P +PP++ PT+ P+ P++
Sbjct: 167 PTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKA---PVKPPVSPPTKPPVTPPVY 221
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIF 158
P +K P PP + P P+ P V PP + P+ PT+ P+ P++
Sbjct: 95 PTKAPVKPPTKPP---VKPPVSPPAKPPVKP---PVYPPTKAPVKPPTKPPVKPPVY 145
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -1
Query: 334 RIPVPIAIKVPNVPPP*SITFPTECTNSFP--LAPYLNAVNPPKRPPLAIPTQKPIIKP 164
+ PV K P PP P +P AP PP +PP+ PT+ P+ P
Sbjct: 97 KAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPP 155
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 247 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIF 158
P P + V PP + P++ P + P+ P++
Sbjct: 64 PHPPAKSPVKPPVKAPVSPPAKPPVKPPVY 93
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPL-AIPTQKPIIKP 164
P P +K P+V PP T+ P P + V PP PP+ + P Q P KP
Sbjct: 110 PTP-TVKPPSVQPP---TYKPPTPTVKP--PTTSPVKPPTTPPVQSPPVQPPTYKP 159
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPI 173
P +K P PP T P V PP PP+ PT P+
Sbjct: 159 PPTSPVKPPTTTPPVKPPTTTPPVQPPTYNPPTTPVKPPTAPPVKPPTPPPV 210
>At3g29250.1 68416.m03670 short-chain dehydrogenase/reductase (SDR)
family protein similar to
3-beta-hydroxysteroiddehydrogenase GI:15983819 from
[Digitalis lanata]; contains Pfam profile: PF00106 short
chain dehydrogenase
Length = 379
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 24 NIGLDVILLYFV*LKDKNNLQ-IVLFKMPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMAS 200
+IGLD +LY + ++ +++ V F + ++ N G C K+ G FC+ +
Sbjct: 50 SIGLDRAILYRYDVTEETDVKNAVKFTIGKLDILFSNDGSFCVLKLLSGIKFLFCLRASK 109
Query: 201 GGLFGGFTAL 230
GG +++
Sbjct: 110 RYAIGGLSSI 119
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
P P +K P PPP + PT+ S P P +PP P P P
Sbjct: 112 PKPPIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPP 166
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -1
Query: 283 SITFPTECT----NSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
++++ +CT + P P + V PPK PP P + P +KP
Sbjct: 20 AVSYACDCTPPKPSPAPHKPPKHPVKPPK-PPAVKPPKPPAVKP 62
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
P P VP+ PP S PT T S P +P PP P ++P+ P + P
Sbjct: 83 PPPPTPSVPSPTPPVSPPPPTP-TPSVP-SPTPPVSPPPPTPTPSVPSPTPPVSP 135
>At1g31250.1 68414.m03825 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
similar to prolin rich protein GB:S44189 GI:433706 from
[Zea mays]
Length = 165
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
P VPP S++ P + S L P + + PP A P+ +P
Sbjct: 43 PPVPPNASLSIPPNSSPSVKLTPPYASPSVKLTPPYASPSVRP 85
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -1
Query: 307 VPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIK---PIFILSKHEG 137
V N PPP + + T P PY+ + +PP PP P+ KP+ K P ++ S
Sbjct: 187 VYNSPPPPYYSPSPKPTYKSPPPPYIYS-SPP--PPYYSPSPKPVYKSPPPPYVYSSPPP 243
Query: 136 PW 131
P+
Sbjct: 244 PY 245
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
+P P + N+ P S+T T P AP+LN+ P P+A T + P
Sbjct: 1908 MPQPRQPLISNIAPTPSVTPATNPGLRSP-APHLNSYRPSSSTPVATATPTSSVPP 1962
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
+P P + N+ P S+T T P AP+LN+ P P+A T + P
Sbjct: 1908 MPQPRQPLISNIAPTPSVTPATNPGLRSP-APHLNSYRPSSSTPVATATPTSSVPP 1962
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -1
Query: 328 PVPIAIKVPNV--PPP*SITFPTECTNSFPLAPYLNAVNPP--KRPPLAIPTQKP 176
P P K P V PPP + P T P PY+ PP K PP P P
Sbjct: 77 PPPYTPKPPTVKPPPPPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTPP 131
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 262 CTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
C S P P + V PPK P A P + P +KP
Sbjct: 26 CDCSDPPKPSPHPVKPPKHP--AKPPKPPTVKP 56
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNS--FPLAPYLNAVNPPKRPPLAIPTQKP 176
P PPP S+ P+ +P PY + + P PP +P P
Sbjct: 70 PPPPPPQSLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPP 114
>At3g07540.1 68416.m00900 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 841
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 217 PPKRPPLAIPTQKPIIKP 164
PP+RPP A+P P++ P
Sbjct: 428 PPQRPPPAMPEPPPLVPP 445
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Frame = -1
Query: 328 PVPIAIKVPNV--PPP*SITFPTECTNS--------FPLAPYLNAVNPPKRPP 200
P P ++P PPP S +FP+ FP P+ NPP+ PP
Sbjct: 77 PSPFVSQIPGSRPPPPSSNSFPSPAYGPPGGAPFQRFPSPPFPTTQNPPQGPP 129
>At3g04800.1 68416.m00518 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
contains Pfam PF02466: Mitochondrial import inner
membrane translocase subunit Tim17
Length = 188
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 177 GFCVGMASGGLFGGFTALRYGARGKELVHSVGKVMLQGG 293
G+C G G G +R RG+ L +++ GG
Sbjct: 66 GYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGG 104
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPL 197
P P++ V ++PP S+ P ++ P NA N K PP+
Sbjct: 151 PAPVSSPVSDIPPIPSVALPPPTPSN---VPPRNASNNHKPPPI 191
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILS 149
P+P + P PPP ++ P S P P L+ PP PP P + + + I S
Sbjct: 1085 PLPPSSLPP--PPPAALFPPLPPPPSQPPPPPLSP--PPSPPPPPPPPSQSLTTQLSIAS 1140
Query: 148 KHEGPW 131
H+ P+
Sbjct: 1141 HHQIPF 1146
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 27.1 bits (57), Expect = 4.5
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPL-AIPTQKPIIKPIFI 155
IP P K P +P P FP NS P P L P+ P + IP KP + +
Sbjct: 150 IPKPELPKFPEIPKPDLPKFP---ENSKPEVPKLMETEKPEAPKVPEIP--KPELPKLPE 204
Query: 154 LSKHEGP 134
+ K E P
Sbjct: 205 VPKLEAP 211
Score = 26.6 bits (56), Expect = 6.0
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -1
Query: 322 PIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPL-AIP-TQKPIIKPIFILS 149
P A KVP +P P P P P + PK P L +P QKP + + +
Sbjct: 186 PEAPKVPEIPKPELPKLPEVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELPKLPEVP 245
Query: 148 KHEGP 134
K E P
Sbjct: 246 KLEAP 250
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIP 188
IP P KVP +P P P P P + PK P + P
Sbjct: 84 IPKPELPKVPEIPKPEETKLPDIPKLELPKFPEIPKPELPKMPEIPKP 131
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
+P P VP VP + FP P P + PK P + P I KP
Sbjct: 294 VPKPELPTVPEVPKSEAPKFPEIPKPELPKIPEVPKPELPKVPEITKPAVPEIPKP 349
>At3g22070.1 68416.m02785 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 178
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -1
Query: 322 PIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPI 161
P I PN PPP + P E + P P L+ P P IP P P+
Sbjct: 102 PAPIVNPNPPPPSTPNPPPEFS---PPPPDLDTTTAPPPPSTDIPIPPPPPAPV 152
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILS 149
P P PN PP S P T + P P + PP PP + P+ P +++
Sbjct: 108 PNPPPPSTPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPPP-PPAPVSASPPLTPPSSVVT 166
>At2g20370.1 68415.m02378 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 619
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 256 NSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
+ FP+ P+ PP + PL + KPI+ P
Sbjct: 82 DKFPIEPHAAPSKPPPKEPL-VTIDKPILPP 111
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -1
Query: 322 PIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPI 161
P +P PPP P T + P A +++ P PP PT+ P PI
Sbjct: 85 PPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPI 138
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -1
Query: 337 QRIPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRP---PLAIPTQKP 176
Q P P A N PP P + TN P+ P A +PP P P PT P
Sbjct: 153 QSPPAPPASDPTNSPP----ASPLDPTNPPPIQPSGPATSPPANPNAPPSPFPTVPP 205
>At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing
protein similar to nucleolin protein; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 495
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 210 FGGFTALRYGARGKEL--VHSVGKVMLQGGGTFGTFM 314
FGGF A YGA G L S + M+ G G T M
Sbjct: 395 FGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGM 431
>At3g07560.1 68416.m00903 glycine-rich protein
Length = 304
Score = 26.6 bits (56), Expect = 6.0
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 201 GGLFGGFTALRYGARGKELVHSVGK----VMLQGGGTFGTF-MAIGTGI 332
GG++GG + R G G L S G M GGT G + M +GTG+
Sbjct: 116 GGMYGGSSMYRGGYGGGGLYGSSGMYGGGAMGGYGGTMGGYGMGMGTGM 164
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKP 164
P P V PPP ++ P P+A VN P P PT P+ P
Sbjct: 24 PAPAPTTV--TPPPTALP-PVTAETPSPIASPPVPVNEPTPAPTTSPTTSPVASP 75
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 26.6 bits (56), Expect = 6.0
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
P P+A P V P T P T P AP +PP + P PT KP
Sbjct: 87 PPPVASPPPPVASPPPATPPPVATP--PPAPL---ASPPAQVPAPAPTTKP 132
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 26.6 bits (56), Expect = 6.0
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
P P+A P V P T P T P AP +PP + P PT KP
Sbjct: 87 PPPVASPPPPVASPPPATPPPVATP--PPAPL---ASPPAQVPAPAPTTKP 132
>At1g68440.1 68414.m07818 expressed protein
Length = 306
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 311 YGYWNWYTLLISFL 352
YG+W W L+I+FL
Sbjct: 41 YGFWKWGALIIAFL 54
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -1
Query: 331 IPVPIAIK-VPNVPPP*SITFPTECT----NSFPLAPYLNAVNPPKRPP 200
IP P + +P +P P + T P T P+ P + VNPP PP
Sbjct: 304 IPTPPTLPTIPLLPTPPTPTLPPIPTIPTLPPLPVLPPVPIVNPPSLPP 352
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 251 FPPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTR 141
FP +IP CSK +++ +K++H TH +KT+
Sbjct: 12 FPLSNIPTCSKKSQQFQKPASLSKSSH-THKPSLKTQ 47
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 307 VPNVPPP*SI-TFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
+P+ PPP I + P T+ P +P +PP PP P P
Sbjct: 407 LPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSP 451
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = -1
Query: 328 PVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 176
P P+ P PPP + P P P + PP PP P P
Sbjct: 432 PPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSP 482
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -1
Query: 295 PPP*SITFPTECTNSFPLAPYLNAVNPP--KRPPLAIPTQKP 176
PPP + + P C + + PY+ + PP PP + P P
Sbjct: 384 PPPYAYSPPPPCPDVYKPPPYVYSSPPPYVYNPPPSSPPPSP 425
>At3g52100.1 68416.m05717 PHD finger family protein contains Pfam
profile PF00628: PHD-finger
Length = 696
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 186 HKNQS*NPFSFYQNTKVLGCDKQHPVQAF*IKLFVSYSC 70
HKN S P+ ++TK C+ P ++ F+ ++C
Sbjct: 247 HKNVSSGPYLCPKHTKCYSCESTVPGNGQSLRWFLGHTC 285
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1
Query: 331 IPVPIAIKVPNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPP 200
+P P K P+ PP S+ P P P L P K PP
Sbjct: 117 VPHPTPKKSPSPPPTPSL--PPPAPKKSPSTPSLPPPTPKKSPP 158
>At2g14050.1 68415.m01563 minichromosome maintenance family protein
/ MCM family protein low similarity to SP|P49736 DNA
replication licensing factor MCM2 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 653
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 265 ECTNSFPLAPYLNAVNPPKRPPLAIPTQK 179
+C + FP+ P L ++N +PP P+Q+
Sbjct: 157 KCKHMFPIFPELESINSIVKPPFC-PSQR 184
>At1g15400.2 68414.m01845 expressed protein ESTs gb|H37295 and
gb|R64895 come from this gene
Length = 140
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPP 200
P V PP C ++F P VNP KRPP
Sbjct: 101 PAVDPPSPRISSCGCCSAFGKNPPGKKVNPRKRPP 135
>At1g15400.1 68414.m01844 expressed protein ESTs gb|H37295 and
gb|R64895 come from this gene
Length = 145
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 304 PNVPPP*SITFPTECTNSFPLAPYLNAVNPPKRPP 200
P V PP C ++F P VNP KRPP
Sbjct: 101 PAVDPPSPRISSCGCCSAFGKNPPGKKVNPRKRPP 135
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,097,801
Number of Sequences: 28952
Number of extensions: 187684
Number of successful extensions: 730
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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