Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d09
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 256  TTGRRLIDEICQIAAYTPKQTYSQ-YIMPYGDLNP 357
            TT  +LID+ C    Y P ++ S  Y+   G L P
Sbjct: 1197 TTVSQLIDDKCDSGQYYPHESCSSFYVCVNGHLVP 1231


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 523 IYHEPRRFSPTMLLEALTRYD 585
           +Y++PR  SP +    L  +D
Sbjct: 227 VYYDPRALSPNLEFVVLEAFD 247


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 454 EISALTDFLDWLEKEKGD 507
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 454 EISALTDFLDWLEKEKGD 507
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 454 EISALTDFLDWLEKEKGD 507
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 454 EISALTDFLDWLEKEKGD 507
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 676 RLTSLLPCIYL 644
           RL  L+PC+YL
Sbjct: 27  RLEKLVPCVYL 37


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 229 TFLVGDRLASQPVREALQYSLPF 161
           T LV  RL ++PV +A     PF
Sbjct: 510 TSLVRGRLVAKPVADARDAPAPF 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,315
Number of Sequences: 336
Number of extensions: 3771
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)