BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12d09 (677 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0366 - 22389591-22390527,22391296-22391429,22391762-223918... 31 1.1 04_01_0288 + 3824337-3826385 29 2.6 12_02_1233 + 27224219-27225607 29 4.5 06_03_0422 + 20612886-20613059,20613170-20613589,20613663-206137... 29 4.5 07_03_0861 + 22072041-22072789,22074065-22074164 28 7.9 06_03_0517 - 21674155-21674334,21674420-21674674,21674829-216749... 28 7.9 03_01_0228 + 1802038-1803265,1804207-1804245,1804638-1804783,180... 28 7.9 01_06_1373 - 36729498-36729950,36730024-36730306,36730592-36730605 28 7.9 >02_04_0366 - 22389591-22390527,22391296-22391429,22391762-22391816, 22392364-22393225,22393342-22393459,22393647-22393737, 22394627-22394670 Length = 746 Score = 30.7 bits (66), Expect = 1.1 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = -1 Query: 314 CFGVYAAIWHISSISLRPVVSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPFTFTSV 135 C + +++ S+ M + +R PG P GF+ AG SVF +S+ FTS+ Sbjct: 484 CILFWTVYSQMTTFSVEQATRMDRHLR---PGAAPGGFAIPAGSLSVFLFLSI-LLFTSL 539 Query: 134 TMAINA*FANSLMNR 90 + A L R Sbjct: 540 NERVLVPAARRLTRR 554 >04_01_0288 + 3824337-3826385 Length = 682 Score = 29.5 bits (63), Expect = 2.6 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +1 Query: 403 YRMLKDMVSHKILKTKSEISALTDFLDWLEKE 498 +++ K SH KT +++S L F DWL+ + Sbjct: 395 HKITKATTSHHWFKTLNDLSTLVGFADWLDMQ 426 >12_02_1233 + 27224219-27225607 Length = 462 Score = 28.7 bits (61), Expect = 4.5 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +1 Query: 274 IDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRVVTVG-RYRMLK 417 IDE+C + + P TYS Y G L + +R+ RYR++K Sbjct: 209 IDEVCSSSGWEPFDTYSVYFR--GSLYVHCQNNCVIRITIANHRYRIIK 255 >06_03_0422 + 20612886-20613059,20613170-20613589,20613663-20613724, 20613834-20613999 Length = 273 Score = 28.7 bits (61), Expect = 4.5 Identities = 14/63 (22%), Positives = 26/63 (41%) Frame = -1 Query: 332 IYWE*VCFGVYAAIWHISSISLRPVVSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 153 + W + A+ H+S L P V++ + FP R ++ + + AS+ L Sbjct: 93 VAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQTAAATAASVVLR 152 Query: 152 FTF 144 F Sbjct: 153 LMF 155 >07_03_0861 + 22072041-22072789,22074065-22074164 Length = 282 Score = 27.9 bits (59), Expect = 7.9 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Frame = +1 Query: 253 DTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLN-PGARRRH 375 D RR+I +IC I+ ++PKQ +S+ ++ + + GAR+ + Sbjct: 226 DALRRRMI-QICYISHWSPKQCFSRRLVWFNEKECSGARKEY 266 >06_03_0517 - 21674155-21674334,21674420-21674674,21674829-21674969, 21675070-21675228,21676578-21676738,21680167-21680302 Length = 343 Score = 27.9 bits (59), Expect = 7.9 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +1 Query: 190 ALAEKPVGLPPGKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDL 351 ALA+K V PP + + G +I + Q+ P QT++++ YG + Sbjct: 25 ALADKLVAAPPPRKNRANPPPAVPGLPIIGNLHQLKEKKPHQTFAKWSETYGPI 78 >03_01_0228 + 1802038-1803265,1804207-1804245,1804638-1804783, 1804891-1804958,1805045-1805147,1805287-1805400 Length = 565 Score = 27.9 bits (59), Expect = 7.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +1 Query: 346 DLNPGARRRHNVRVVTVGRYRMLKDMVSHKILKTKSEISALT 471 +L P R H++RVV + R+ D +I+ T EISA T Sbjct: 145 ELLPKLPRAHDLRVVLLESARLPGDSSDPRIVATIEEISATT 186 >01_06_1373 - 36729498-36729950,36730024-36730306,36730592-36730605 Length = 249 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +1 Query: 466 LTDFLDWLEKEKGDG 510 L DF DW+EKEK +G Sbjct: 129 LEDFEDWIEKEKNEG 143 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,089,211 Number of Sequences: 37544 Number of extensions: 365478 Number of successful extensions: 957 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 931 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 957 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1726796312 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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