Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d09
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    31   0.57 
Z77657-5|CAB01145.2|  381|Caenorhabditis elegans Hypothetical pr...    31   1.00 
Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z83114-7|CAJ76943.1|  525|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z83114-6|CAB63235.1|  589|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U53335-1|AAA96169.1|  431|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    28   5.3  
AF067216-3|AAC17525.1|  430|Caenorhabditis elegans Hypothetical ...    28   5.3  

>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +1

Query: 256 TTGRRLIDEICQIAAYTPKQTY--SQYIMPYGD-----LNPGARRRHNVRV-VTVGRYRM 411
           T+G+   ++IC I   TP+  Y  +  +MP+ D     +NP   R   V++ +T      
Sbjct: 162 TSGKLKFNKICSIRVITPRPNYNPNDLVMPHSDDEEDTMNPNRERLSTVKLRLTPTSQAK 221

Query: 412 LKDMVSHKILKTKSEI 459
           L+ M S  + +  +E+
Sbjct: 222 LEQMQSEDVFQFNAEM 237


>Z77657-5|CAB01145.2|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.8 protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 230 YFPGGRPTGFSASAGGTSVFASISLPFTF 144
           Y P    + +  S GGT VF S+S  FTF
Sbjct: 46  YMPFSETSSYCQSLGGTQVFISLSYEFTF 74


>Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical
           protein F37D6.2c protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = +1

Query: 241 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRVVTVGRYRMLKD 420
           G+D+ TTG  L +  C   ++   +T S Y      +N   R+R  VR+ +  +  +   
Sbjct: 453 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRLGSDPKEELELF 512

Query: 421 MVSHKILKTKSEISALTDFLDWLEKEKGDGSVIL--IYHEP 537
            V  +   T++E    T  L  +  E+GD   IL  I ++P
Sbjct: 513 AVYPQPTNTEAETEEAT--LRKIHLERGDPLPILEDIVYQP 551


>Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical
           protein F37D6.2b protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = +1

Query: 241 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRVVTVGRYRMLKD 420
           G+D+ TTG  L +  C   ++   +T S Y      +N   R+R  VR+ +  +  +   
Sbjct: 450 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRLGSDPKEELELF 509

Query: 421 MVSHKILKTKSEISALTDFLDWLEKEKGDGSVIL--IYHEP 537
            V  +   T++E    T  L  +  E+GD   IL  I ++P
Sbjct: 510 AVYPQPTNTEAETEEAT--LRKIHLERGDPLPILEDIVYQP 548


>Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical
           protein F37D6.2a protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = +1

Query: 241 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRVVTVGRYRMLKD 420
           G+D+ TTG  L +  C   ++   +T S Y      +N   R+R  VR+ +  +  +   
Sbjct: 451 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRLGSDPKEELELF 510

Query: 421 MVSHKILKTKSEISALTDFLDWLEKEKGDGSVIL--IYHEP 537
            V  +   T++E    T  L  +  E+GD   IL  I ++P
Sbjct: 511 AVYPQPTNTEAETEEAT--LRKIHLERGDPLPILEDIVYQP 549


>Z83114-7|CAJ76943.1|  525|Caenorhabditis elegans Hypothetical
           protein K09B11.5b protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 39  IRRASYRSTRLIFCLPTSVHQRVCKLGINGHGD 137
           +RRA  R+++ + CL   +  ++C   +N + D
Sbjct: 34  VRRAMQRNSKKVLCLSVKIDGKICHFTLNSNKD 66


>Z83114-6|CAB63235.1|  589|Caenorhabditis elegans Hypothetical
           protein K09B11.5a protein.
          Length = 589

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 39  IRRASYRSTRLIFCLPTSVHQRVCKLGINGHGD 137
           +RRA  R+++ + CL   +  ++C   +N + D
Sbjct: 98  VRRAMQRNSKKVLCLSVKIDGKICHFTLNSNKD 130


>U53335-1|AAA96169.1|  431|Caenorhabditis elegans Hypothetical
           protein C55C3.4 protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 125 INA*FANSLMNRCW*TKYEPRRPV 54
           +N  FA  ++ +CW  KYE R P+
Sbjct: 346 VNKEFAEFILTKCWPEKYEDRLPM 369


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 157 SEMEANTEVPPALAEKPVGLPPGKYSLIGWDMDTTGRRLIDEI 285
           SEM + T      A K VG PPG  +++  +  + G+RL+D +
Sbjct: 200 SEMTSVTAWVLMHAFKLVGFPPGVVNMVIGEGKSAGQRLVDHV 242


>AF067216-3|AAC17525.1|  430|Caenorhabditis elegans Hypothetical
           protein C35E7.10a protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 125 INA*FANSLMNRCW*TKYEPRRPV 54
           +N  FA  ++ +CW  KYE R P+
Sbjct: 346 VNKEFAEFILTKCWPEKYEDRLPM 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,557,256
Number of Sequences: 27780
Number of extensions: 318702
Number of successful extensions: 839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)