Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d06
(527 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.11
SPBC21B10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 0.99
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 1.3
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 27 1.7
SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces pombe... 26 3.0
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 26 3.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 4.0
SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyce... 25 5.3
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 25 5.3
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 5.3
SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.0
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 25 9.2
SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces pomb... 25 9.2
SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase |Schi... 25 9.2
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.11
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +3
Query: 153 PRQMPEYIEGPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASR 332
P P E P V+ P P +P+ +P + E P + + P V P + EA
Sbjct: 517 PPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAV---PVVPEALS 573
Query: 333 IINQPVITETPCNSVAPRVPSATIITDCTPTV 428
+ PV P P+ P A ++ + P+V
Sbjct: 574 VPQPPVAPVAPEVPSVPQPPVAPVVPE-APSV 604
Score = 28.7 bits (61), Expect = 0.57
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 183 PRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASRIINQP---VI 353
P+ P + E P + P +P + P+ +P V E+P + + + P +
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSV 574
Query: 354 TETPCNSVAPRVPS 395
+ P VAP VPS
Sbjct: 575 PQPPVAPVAPEVPS 588
Score = 28.3 bits (60), Expect = 0.75
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +3
Query: 165 PEYIEGPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYE---ASRI 335
PE P+ P + E P P + P + P+ +P E P + + A +
Sbjct: 539 PEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVV 598
Query: 336 INQPVITETPCNSVAPRVPS 395
P + + P VAP VPS
Sbjct: 599 PEAPSVPQPPVAPVAPEVPS 618
Score = 25.4 bits (53), Expect = 5.3
Identities = 22/92 (23%), Positives = 35/92 (38%)
Frame = +3
Query: 153 PRQMPEYIEGPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASR 332
P P E P V P P P+ P + E P + + P P + +
Sbjct: 592 PPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQ 651
Query: 333 IINQPVITETPCNSVAPRVPSATIITDCTPTV 428
PV+ E P P+ P+A ++ + P+V
Sbjct: 652 RPAVPVVPEAPS---VPQPPAAPVVPE-VPSV 679
Score = 25.0 bits (52), Expect = 7.0
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 165 PEYIEGPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYE--ASRII 338
PE P+ P + E P P +P + P+ P V E+P + + A+ ++
Sbjct: 584 PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVV 643
Query: 339 NQ-PVITETPCNSVAPRVPS 395
+ P + + P V P PS
Sbjct: 644 PEVPSVPQRPAVPVVPEAPS 663
Score = 24.6 bits (51), Expect = 9.2
Identities = 21/80 (26%), Positives = 29/80 (36%)
Frame = +3
Query: 153 PRQMPEYIEGPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASR 332
P P E P V P + P P+ +P + E P + + P V P +
Sbjct: 607 PPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQ 666
Query: 333 IINQPVITETPCNSVAPRVP 392
PV+ E P P VP
Sbjct: 667 PPAAPVVPEVPSVPQPPAVP 686
>SPBC21B10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 198
Score = 27.9 bits (59), Expect = 0.99
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 24 HLSINYLI*RKNMSKFVLLLISMTIFDKTAKSQYLRQQPYSITPRQMPEYIEGPRVYDGP 203
H+ I +I +K +L L+S + + KS+ + Y + P+YI G +YD
Sbjct: 8 HVYIAKIIGKKGEGDKILDLLSK-VNEHVLKSEPFTKTYYFARDAKNPDYIFGLELYDSK 66
Query: 204 RIFEGPRFYDSPRL 245
+ E +P L
Sbjct: 67 EVLENSHKTSNPFL 80
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 324 ASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLANT-IQLMIICNLL 479
+S + N PV T TP + R PS ++ + +++A++ Q+ II N L
Sbjct: 310 SSSVTNSPVDTHTPSTPIMSRPPSMKALSSGVESQDESVASSNFQVPIISNPL 362
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 252 SPRLIEGPRLIESPRVIESPRIYEASRIINQPVITETPCNSVAPRVPSA 398
SP+ I+ P IE+P IESP + + + + ++ S+ + P A
Sbjct: 106 SPQFIDKPSNIETPVKIESPHVSQNNTFQSYSELSPNVETSLTMKTPPA 154
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 234 SPRLIESPRLIEGPRLIESPRVIES 308
SP+ I+ P IE P IESP V ++
Sbjct: 106 SPQFIDKPSNIETPVKIESPHVSQN 130
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 219 PRFYDSPRLIESPRLIEGPRLIES 290
P+F D P IE+P IE P + ++
Sbjct: 107 PQFIDKPSNIETPVKIESPHVSQN 130
>SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces
pombe|chr mitochondrial|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 379 ATLLHGVSVITGWLMILDASY 317
AT LHG+ +I G +++L A+Y
Sbjct: 212 ATGLHGIHIIVGTILLLVATY 232
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 267 EGPRLIESPRVIE-SPRIYEASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLA 443
+GP +I SP+VI S + +A + ++ + +P +S +P S ++D TV ++
Sbjct: 269 KGPNIISSPQVINASSPVRKAGKKKSKKALPTSPLSSSSPDA-SYNSVSDSFHTVAASVP 327
Query: 444 NTI 452
++
Sbjct: 328 ESL 330
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 369 NSVAPRVPSATIITDCTPTVCKNLAN 446
N VAP +P+ T + + T V +NL N
Sbjct: 1660 NLVAPMIPNNTELNEDTSAVSRNLEN 1685
>SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 219
Score = 25.4 bits (53), Expect = 5.3
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +3
Query: 336 INQPVITET---PCNSVAPRVPSATIITDCTPTVCKNLANTIQLMIICNLLQNTKGGPEL 506
I PV+T C ++A + S I D VC + T+Q M I +GGP+
Sbjct: 29 IRDPVLTSEGIEQCEALAKELESKQIPID--GIVCSPMRRTLQTMEIALKKYLAEGGPDK 86
Query: 507 ALQLASP 527
SP
Sbjct: 87 VPVYISP 93
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 404 NYGLHSDRLQELGQHNPVNDHL*FTT 481
N +H +RLQE + ++D+ +TT
Sbjct: 289 NNKMHKERLQEFSSYKNIDDYYDYTT 314
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 25.4 bits (53), Expect = 5.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 57 NMSKFVLLLISMTI--FDKTAKSQYLRQQPYSITPRQMPEY 173
N+ + V+LL+S+ F+K + LR P SIT + Y
Sbjct: 787 NLEESVMLLLSLATSDFEKVDLTSLLRSDPISITVELLQLY 827
>SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 362 TMQQCRSKGSIGHDNYGLHSDRLQELGQHN 451
T + + +G G +NY S++LQE+ H+
Sbjct: 115 TEDEIQDEGYSGFENYVEESEKLQEIYHHS 144
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 363 PCNSVAPRVPSATIITDCTPTVCKNLANTIQLMIICNLLQNTKG 494
P NS+ R T T + C N+A I + + +LLQ+ G
Sbjct: 508 PSNSLVDRTLDQTCTV--TRSGCANIATAIAVELFVSLLQHPNG 549
>SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 316
Score = 24.6 bits (51), Expect = 9.2
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 466 SVIYYRTQRVVPNWL 510
+V+YY TQ ++PN+L
Sbjct: 123 NVLYYLTQSILPNYL 137
>SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 24.6 bits (51), Expect = 9.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 383 WSDTVAWCLGYHRLVDDP*RFVYPRGFYH 297
W D V++CL HR + R+ YH
Sbjct: 171 WKDKVSFCLWSHRFIPACDRYAPSIPLYH 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,097,114
Number of Sequences: 5004
Number of extensions: 42227
Number of successful extensions: 131
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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