Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d04
         (661 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1595|AAF52737.2|  222|Drosophila melanogaster CG18661-P...   109   2e-24
AY119228-1|AAM51088.1|  222|Drosophila melanogaster SD17344p pro...   109   4e-24

>AE014134-1595|AAF52737.2|  222|Drosophila melanogaster CG18661-PA
           protein.
          Length = 222

 Score =  109 bits (263), Expect = 2e-24
 Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
 Frame = +1

Query: 241 HGNENMANQKLIYPAATRNQEPILQVLKRFVTYDCAEDDSPFFLEVASGSGQHLAHFAPH 420
           H +   +  K  +P+A RN +PI + L   V       ++   LE+ASGSGQH    AP 
Sbjct: 9   HIHPRCSFSKRSHPSADRNSQPISEALLSQVD---KTTENLQLLEIASGSGQHAGFLAPL 65

Query: 421 FPNIKFQPTEFDETLLGSIKYYATQCPTKNILLPIQLDICTDLVHYGF--SEESIDYVYN 594
            PNI FQPTE++    GSI  YA  CPT+NI  P  +DI  D   +    +  S DY++N
Sbjct: 66  LPNITFQPTEYERNQFGSIAAYAGDCPTRNIRPPFHVDITRDPGDWEAPPAPASYDYMFN 125

Query: 595 ANMIXISPYECTIGLFKNAG 654
           +NM+ ISP+ C+IGLF+ AG
Sbjct: 126 SNMMHISPWSCSIGLFRAAG 145


>AY119228-1|AAM51088.1|  222|Drosophila melanogaster SD17344p
           protein.
          Length = 222

 Score =  109 bits (261), Expect = 4e-24
 Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
 Frame = +1

Query: 241 HGNENMANQKLIYPAATRNQEPILQVLKRFVTYDCAEDDSPFFLEVASGSGQHLAHFAPH 420
           H +   +  K  +P+A RN +PI + L   V        +   LE+ASGSGQH    AP 
Sbjct: 9   HIHPRCSFSKRSHPSADRNSQPISEALLSQVD---KTSQNLQLLEIASGSGQHAGFLAPL 65

Query: 421 FPNIKFQPTEFDETLLGSIKYYATQCPTKNILLPIQLDICTDLVHYGF--SEESIDYVYN 594
            PNI FQPTE++    GSI  YA  CPT+NI  P  +DI  D   +    +  S DY++N
Sbjct: 66  LPNITFQPTEYERNQFGSIAAYAGDCPTRNIRPPFHVDITRDPGDWEAPPAPASYDYMFN 125

Query: 595 ANMIXISPYECTIGLFKNAG 654
           +NM+ ISP+ C+IGLF+ AG
Sbjct: 126 SNMMHISPWACSIGLFRAAG 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,646,155
Number of Sequences: 53049
Number of extensions: 507193
Number of successful extensions: 1279
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)