Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d04
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   7.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   7.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   7.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 389 EPEATSKKNGLSSSAQS*VTNLF--KTCRIGSWFLVAAGYI 273
           EP +TSKK+G+  S Q    N    +T   G+  +V  G++
Sbjct: 276 EPSSTSKKSGIVRSHQQSCINRVARETKTAGTLAVVVGGFV 316


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 287 QQGTKSQFCKF 319
           Q+GTK QFC F
Sbjct: 490 QRGTKMQFCIF 500


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 421 FPNIKFQPTEFDETLLGSIK 480
           F  +K + T FD TLL  I+
Sbjct: 19  FDQLKTKKTSFDSTLLDCIQ 38


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 595 HYRHNLY-FLLKTHNELNLYIYPIVLVRVYF 506
           H +  LY +   T++++N ++YP+     YF
Sbjct: 277 HVQRLLYVYEDSTYDDINQWVYPLTGCLYYF 307


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -1

Query: 460 FRQ-ILLAEILYLENE 416
           FR+ +LLA +LYL NE
Sbjct: 2   FREFVLLASLLYLGNE 17


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 421 FPNIKFQPTEFDETLLGSIK 480
           F  +K + T FD TLL  I+
Sbjct: 35  FDQLKTKKTSFDSTLLDCIQ 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,872
Number of Sequences: 438
Number of extensions: 3591
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)