Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d04
         (661 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g10380.1 68414.m01169 expressed protein                             28   4.8  
At5g63770.1 68418.m08004 diacylglycerol kinase, putative similar...    27   8.4  

>At1g10380.1 68414.m01169 expressed protein
          Length = 305

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 328 FVTYDCAEDDSPFFLEVASGSGQ 396
           F   DC+ D+SP F  +++GSG+
Sbjct: 122 FTLLDCSVDESPVFTPLSNGSGR 144


>At5g63770.1 68418.m08004 diacylglycerol kinase, putative similar to
           diacylglycerol kinase, theta (diglyceride kinase, DGK-
           theta, DAG kinase theta). [Homo sapiens]
           SWISS-PROT:P52824
          Length = 712

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +1

Query: 292 RNQEPILQVLKRFVTYDCAEDDSPFFLEVASGSGQHLAHFAPHFPNIKFQPTEFDETLLG 471
           RN+   L  +K+F   D   D  P  + + + SG  L  F     N+   P +  E  LG
Sbjct: 319 RNKSAALNFMKKFSLVDLPPDARPLLVFINAKSGGQLGPFLHRRLNMLLNPVQVFE--LG 376

Query: 472 S 474
           S
Sbjct: 377 S 377


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,704,807
Number of Sequences: 28952
Number of extensions: 247695
Number of successful extensions: 529
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)