Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d03
(683 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 231 7e-62
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 203 2e-53
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 175 6e-45
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 175 6e-45
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 147 1e-36
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 123 2e-29
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 109 5e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 89 7e-19
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 60 4e-10
SPBC83.06c |||mitochondrial ribosomal protein subunit L36|Schizo... 28 1.4
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 1.9
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 2.5
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 25 7.7
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 25 7.7
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 7.7
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 231 bits (565), Expect = 7e-62
Identities = 105/133 (78%), Positives = 112/133 (84%)
Frame = +1
Query: 283 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGD 462
+FDV A+G+PLGRIV KL D VPKTA NFRALCTGEKG+GY GS+FHR+IP FM QGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 463 FTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKH 642
FT NGTGGKSIYG F DENF LKH PG+LSMANAGPNTNGSQFFITTV TPWLD KH
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 643 VVFGSVVEGMDVV 681
VVFG V EGMDVV
Sbjct: 125 VVFGEVTEGMDVV 137
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 203 bits (496), Expect = 2e-53
Identities = 94/134 (70%), Positives = 105/134 (78%)
Frame = +1
Query: 280 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGG 459
VYFD+ E LGR+ I L VPKTAENFRAL TGEKGFGY+GS FHR+IP+FM QGG
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88
Query: 460 DFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRK 639
D T +GTGGKSIYG F DENFKL H PG+LSMANAGP++NGSQFFITTV TPWLD
Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGH 148
Query: 640 HVVFGSVVEGMDVV 681
HVVFG V+ G D+V
Sbjct: 149 HVVFGEVLSGYDIV 162
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 175 bits (425), Expect = 6e-45
Identities = 84/137 (61%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Frame = +1
Query: 283 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG----YKGSSFHRIIPDFMC 450
YF ++ DG+ I +L + VPKT +NF +LC G + G YKGS FHR+I +FM
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 451 QGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWL 630
QGGDFT NGTGG+SIYG F DENF+LKH P +LSMANAGPNTNGSQFFITTVPTP L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 631 DRKHVVFGSVVEGMDVV 681
D KHVVFG V++G V
Sbjct: 126 DGKHVVFGKVIQGKSTV 142
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 175 bits (425), Expect = 6e-45
Identities = 89/148 (60%), Positives = 105/148 (70%), Gaps = 7/148 (4%)
Frame = +1
Query: 259 STQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE------KGFGYKGSS 420
ST+P V+ D+ DG LGRI I+L + VPKTAENFR CTGE K GYK S+
Sbjct: 2 STEP--VVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST 59
Query: 421 FHRIIPDFMCQGGDFTNHNGTGGKSIYG-RTFSDENFKLKHTGPGILSMANAGPNTNGSQ 597
FHRII FM QGGDF + +GTG +I+ RTF DENF LKH PG+LSMANAG ++NG Q
Sbjct: 60 FHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQ 119
Query: 598 FFITTVPTPWLDRKHVVFGSVVEGMDVV 681
FFITTVP +LD KHVVFG V+EG D+V
Sbjct: 120 FFITTVPCDFLDGKHVVFGEVIEGYDIV 147
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 147 bits (357), Expect = 1e-36
Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
LG+I+I+L T+ PKT +NF L ++G+ Y G FHR+IPDF+ QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 493 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 669
SIYG F DE + L HTG GILSMANAGPNTN SQFFIT PTPWLD KH +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 670 MDV 678
+ V
Sbjct: 126 LSV 128
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 123 bits (297), Expect = 2e-29
Identities = 66/123 (53%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G I IKL +E PK +NF E G+ Y + FHRII +FM QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 496 IYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 672
I+ + F DE + LKH P +SMAN+GPNTNGSQFFITT TPWLD KH +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 673 DVV 681
DVV
Sbjct: 580 DVV 582
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 109 bits (261), Expect = 5e-25
Identities = 61/123 (49%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G I I+L+TD P NF L ++G+ Y+ + FHR I FM QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 496 IYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 672
I+G+ F DE LKH GI+SMAN G NTNGSQFFI P LD KH +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 673 DVV 681
+V+
Sbjct: 401 NVL 403
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 88.6 bits (210), Expect = 7e-19
Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G I I+L EVPK NF LC +G+ Y G+ HR++P+F+ QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 496 IYGRTFSDENF-KLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVV 663
IYG F+ E +L+ G++ MA N SQFFIT PTP + K +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 59.7 bits (138), Expect = 4e-10
Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
+G +VI L E PKT ENF LC K Y F+ I ++ CQ GD G GG+
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGR 65
Query: 493 SIYG------RTFSDE-NFKLKHTGPGILSMANAGPNTN-------GSQFFITTVPT-PW 627
++ R F E N L H G++SM+ A ++ GSQF IT
Sbjct: 66 CVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEG 125
Query: 628 LDRKHVVFGSVVEGMDVV 681
LD ++ ++G V EG D +
Sbjct: 126 LDERYPIYGQVAEGFDTL 143
>SPBC83.06c |||mitochondrial ribosomal protein subunit
L36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 59
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 120 SKVHIVKYTGRIYLVCDENPNHDT 191
S + V+ GR+Y++C ++P H T
Sbjct: 33 SSCYFVRRKGRLYVLCKKHPRHKT 56
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -2
Query: 325 LYVPMALRQQLHRNKLVYQVESKQNEVLQQSI 230
LYV +A R+++ R++L Q++++ LQQ +
Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQV 465
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 676 HPYLQPQTQILHVFYPTKESELWL*KIETHLYS 578
HP +P T +L+ +P +++ L K++TH+ S
Sbjct: 391 HPPPKPNTGVLNPTFPPEKAPASLEKVDTHVTS 423
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 405 PKTFFTSTQSSKV--LSSFRYFIRVQFYDYTSQWL 307
P FF + +++ L S R F+ FYD+T+++L
Sbjct: 16 PSQFFAGSSLNRLSFLRSNREFLNKAFYDHTTRFL 50
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 360 SFRYFIRVQFYDYTSQWLSVSSYIEI-NLFIRLSRSK 253
+ RY +R+ + T+ W S SY EI +LF R K
Sbjct: 363 AIRYGLRMSPKEITTSWGSPKSYSEIGDLFARYCEKK 399
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 355 KTAENFRALCTGEKGFGYKGSSFHRIIP 438
K A F A+C EKG Y +FH +P
Sbjct: 414 KQALIFDAICLLEKGITYSQHNFHLKLP 441
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,991,648
Number of Sequences: 5004
Number of extensions: 64047
Number of successful extensions: 185
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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