Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d03
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 233 1e-61
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 227 9e-60
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 7e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 103 1e-22
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 90 1e-18
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 87 1e-17
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 81 8e-16
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 75 5e-14
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 57 2e-08
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 31 1.1
SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 29 4.6
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 29 4.6
SB_56070| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_54208| Best HMM Match : fn3 (HMM E-Value=0) 28 8.1
SB_6375| Best HMM Match : DUF1388 (HMM E-Value=7.5) 28 8.1
SB_58547| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_11455| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_1850| Best HMM Match : fn3 (HMM E-Value=7.5e-22) 28 8.1
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 233 bits (570), Expect = 1e-61
Identities = 105/136 (77%), Positives = 113/136 (83%)
Frame = +1
Query: 274 KQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQ 453
K YFD+ G P GRIV++L D VPKTAENFRALCTGEKGFGYKGSSFHR+IP FMCQ
Sbjct: 3 KTTYFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQ 62
Query: 454 GGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLD 633
GGDFT +GTGGKSIYG F+DENF LKHTGPGILSMANAGP TNGSQFF+ T T WLD
Sbjct: 63 GGDFTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLD 122
Query: 634 RKHVVFGSVVEGMDVV 681
KHVVFGSV +GMDVV
Sbjct: 123 GKHVVFGSVKDGMDVV 138
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 227 bits (554), Expect = 9e-60
Identities = 101/135 (74%), Positives = 112/135 (82%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQG 456
+V+FD+T GRIV++L +D VP TAENFR LCT EKGFGYKGSSFHRIIP FMCQG
Sbjct: 138 RVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQG 197
Query: 457 GDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDR 636
GDFT HNGTGGKSIYG F DENF LKHTG G+LSMAN+GPNTNGSQFF+TT T WLD
Sbjct: 198 GDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLDG 257
Query: 637 KHVVFGSVVEGMDVV 681
KHVVFG+V+EG DVV
Sbjct: 258 KHVVFGNVIEGFDVV 272
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 190 bits (462), Expect = 1e-48
Identities = 86/136 (63%), Positives = 101/136 (74%)
Frame = +1
Query: 274 KQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQ 453
K+V+ DV+ G+P GR+++ L D PKT NF AL E+GFGYK S FHR+I +FM Q
Sbjct: 26 KKVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQ 85
Query: 454 GGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLD 633
GGDFTN +GTGG SIYG+ F DENF LKH GPG L MANAG NTNGSQF+ITT+ T WLD
Sbjct: 86 GGDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLD 145
Query: 634 RKHVVFGSVVEGMDVV 681
H FG V+EGMDVV
Sbjct: 146 GSHTCFGKVLEGMDVV 161
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 167 bits (406), Expect = 7e-42
Identities = 91/153 (59%), Positives = 106/153 (69%), Gaps = 18/153 (11%)
Frame = +1
Query: 274 KQVYFDVTADGEPLGRI------VIK----LNTDEVPKT-AENFRAL-----CT--GEKG 399
K+V+FD+T GE GRI +IK L T V NFR CT +KG
Sbjct: 27 KKVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQKG 86
Query: 400 FGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGP 579
FGYK S FHR+I DFM QGGDFT +GTGGKSIYG+ F+DENFKL+H G G LSMANAG
Sbjct: 87 FGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGK 146
Query: 580 NTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDV 678
+TNGSQFFITTV TPWLD +HVVFG V++GM+V
Sbjct: 147 DTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 103 bits (248), Expect = 1e-22
Identities = 48/69 (69%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +1
Query: 475 NGTGGKSIYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVF 651
+GTGG+SI+G F DE + L+H P +SMANAGPNTNGSQFFIT VPTPWLD KH VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 652 GSVVEGMDV 678
G VV+GMDV
Sbjct: 62 GRVVKGMDV 70
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 90.2 bits (214), Expect = 1e-18
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +1
Query: 478 GTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGS 657
G GG+S+YG F DE+F + H G++ MAN G +TNGSQF+IT P PW+D K+V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 658 VVEGMDVV 681
V+EG++V+
Sbjct: 106 VIEGLNVL 113
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +1
Query: 535 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVV 681
+H PG+LSMAN+GPNTNGSQFFITTVPTP LD +HVVFG V++GMDVV
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVV 236
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 81.0 bits (191), Expect = 8e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +1
Query: 475 NGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFG 654
NGTGG+SIYG TF DE F+ KH P +LSMAN GPNTNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 655 SVVEGMDVV 681
V++G ++V
Sbjct: 75 HVIQGEELV 83
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 74.9 bits (176), Expect = 5e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 553 ILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVV 681
ILSMANAGP TNGSQFF+ T T WLD KHVVFGSV +GMDVV
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVV 44
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 562 MANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVV 681
MANAG +TNGSQFFITTV T WLD KHVVFG V+EGMDVV
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVV 40
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/129 (36%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
LG I I+L+ D+ P + NF A + G+ Y G+ FHR+IP FM QGG F
Sbjct: 32 LGEIEIELDADKAPISTANFLAYV--DSGY-YAGTQFHRVIPGFMVQGGGFDADMQQKDT 88
Query: 493 SIYGRTFSDENFKLKHTGPGILSMANAGPNTNG-SQFFITTVPTPWLDR-----KHVVFG 654
+ +D H G L+MA + SQFFI +LD + VFG
Sbjct: 89 QAPIKNEADNGL---HNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFG 145
Query: 655 SVVEGMDVV 681
VV+GMDVV
Sbjct: 146 KVVKGMDVV 154
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 8/46 (17%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHR 429
GR++ +L D+VPKTAENFRALCTGEKG G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +1
Query: 529 KLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFG 654
+ H G +SMAN GPN+NGSQFFI P LD K+ +FG
Sbjct: 298 RCNHNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
+G I I+L E PK NF LC +G+ Y + FHRI+ +GG+ N G G
Sbjct: 12 VGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIV-----KGGE--NIYGQSGF 61
Query: 493 SIYGRT 510
+ G T
Sbjct: 62 KVTGNT 67
>SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 229 IYSAAALRFASTQP-DKQVYFDVT--ADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKG 399
++ +LR AS +P D+ Y V A G P+ + +IKLN K ++ CT E
Sbjct: 90 LFENGSLRIASLRPYDETTYHCVVIKASGLPVRKNIIKLNVSCEGKITQSSHEACT-EDA 148
Query: 400 FGYKGSSFHRIIPDFMCQGGDFTNHNGTG 486
+ HR P + G ++ HN G
Sbjct: 149 IILPCPAKHRTNPRRL-TGVRWSQHNDDG 176
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 413 PLYPKPFSPVHRALKFSAVFGTSSVFNFMTIRPN-GSPSAVT 291
PL+P P P L+ V T + F +RPN PS++T
Sbjct: 189 PLFPSPAMPPRHCLRAEGVTLTGASPTFGDLRPNWAPPSSIT 230
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 367 NFRALCTGEKGFGYKGSSF 423
NF + TG+KGFG++G F
Sbjct: 67 NFSSYSTGQKGFGFEGMDF 85
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 367 NFRALCTGEKGFGYKGSSF 423
NF + TG+KGFG++G F
Sbjct: 132 NFSSYSTGQKGFGFEGMDF 150
>SB_56070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 289 RNKLVYQVESKQNEVLQQSILSH*LKFAEALIPVS*LGFSSQTRYMRP 146
R +L+ + + + ++ +L H L+ A PV +G S+TR RP
Sbjct: 44 RKRLLRVAKDRPRKHVRPEVLGHLLQGAPPKAPVCGIGTQSETRLCRP 91
>SB_54208| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1292
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 77 SGSIITTNNFSSNHFKSTHCEIYWTHIS 160
SG +I NNF+ +H ST + W +S
Sbjct: 10 SGELIAPNNFTVDHVNSTCFTVTWQTVS 37
>SB_6375| Best HMM Match : DUF1388 (HMM E-Value=7.5)
Length = 173
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 289 RNKLVYQVESKQNEVLQQSILSH*LKFAEALIPVS*LGFSSQTRYMRP 146
R +L+ + + + ++ +L H L+ A PV +G S+TR RP
Sbjct: 94 RKRLLRVAKDRPRKHVRPEVLGHLLQGAPPKAPVCGIGTQSETRLCRP 141
>SB_58547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 289 RNKLVYQVESKQNEVLQQSILSH*LKFAEALIPVS*LGFSSQTRYMRP 146
R +L+ + + + ++ +L H L+ A PV +G S+TR RP
Sbjct: 131 RKRLLRVAKDRPRKHVRPEVLGHLLQGAPPKAPVCGIGTQSETRLCRP 178
>SB_11455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 375 SSVYW*KRFWVQGFIIS*NNTRLHVSR--W-RFYQSQRYRRKVYLRAYLLR*EFQIKAYW 545
+ VY K +W Q +I + ++++ W + Y + Y +VY+ + + K YW
Sbjct: 49 NQVYIDKHYWNQVYIDKHYSNQVYIDEHYWNQVYIDKHYSNQVYIDKHYWNQVYIDKHYW 108
Query: 546 AWNFINGECWTE 581
+I+ W +
Sbjct: 109 NQVYIDKHYWNQ 120
>SB_1850| Best HMM Match : fn3 (HMM E-Value=7.5e-22)
Length = 461
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 77 SGSIITTNNFSSNHFKSTHCEIYWTHIS 160
SG +I NNF+ +H ST + W +S
Sbjct: 70 SGELIAPNNFTVDHVNSTCFTVTWQTVS 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,729,101
Number of Sequences: 59808
Number of extensions: 457614
Number of successful extensions: 957
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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