Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d03
(683 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 224 4e-59
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 221 3e-58
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 221 3e-58
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 219 1e-57
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 214 4e-56
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 212 2e-55
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 210 5e-55
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 204 4e-53
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 204 4e-53
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 204 4e-53
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 192 2e-49
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 192 2e-49
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 180 8e-46
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 171 5e-43
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 167 6e-42
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 142 3e-34
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 138 2e-33
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 130 6e-31
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 122 3e-28
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 118 3e-27
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 118 4e-27
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 107 9e-24
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 89 3e-18
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 60 1e-14
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 60 2e-09
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 49 3e-06
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 49 3e-06
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 49 3e-06
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 48 4e-06
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 34 0.10
At1g14390.1 68414.m01706 leucine-rich repeat transmembrane prote... 32 0.31
At1g14800.1 68414.m01769 hypothetical protein 29 2.9
At5g45550.1 68418.m05594 mob1/phocein family protein contains Pf... 29 3.8
At5g20180.2 68418.m02404 ribosomal protein L36 family protein co... 29 3.8
At5g20180.1 68418.m02403 ribosomal protein L36 family protein co... 29 3.8
At3g61270.1 68416.m06857 expressed protein 28 5.0
At4g11590.1 68417.m01857 F-box family protein contains weak hit ... 28 6.6
At3g55550.1 68416.m06168 lectin protein kinase, putative similar... 28 6.6
At3g21820.1 68416.m02751 SET domain-containing protein contains ... 28 6.6
At2g39360.1 68415.m04831 protein kinase family protein contains ... 28 6.6
At5g54380.1 68418.m06771 protein kinase family protein contains ... 27 8.8
At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,... 27 8.8
At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein... 27 8.8
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 224 bits (548), Expect = 4e-59
Identities = 104/142 (73%), Positives = 117/142 (82%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+VYFD+T DG+P GRIV++L TD+ P+TAENFRALCTGEKG G +KGS FHR+I
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P+FMCQGGDFT NGTGG+SIYG F DENF+ KHTGPGILSMANAG NTNGSQFFI TV
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 124
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD KHVVFG VVEG+DVV
Sbjct: 125 KTDWLDGKHVVFGQVVEGLDVV 146
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 221 bits (540), Expect = 3e-58
Identities = 100/138 (72%), Positives = 114/138 (82%), Gaps = 3/138 (2%)
Frame = +1
Query: 277 QVYFDVTAD---GEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFM 447
+VYFD++ G+ GRIVI L D+VP+T ENFRALCTGEKGFGYKGS+FHR+I DFM
Sbjct: 91 KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFM 150
Query: 448 CQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPW 627
QGGDF NGTGGKS+YGRTF DENFKL H GPG+LSMANAGPNTNGSQFFI T+ T W
Sbjct: 151 IQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSW 210
Query: 628 LDRKHVVFGSVVEGMDVV 681
LD +HVVFG V+EGM+VV
Sbjct: 211 LDGRHVVFGQVIEGMEVV 228
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 221 bits (540), Expect = 3e-58
Identities = 103/142 (72%), Positives = 116/142 (81%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+V+FD+T G P G+IV++L TD+ PKTAENFRALCTGEKG G +KGSSFHR+I
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P+FMCQGGDFT NGTGG+SIYG F DENF+ KHTGPGILSMANAG NTNGSQFFI TV
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 125
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD KHVVFG VVEG+DVV
Sbjct: 126 KTDWLDGKHVVFGQVVEGLDVV 147
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 219 bits (536), Expect = 1e-57
Identities = 103/135 (76%), Positives = 109/135 (80%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQG 456
+VYFDV GE GRIV+ L + VPKT ENFRALCTGEK +GYKGSSFHRII DFM QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 457 GDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDR 636
GDFT NGTGG SIYG F DENF LKHTGPGILSMANAGPNTNGSQFFI TV T WLD
Sbjct: 156 GDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDN 215
Query: 637 KHVVFGSVVEGMDVV 681
KHVVFG V+EGM +V
Sbjct: 216 KHVVFGQVIEGMKLV 230
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 214 bits (523), Expect = 4e-56
Identities = 102/142 (71%), Positives = 114/142 (80%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+VYFDV DG+ GR+VI L VPKTAENFRALCTGEKG G YKGS FHRII
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P FM QGGDFT+ NG GG+SIYG+ F+DENFKLKHTGPG+LSMAN+G +TNGSQFFITTV
Sbjct: 93 PSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTV 152
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD +HVVFG VV+GMDVV
Sbjct: 153 TTSWLDGRHVVFGKVVQGMDVV 174
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 212 bits (518), Expect = 2e-55
Identities = 103/142 (72%), Positives = 111/142 (78%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+VYFDV DG+ GRIV+ L VPKT ENFRALCTGEKG G YKGSSFHRII
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P FM QGGDFT+ NG GG+SIYG F+DENFKLKHTGPG LSMANAG +TNGSQFFITTV
Sbjct: 96 PSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTV 155
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD +HVVFG VV GMDVV
Sbjct: 156 TTSWLDGRHVVFGKVVTGMDVV 177
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 210 bits (514), Expect = 5e-55
Identities = 100/142 (70%), Positives = 111/142 (78%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+VYFD+T G+ GRIV++L D P+TAENFRALCTGE+G G YKGSSFHR+I
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P FMCQGGDFT NGTGG+SIYG F DENF KHTGPGILSMANAG NTNGSQFFI T
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTE 125
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD KHVVFG VVEG++VV
Sbjct: 126 KTSWLDGKHVVFGQVVEGLNVV 147
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 204 bits (498), Expect = 4e-53
Identities = 96/142 (67%), Positives = 109/142 (76%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+V+FD++ G P+GRI ++L D P TAENFRALCTGEKG G +KGS FHR+I
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P FMCQGGDFT NGTGG+SIYG F DENF KHTG GILSMAN+GPNTNGSQFFI T
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTD 124
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD KHVVFG VV+G+DVV
Sbjct: 125 KTSWLDGKHVVFGQVVKGLDVV 146
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 204 bits (498), Expect = 4e-53
Identities = 96/142 (67%), Positives = 108/142 (76%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+V+FD+ GR+V++L D P+TA NFRALCTGE G G YKGS+FHRII
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P FMCQGGDFT NGTGG+SIYG F DENFKLKHTGPGILSMAN+GPNTNGSQFFI T
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTE 124
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD KHVVFG VV+G +VV
Sbjct: 125 KTSWLDGKHVVFGKVVDGYNVV 146
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 204 bits (498), Expect = 4e-53
Identities = 97/142 (68%), Positives = 112/142 (78%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+VYFD+ +G P GRI+I L + VPKTAENFR+LCTGEKG G +KGSSFHRII
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
P FM QGGDFT +G GG+SIYG F+DENFKLKHTGPG LSMAN+GP++NGSQFFITTV
Sbjct: 120 PGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTV 179
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
T WLD HVVFG V+ GM+VV
Sbjct: 180 TTSWLDGHHVVFGKVLSGMEVV 201
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 192 bits (467), Expect = 2e-49
Identities = 94/142 (66%), Positives = 106/142 (74%), Gaps = 8/142 (5%)
Frame = +1
Query: 280 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRII 435
V+ DV+ G+P+ RIVI+L D VPKTAENFRALCTGE G G +KGSSFHR+I
Sbjct: 9 VFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVI 68
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
FM QGGDF+N NGTGG+SIYG FSDENF+L H G G+LSMAN GPNTNGSQFFI
Sbjct: 69 KGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFK 128
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
P LD KHVVFG VVEGM V+
Sbjct: 129 RQPHLDGKHVVFGKVVEGMAVI 150
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 192 bits (467), Expect = 2e-49
Identities = 94/142 (66%), Positives = 106/142 (74%), Gaps = 8/142 (5%)
Frame = +1
Query: 280 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRII 435
V+ DV+ G+P+ RIVI+L D VPKTAENFRALCTGE G G +KGSSFHR+I
Sbjct: 9 VFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVI 68
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
FM QGGDF+N NGTGG+SIYG FSDENF+L H G G+LSMAN GPNTNGSQFFI
Sbjct: 69 KGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFK 128
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
P LD KHVVFG VVEGM V+
Sbjct: 129 RQPHLDGKHVVFGKVVEGMAVI 150
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 180 bits (438), Expect = 8e-46
Identities = 89/141 (63%), Positives = 103/141 (73%), Gaps = 8/141 (5%)
Frame = +1
Query: 283 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRIIP 438
+ D++ GE GRIVI+L D VPKTAENFR LCTGEKG G YKG+ FHR+I
Sbjct: 7 FMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIK 66
Query: 439 DFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVP 618
FM QGGD + ++GTGG+SIYG F DENF+LKH G+LSMAN+GPNTNGSQFFITT
Sbjct: 67 GFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTR 126
Query: 619 TPWLDRKHVVFGSVVEGMDVV 681
T LD KHVVFG V +GM VV
Sbjct: 127 TSHLDGKHVVFGRVTKGMGVV 147
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 171 bits (415), Expect = 5e-43
Identities = 81/133 (60%), Positives = 92/133 (69%), Gaps = 5/133 (3%)
Frame = +1
Query: 280 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE-----KGFGYKGSSFHRIIPDF 444
V+FDV+ G P GRI ++L D PKTAENFR CTGE K GYK FHR+I DF
Sbjct: 34 VFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDF 93
Query: 445 MCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTP 624
M Q GDF ++G+G SIYG F DENF KHTGPG+LSMAN+GPNTNG QFFIT
Sbjct: 94 MVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCD 153
Query: 625 WLDRKHVVFGSVV 663
WLD KHVVFG V+
Sbjct: 154 WLDNKHVVFGRVL 166
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 167 bits (406), Expect = 6e-42
Identities = 81/142 (57%), Positives = 100/142 (70%), Gaps = 7/142 (4%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKG-------FGYKGSSFHRII 435
+V+ DV DG+ LGRIVI L VPKT ENFRALCTGEKG YKG+ FHRII
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 615
F+ QGGD + +G SIYG TF DENFK++H+ G+++MAN GP++NGSQFFITTV
Sbjct: 108 SGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTV 167
Query: 616 PTPWLDRKHVVFGSVVEGMDVV 681
WL+ +HVV G V++GMD V
Sbjct: 168 KASWLEGEHVVLGKVIQGMDNV 189
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 142 bits (343), Expect = 3e-34
Identities = 76/124 (61%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
LG I +KL +E PKT ENF C G+ Y FHR+I FM Q GD +GTGG+
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTGDPLG-DGTGGQ 539
Query: 493 SIYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 669
SI+GR F DE K L+H P LSMANAGPNTNGSQFFITTV TPWLD KH VFG VV+G
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG 599
Query: 670 MDVV 681
MDVV
Sbjct: 600 MDVV 603
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 138 bits (335), Expect = 2e-33
Identities = 70/143 (48%), Positives = 91/143 (63%), Gaps = 8/143 (5%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRI 432
QV+ DV+ DG+P +V +L + PKT+ENFRALCTGEKG G YKGS FHRI
Sbjct: 8 QVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRI 67
Query: 433 IPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITT 612
+ Q GDF N NGT G+SIY F DE+ KL+H G+LSM+ A + GS F IT
Sbjct: 68 MKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITF 127
Query: 613 VPTPWLDRKHVVFGSVVEGMDVV 681
P LDR +VVFG +++G +++
Sbjct: 128 RPNQQLDRNNVVFGKLIQGKEIL 150
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 130 bits (315), Expect = 6e-31
Identities = 67/124 (54%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
+G +++ P+T NF L +G+ Y FHRI+ DF+ QGGD T G GG+
Sbjct: 18 MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPTG-TGRGGE 73
Query: 493 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 669
SIYG F DE N +LKHTG GILSMANAGPNTNGSQFFIT P P LD KH +FG V G
Sbjct: 74 SIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRG 133
Query: 670 MDVV 681
M+V+
Sbjct: 134 MEVI 137
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 122 bits (293), Expect = 3e-28
Identities = 65/124 (52%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
LG I ++ DEVPK+AENF ALC G+ Y G+ FHR I FM QGGD G GG
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD-PKGTGKGGT 64
Query: 493 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 669
SI+G+ F+DE LKH G+LSMAN+GPNTNGSQFFIT P L+ + +FG V+ G
Sbjct: 65 SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHG 124
Query: 670 MDVV 681
+V+
Sbjct: 125 FEVL 128
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 118 bits (285), Expect = 3e-27
Identities = 62/120 (51%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G + I+L+ D P+ ENF LC E+G+ Y G +FHR I +FM QGGD T G GG+S
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGES 408
Query: 496 IYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 672
I+G+ F DE N KL H+G G++SMAN+GP+TNGSQFF+ L+ KH VFG VV G+
Sbjct: 409 IWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGL 468
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 118 bits (284), Expect = 4e-27
Identities = 70/144 (48%), Positives = 88/144 (61%), Gaps = 9/144 (6%)
Frame = +1
Query: 277 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 435
+V+FD+T DG+P GRIVI+L D P+TAENFR LCTGE+G G YKGS+F I+
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 436 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKH-TGPGILSMANAGPNTNGSQFFITT 612
PD M GGD N + I+ DE F L H GPGI+SMA ++NGSQF I
Sbjct: 65 PDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHM 116
Query: 613 VPTP-WLDRKHVVFGSVVEGMDVV 681
+D HVV G VVEG+D++
Sbjct: 117 KDYGLQVDGDHVVIGKVVEGLDLM 140
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 107 bits (256), Expect = 9e-24
Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G I ++L E PK+ NF LC +G+ + + FHR+IP F+ QGGD T +GTGG S
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDS 77
Query: 496 IYGRTFSDE-NFKLKHTGPGILSMANAG-PNTNGSQFFITTVPTPWLDRKHVVFGSV 660
IYG F+DE + +L+ + GI++MANA PN+NGSQFF T WLD+KH +FG V
Sbjct: 78 IYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 88.6 bits (210), Expect = 3e-18
Identities = 56/132 (42%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Frame = +1
Query: 313 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
LG IVI L++D+ P T +NF LC K Y G FH + DF Q GD T G GG
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGD 64
Query: 493 SIY-------GRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFIT-TVPTPWLDRKHV 645
SIY R + DE + LKH+ G ++MA+ G N N SQF+ T +LD KH
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHT 124
Query: 646 VFGSVVEGMDVV 681
VFG + EG D +
Sbjct: 125 VFGQIAEGFDTL 136
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 60.5 bits (140), Expect(2) = 1e-14
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = +1
Query: 268 PDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFM 447
P K+ + DV+ DGEP+GRI+I L D+VP F ++ +G+ G Y+ F +I+P ++
Sbjct: 90 PTKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
Query: 448 CQGG 459
GG
Sbjct: 150 QHGG 153
Score = 36.3 bits (80), Expect(2) = 1e-14
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 457 GDFTNHNGTGGKSIYGRTFSDENFKLK---HTGPGILSMANAGPNTNGSQFFITTVPTPW 627
G+ N N G I R S K K G ++ NG++F IT V +P
Sbjct: 184 GEICNVNKAGSVGIVVRDPSKPPPKTKLVARNGKLVVEEEVIAVGPNGTEFVITAVDSPE 243
Query: 628 LDRKHVVFGSVVEGMDVV 681
L+ +V G V+EGM VV
Sbjct: 244 LEDSVLVIGKVLEGMGVV 261
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 59.7 bits (138), Expect = 2e-09
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Frame = +1
Query: 298 ADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPD--FMC--QGGDF 465
+D PLGR+V+ L VP T F+ +CT YK + H+I P F+ QGG
Sbjct: 80 SDSTPLGRVVLGLYGRHVPITVSTFKRMCTSSST-SYKNTPVHKIFPGQYFLAGRQGGGR 138
Query: 466 --TNHNGTGGKSIYGRT--FSDENFKLKHTGPGILSMA----------NAGPNTNGSQFF 603
T G + + T + + F L H G++S+ P+ +F
Sbjct: 139 RDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVEFL 198
Query: 604 ITTVP--TPWLDRKHVVFGSVVEGMDVV 681
ITT P +P LD ++VFG+V+EG+DVV
Sbjct: 199 ITTGPGPSPQLDGGNIVFGTVLEGLDVV 226
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/122 (27%), Positives = 57/122 (46%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G I ++L + P+ + F LC + +KG F R+I +++ Q G + +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 496 IYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMD 675
G+ + KH + + N G N + ITT P P L+ + +VFG V++G D
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 676 VV 681
VV
Sbjct: 206 VV 207
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/122 (27%), Positives = 57/122 (46%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G I ++L + P+ + F LC + +KG F R+I +++ Q G + +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 496 IYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMD 675
G+ + KH + + N G N + ITT P P L+ + +VFG V++G D
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 676 VV 681
VV
Sbjct: 206 VV 207
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/122 (27%), Positives = 57/122 (46%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G I ++L + P+ + F LC + +KG F R+I +++ Q G + +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 496 IYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMD 675
G+ + KH + + N G N + ITT P P L+ + +VFG V++G D
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 676 VV 681
VV
Sbjct: 206 VV 207
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 48.4 bits (110), Expect = 4e-06
Identities = 34/122 (27%), Positives = 53/122 (43%)
Frame = +1
Query: 316 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 495
G + I+L D P + F C + G+ +KG F R++ F+ Q GD + +
Sbjct: 87 GSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAVKDWA 143
Query: 496 IYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMD 675
+ + LKH ++ A G +FFI + L+ K VFG V +G D
Sbjct: 144 LDRKNIDTS---LKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQD 199
Query: 676 VV 681
VV
Sbjct: 200 VV 201
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 33.9 bits (74), Expect = 0.10
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Frame = +1
Query: 352 PKTAEN-FRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGT---------GGKSIY 501
PKT ++ F+ + G GY + F R+ F+ Q D + K I
Sbjct: 53 PKTVDHIFKLVRLG----GYNTNHFFRVDKGFVAQVADVASGRSAPMNEEQRKEAEKKIV 108
Query: 502 GRTFSDENFKLKHTGPGILSMANAG-PNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 669
G FSD +KH G LSM PN+ S F + P LDR++ VFG V +G
Sbjct: 109 GE-FSD----VKHVR-GTLSMGRYDDPNSAQSSFSMLLGNAPHLDRQYAVFGKVTKG 159
>At1g14390.1 68414.m01706 leucine-rich repeat transmembrane protein
kinase, putative similar to putative receptor-like
protein kinase GI:2947063 from [Arabidopsis thaliana]
Length = 747
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = -1
Query: 368 FSAVFGTSSVFNFMTIRPNGSPSAVTSK*TCLSG*VEAKRSAAAEYIVPLTKVRRSIDTG 189
FS+ T +F F + NGSPSA + EAK++ AA K R+ DTG
Sbjct: 293 FSSKKQTVLLFTFNCLSINGSPSAKYQRPVTFCE-NEAKQAVAAVKSDTKDKERKEEDTG 351
Query: 188 IMIGIFI 168
I +G+ I
Sbjct: 352 IELGLVI 358
>At1g14800.1 68414.m01769 hypothetical protein
Length = 384
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 356 KLLRTLELCVLVKKVLGTRVHHFI 427
++L+TL L LVKK L R HH I
Sbjct: 274 RVLKTLNLAPLVKKPLSCRKHHLI 297
>At5g45550.1 68418.m05594 mob1/phocein family protein contains Pfam
profile: PF03637 Mob1/phocein family
Length = 215
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 360 SFRYFIRVQFYDYTSQWLSVSSYIEINLFIRLSRSKTKCCSRVYCPID*SSPKH*YRYHD 181
+ R +R+ + ++WL+V++ N L + T+ C+ CP + PK+ YR+ D
Sbjct: 40 NLREAVRLPPGEDANEWLAVNTVDFFNQVNLLYGTLTEFCTPDNCPTMTAGPKYEYRWAD 99
>At5g20180.2 68418.m02404 ribosomal protein L36 family protein
contains Pfam profile: PF00444 ribosomal protein L36
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 VKYTGRIYLVCDENPNH 185
VK GR+Y++C NP H
Sbjct: 17 VKRRGRVYVICSSNPKH 33
>At5g20180.1 68418.m02403 ribosomal protein L36 family protein
contains Pfam profile: PF00444 ribosomal protein L36
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 135 VKYTGRIYLVCDENPNH 185
VK GR+Y++C NP H
Sbjct: 17 VKRRGRVYVICSSNPKH 33
>At3g61270.1 68416.m06857 expressed protein
Length = 498
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 343 PCSIL*LYVPMALRQQLHRN-KLVYQVESKQNEVLQ 239
PC +L Y P+AL++ L R L QVE +N+ Q
Sbjct: 457 PCEMLPPYDPLALKEVLERKANLTRQVELWENQYFQ 492
>At4g11590.1 68417.m01857 F-box family protein contains weak hit to
Pfam PF00646: F-box domain
Length = 397
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 378 SSKVLSSFRYFIRVQFYDYTSQWLSVSSYIEINLFIRLSRSKTKCCSRVYCP 223
S +V SS + + V F D QW Y F LS S T SRV CP
Sbjct: 69 SFQVRSSLQPRLLVVFIDLNKQWNCEDWY-----FFSLSSSTTSYLSRVTCP 115
>At3g55550.1 68416.m06168 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 684
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 413 PLYPKPFSPVHRALKFSAVFGTSSVFNFMTIRPNGSPSAVT 291
P+ KP V+RAL FS F + V F+T+ +G A+T
Sbjct: 70 PIRFKPIG-VNRALSFSTSFAIAMVPEFVTLGGHGLAFAIT 109
>At3g21820.1 68416.m02751 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 473
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 343 DEVPKTAENFRA---LCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTF 513
D V KT ENF A F+++I C G + N NGT GK +Y +
Sbjct: 2 DSVYKTDENFAADVAALLAPLPTPQLQEYFNKLITSRRCNGIEVKN-NGTIGKGVYANSE 60
Query: 514 SDEN 525
DE+
Sbjct: 61 FDED 64
>At2g39360.1 68415.m04831 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 815
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Frame = -3
Query: 510 GTPVNRLSAGTVVIGKISTLTHEVWYYSMK**T---LVPKTFFTSTQSSKVLSSFRYFIR 340
GTPV L A G I+ V+ Y L P T T + KV F YF+R
Sbjct: 234 GTPVMNLKAVNFSAGGITDDIAPVYVYGTATRLNSDLDPNTNANLTWTFKVEPGFDYFVR 293
Query: 339 VQFYDYTSQWLSVSSYIEINLFIRLSRSKT 250
F + I ++F+ + +T
Sbjct: 294 FHFCNIIVDPFGFERQIRFDIFVNSEKVRT 323
>At5g54380.1 68418.m06771 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 855
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 393 FTSTQSSKVLSSFRYFIRVQFYDYTSQWLSVSSYIEINLFI 271
F T V FRYF+RV F D SQ L+ + NL++
Sbjct: 287 FNVTWVLPVDPDFRYFVRVHFCDIVSQALNT---LVFNLYV 324
>At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,
putative similar to SP|Q03460 Glutamate synthase [NADH],
chloroplast precursor (EC 1.4.1.14) (NADH- GOGAT)
{Medicago sativa}
Length = 2208
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 328 IKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 492
+K+ DEV +E + CTG +G H + M + G +N G GG+
Sbjct: 996 VKIPLDEVEPASEIVKRFCTGAMSYGSISLEAHTTLAMAMNKLGGKSN-TGEGGE 1049
>At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 404
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 457 GDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNT 585
G F + G+GG GR S+ + ++TG G +G T
Sbjct: 206 GGFPGYGGSGGSGYEGRVDSNRYMQPQNTGSGYPPYGGSGYGT 248
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,218,755
Number of Sequences: 28952
Number of extensions: 321408
Number of successful extensions: 797
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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