Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d01
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 160 7e-40
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 160 7e-40
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 145 2e-35
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 144 4e-35
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 131 4e-31
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 107 7e-24
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 98 4e-21
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 90 1e-18
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 68 5e-12
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 39 0.004
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 35 0.044
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 34 0.077
Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical pr... 34 0.10
U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine rece... 28 6.7
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 160 bits (389), Expect = 7e-40
Identities = 81/194 (41%), Positives = 118/194 (60%), Gaps = 11/194 (5%)
Frame = +1
Query: 106 VPSLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETE 285
V SLK+N+G +PAIGLGT+ +SK ++ + A+ GYRH D A VY+ +
Sbjct: 2 VQSLKLNSGYSIPAIGLGTW---------QSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQ 52
Query: 286 QEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW 465
+E+GEA+K ++EG VKRE++FIT+K+WNT H + + I+ L L L Y+DL L+HW
Sbjct: 53 KEVGEALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHW 112
Query: 466 -----------PIGLNADYSHSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLK 612
P G N +SDVD++ETW+ E AQ+ G + IGLSNF Q++RV
Sbjct: 113 PQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWD 172
Query: 613 EGTIKPDAIQIEVH 654
+KP +Q+E+H
Sbjct: 173 AAEVKPACLQVELH 186
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 160 bits (389), Expect = 7e-40
Identities = 81/194 (41%), Positives = 118/194 (60%), Gaps = 11/194 (5%)
Frame = +1
Query: 106 VPSLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETE 285
V SLK+N+G +PAIGLGT+ +SK ++ + A+ GYRH D A VY+ +
Sbjct: 2 VQSLKLNSGYSIPAIGLGTW---------QSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQ 52
Query: 286 QEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW 465
+E+GEA+K ++EG VKRE++FIT+K+WNT H + + I+ L L L Y+DL L+HW
Sbjct: 53 KEVGEALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHW 112
Query: 466 -----------PIGLNADYSHSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLK 612
P G N +SDVD++ETW+ E AQ+ G + IGLSNF Q++RV
Sbjct: 113 PQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWD 172
Query: 613 EGTIKPDAIQIEVH 654
+KP +Q+E+H
Sbjct: 173 AAEVKPACLQVELH 186
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 145 bits (352), Expect = 2e-35
Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 1/186 (0%)
Frame = +1
Query: 103 EVPSLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYET 282
+VP ++NG MP+IGLGT+ + G + V+ A+ GYRH DTA++Y+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEG---------KTVIRNAVLAGYRHIDTATLYQN 54
Query: 283 EQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMH 462
E +IG+A+ EG++KREDIFITTK + + V +A+ +SLK+L LDY+DLYL H
Sbjct: 55 EHQIGDALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAH 114
Query: 463 WPIGLNADYS-HSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAI 639
P D S SDV + WRG E +G+ K IG+SNFN+ Q+ R++ + A
Sbjct: 115 IPASTKDDGSFRSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVPIHAS 174
Query: 640 QIEVHL 657
Q+E+HL
Sbjct: 175 QLELHL 180
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 144 bits (350), Expect = 4e-35
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Frame = +1
Query: 112 SLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 291
S+K++NG +MP IGLGT+ +S ++ V A+ GYR DTASVY+ E+
Sbjct: 7 SIKLSNGVEMPVIGLGTW---------QSSPAEVITAVKTAVKAGYRLIDTASVYQNEEA 57
Query: 292 IGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 471
IG A+K +EEGVVKRE++FITTK W + ++ + +SLKKL L+Y+DLYL H P
Sbjct: 58 IGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPA 117
Query: 472 GLNADYS-HSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIE 648
N D S H + WR + + G+ K +G+SN+N Q+ R L G Q+E
Sbjct: 118 AFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVE 177
Query: 649 VHL 657
+HL
Sbjct: 178 LHL 180
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 131 bits (317), Expect = 4e-31
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 16/197 (8%)
Frame = +1
Query: 112 SLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 291
++ +N+G +MP IG GT+ +N + ++RD A++ GYRH D+A ++ ++E
Sbjct: 6 TVTLNSGYEMPVIGYGTWQ-LPKNLAAE----RVRD----ALEAGYRHIDSALSFKNQEE 56
Query: 292 IGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 471
+ +K + V+RE++F+++K+WNT H R Q I++ L+ Y+DL ++HWP
Sbjct: 57 VAAGIKDWCKIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPF 116
Query: 472 ----------------GLNADYSHSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLER 603
G N +SDVD++ETW+ LEDA R G ++ IGL+NFN Q+E+
Sbjct: 117 GWAEDEPPGERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQ 176
Query: 604 VLKEGTIKPDAIQIEVH 654
V +G IKP +Q+E++
Sbjct: 177 VWTKGLIKPAVLQVEMN 193
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 122 bits (294), Expect = 2e-28
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Frame = +1
Query: 100 MEVPSLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRA-IDVGYRHFDTASVY 276
M V S+ +N G +P GLGT+ + KD+ V +RA +D GYR DTA +Y
Sbjct: 1 MTVDSIPLNTGAQLPLFGLGTW---------QVKDEAELTVALRAALDAGYRLIDTAHLY 51
Query: 277 ETEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYL 456
+ E IG+ + + G +KREDIF+T+KL T H +V + + LK L L+YIDLYL
Sbjct: 52 QNEHIIGKVLHEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYL 111
Query: 457 MHWPIGL------------NADYSHSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLE 600
+H P N + + +++ ++TWR LE + G +K +G+SNF+ QL+
Sbjct: 112 IHCPFPFKHQEGSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQ 171
Query: 601 RVLKEGTIKPDAIQIEVHL 657
+ +KP Q+E H+
Sbjct: 172 ALYDAAEVKPANQQVECHI 190
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 107 bits (257), Expect = 7e-24
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 6/187 (3%)
Frame = +1
Query: 112 SLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 291
S+K+N G D P IGLGTY K Q+ V+ A+ GYR FDTA VY E+E
Sbjct: 2 SIKLNTGYDCPLIGLGTY---------KIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKE 52
Query: 292 IGEAVKMKVEEGVVKREDIFITTKLW-NTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWP 468
IG+A+++ + + +KREDIFITTK+ NT V + +++SL L YID+YL+H+P
Sbjct: 53 IGDALEILLPKHNLKREDIFITTKMHPNTVE---NVKKLVDESLSLLKTSYIDMYLIHYP 109
Query: 469 IGLNADYSHSD----VDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEG-TIKPD 633
+ DY D + TW L + + G ++ +G+S+F + LE + G P
Sbjct: 110 --KSFDYGDQDPMNKTLRIATWNDLWECKNAGKIRSVGVSSFEIRHLEELKDLGKNFPPC 167
Query: 634 AIQIEVH 654
Q+E H
Sbjct: 168 CNQVEYH 174
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 106 bits (254), Expect = 2e-23
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Frame = +1
Query: 118 KMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIG 297
K+ NG+++P + LGTY ++K QL V A+ VGYR FDTA YE E+++G
Sbjct: 3 KLKNGQEIPKLALGTY---------EAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLG 53
Query: 298 EAVKMKVEEGVVKREDIFITTKL--WNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 471
A+K + + EDI++T+K+ +++++ + + +N+SL+ L Y+DL L+H+P
Sbjct: 54 LALKTLLPRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPR 113
Query: 472 GLNA-DYSHSDVDF-METWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQI 645
L+ D + ++ + +TW LE G ++ IG+SN+ +E + TI+P QI
Sbjct: 114 PLDTEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQI 173
Query: 646 EVH 654
E H
Sbjct: 174 EYH 176
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 102 bits (245), Expect = 2e-22
Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Frame = +1
Query: 112 SLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 291
S K+N+G ++P +G GTY K + + + A+ GYR FDTA Y E+E
Sbjct: 12 SQKLNSGYNIPFVGFGTY---------KVTGENVPPAIDAALTAGYRMFDTAKYYLNEKE 62
Query: 292 IGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQA-INDSLKKLGLDYIDLYLMHWP 468
+GEA+K+ + + + R D+F+T+K + E + + +SL+ L DYID+YL+H+P
Sbjct: 63 LGEALKILLPKHGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYP 122
Query: 469 IGLNADYSHSDVDFME----TWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDA 636
++D + DV+ E + LE+A+ G V+ IG+SN+ LE + + P A
Sbjct: 123 KPNDSD--NDDVNNAEYRKIAYEVLEEAKAAGKVRSIGVSNYEIVHLEELKTYAKVPPCA 180
Query: 637 IQIEVH 654
Q+E H
Sbjct: 181 NQLEYH 186
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 98.3 bits (234), Expect = 4e-21
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 1/174 (0%)
Frame = +1
Query: 136 DMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMK 315
+MP IG+GT+ K++ LR V+ GYR DTA VY E +IG ++
Sbjct: 10 NMPLIGIGTWQ--------VQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKL 61
Query: 316 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWP-IGLNADYS 492
+ +KREDI+IT+KL + + ++I +SL L ++Y+DL L+HWP L ++
Sbjct: 62 LPANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENP 121
Query: 493 HSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEVH 654
+ +E+W + + G ++ +G+SNF LE + K+ + P Q+E H
Sbjct: 122 ANKKLRVESWNVMCEMMAEGKLRSVGVSNFEICHLEELKKDSNVVPAVNQVEYH 175
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 92.3 bits (219), Expect = 3e-19
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Frame = +1
Query: 112 SLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDV-VMRAIDVGYRHFDTASVYETEQ 288
+ K ++G +MP IGLG + + + +Q DV + A+ GYR FDTA++Y+ E
Sbjct: 11 AFKFSDGYEMPKIGLG---------ISRIETQQDLDVSIEAALKSGYRQFDTANLYKNET 61
Query: 289 EIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRT--EVAQAINDSLKKLGLDYIDLYLMH 462
+G ++K + + + RED+FITTK+ T + T E + + +SL L DY+DL L+H
Sbjct: 62 FLGNSLKKYLPQFGLTREDVFITTKV-RTLNENTVEETEKQLANSLATLQTDYVDLLLIH 120
Query: 463 WP----IGLNADYSHSDVDFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKP 630
+P G + DY + W+ LE A+ G V+ IG+SN+ L + + I+P
Sbjct: 121 YPRDRDTGNDDDYEINKSRRKIVWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRP 180
Query: 631 DAIQIE 648
Q E
Sbjct: 181 VLNQYE 186
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 89.8 bits (213), Expect = 1e-18
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
Frame = +1
Query: 106 VPSLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAID-VGYRHFDTASVYET 282
+P+ ++N +MP IGLGT D V+ +I GYR DTA Y
Sbjct: 2 IPTTVLSNNVEMPLIGLGT----------THSGGYYHDAVLHSIKKCGYRLIDTAKRYGV 51
Query: 283 EQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMH 462
E+++G AVK V RE++F++TKLW EV A S +KL DY+D+Y++H
Sbjct: 52 EKQLGIAVK----NCSVPREEMFLSTKLWPVDCG-DEVYNAFQTSCEKLQTDYLDMYMIH 106
Query: 463 WPIGLNADYSHSDVDFME-TWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAI 639
P D+ + + E TWR +E V+ IG+SN++ + L+ +L+ +I P A
Sbjct: 107 MP--QLPDWIVNQKETKEKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHAN 164
Query: 640 QIEVH 654
Q+E+H
Sbjct: 165 QVELH 169
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/86 (44%), Positives = 51/86 (59%)
Frame = +1
Query: 115 LKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEI 294
L ++N MPA+GLGT+ +S + + V A+ GY DTAS Y E+ I
Sbjct: 48 LTLSNAHSMPAVGLGTW---------QSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFI 98
Query: 295 GEAVKMKVEEGVVKREDIFITTKLWN 372
G A+K + EGVVKRED+FITTK+ N
Sbjct: 99 GTAIKEVIAEGVVKREDLFITTKVPN 124
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 367 WNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHS-DVDFMETWRGLEDAQ 543
W + + A+ DSLKKL L+Y+DLYL H P + D S + + WR +
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQKIESSVEDIWRQFDAVY 112
Query: 544 RMGIVKGIGLSNFNKQQL 597
+ G+ K +G+SN+N Q+
Sbjct: 113 KAGLAKAVGVSNWNNDQI 130
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 38.7 bits (86), Expect = 0.004
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Frame = +1
Query: 184 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 363
G+ + + + +V AI G + DT Y Q E++ K + R+ +I+TK
Sbjct: 107 GMFGNVEDSIIKIVETAIKQGINYIDTGYWYS--QSRSESILGKALSKI-PRKAYYISTK 163
Query: 364 L--WNTQHRRT------EVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYS-HSDVDFME 516
+ + + RT ++ +++ +SLK+L L YID+ + +AD++ + + E
Sbjct: 164 VGRFELDYARTFDFRADKILESLTNSLKRLQLTYIDICYVQIH---DADFAPNESIVLYE 220
Query: 517 TWRGLEDAQRMGIVKGIGLSNF 582
T + LE A+ G ++ IGL+ +
Sbjct: 221 TLQALEMAKSSGKIRHIGLTGY 242
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 35.1 bits (77), Expect = 0.044
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 304 VKMKVEEGVVKREDIFITTKLW--NTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL 477
VK + ++ ++ D+ K W N + ++E A++ +L KLG DY+++ L+ P+G
Sbjct: 128 VKKEYDKLQSQKIDVEKDCKTWKSNPKFNQSEDFPALDSNLVKLGKDYVNISLVDVPLGR 187
Query: 478 NADYSHSDVDFMET--WRGLED 537
N + V E W+ + D
Sbjct: 188 NVHLGQAPVTNTEETFWKAVFD 209
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 34.3 bits (75), Expect = 0.077
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Frame = +1
Query: 190 VKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQ---EIGEAVKMKVEE--GVVKREDIFI 354
VKS D L++++ V FD V ET + E+ EAVK K +E G +K + I
Sbjct: 1044 VKSLDNTLQEIIENPAPVNDTKFDE-KVKETSRAASEVWEAVKQKTKEGGGTIKTKSKAI 1102
Query: 355 TTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL-NADYSHSDV-DFMETWRG 528
++ + T + +++ + K+G D + + W I + NA +V ++ET G
Sbjct: 1103 KDEIVAALEKLTSIDESVAQA--KVGADAAENDMKRWEIIIENARREIENVLHYLET-EG 1159
Query: 529 LEDAQ 543
E AQ
Sbjct: 1160 EERAQ 1164
>Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical
protein Y57G11C.6 protein.
Length = 482
Score = 33.9 bits (74), Expect = 0.10
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +1
Query: 238 DVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTKLW--NTQHRRTEVAQAIN 411
DV D+ + E ++E + MKV+ V++E K W N+++ ++E A++
Sbjct: 171 DVAKNWMDSIDLAEVKKEFEKLQSMKVD---VEKE-----CKTWKANSKYNQSEDFPALD 222
Query: 412 DSLKKLGLDYIDLYLMHWPIGLNADYSHSDV-DFMET-WRGLEDAQRMGI 555
+L K+ DY+++ + P+G N V D ET W+ + D + + I
Sbjct: 223 SNLLKVEKDYVNISRVEIPLGRNIYIGQVPVKDTEETFWKAVFDKRIVSI 272
>U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 55 protein.
Length = 334
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 519 GLHEVYVRMTIIGI*SNGPVHQIKIYIIQT*FLQ*IVYSLGYFS 388
GL + +T+I S + +K ++I T FLQ I+ SLG+F+
Sbjct: 24 GLTFQLLLLTLILTKSPSILTNLKFFLINTCFLQIILISLGFFT 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,523,716
Number of Sequences: 27780
Number of extensions: 293843
Number of successful extensions: 911
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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