Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12c23
(514 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.092
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 26 0.65
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 26 0.65
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 26 0.86
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 24 3.5
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 4.6
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 6.1
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 23 6.1
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 23 8.0
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 23 8.0
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.1 bits (62), Expect = 0.092
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 111 DGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWCESRR 233
D A QH+ RP+RS + NP GR H C+SRR
Sbjct: 273 DENPAGAQQHLSHRPQRSTRKNP------AGRQHDRCDSRR 307
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 26.2 bits (55), Expect = 0.65
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 285 NGDATVLFVLTRVSETGLSGSRTSND 208
+GD T L +T ++E+G+ S TS D
Sbjct: 194 SGDETDLDAITTLAESGIPSSNTSGD 219
Score = 25.0 bits (52), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 209 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 319
S L + PER SLT++ + + AS L S SS+L
Sbjct: 666 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 702
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 26.2 bits (55), Expect = 0.65
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 285 NGDATVLFVLTRVSETGLSGSRTSND 208
+GD T L +T ++E+G+ S TS D
Sbjct: 195 SGDETDLDAITTLAESGIPSSNTSGD 220
Score = 25.0 bits (52), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 209 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 319
S L + PER SLT++ + + AS L S SS+L
Sbjct: 667 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 703
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.8 bits (54), Expect = 0.86
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 398 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 285
+++L+KKP SL S W + N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 23.8 bits (49), Expect = 3.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 506 SVCTHTPDTQSTTTRAPS 453
SV H PDT+ T + PS
Sbjct: 135 SVIAHNPDTKRTRVKLPS 152
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.4 bits (48), Expect = 4.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 126 EYPQHVCDRPRRSRQVNPHGLVGFQG 203
++P HVC+R R+ +N +V G
Sbjct: 350 QHPLHVCERFERASVINREEIVRKHG 375
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.0 bits (47), Expect = 6.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 500 CTHTPDTQSTTTRAPSVTRSAAVTS 426
CT++ D+ +TTT S + S+ T+
Sbjct: 471 CTYSSDSTTTTTTTKSASTSSHSTT 495
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 23.0 bits (47), Expect = 6.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 512 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST-CPGES 396
TV+ T T +TTT AP+ T + A +T PG++
Sbjct: 35 TVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQT 74
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 22.6 bits (46), Expect = 8.0
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 2 PFSKRTPLLAYGSW-FNRTKI 61
PF ++T ++ +GSW FN ++
Sbjct: 159 PFDQQTCIMKFGSWTFNGDQV 179
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 22.6 bits (46), Expect = 8.0
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3
Query: 99 DPWDDGQEAEYPQHVCDRPRRSRQVNP 179
D WDD + E+ + D P + P
Sbjct: 248 DDWDDEMDGEWEPPMIDNPEYKGEWKP 274
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,870
Number of Sequences: 2352
Number of extensions: 10364
Number of successful extensions: 28
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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