Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12c21
(571 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0483 - 8804021-8804485 47 9e-06
03_02_0484 + 8805053-8805538 47 1e-05
03_02_0478 + 8775892-8776377 46 2e-05
03_02_0485 - 8808139-8808618 45 4e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 45 5e-05
01_01_0229 - 1943473-1943922 45 5e-05
01_01_0231 + 1951047-1951499 44 9e-05
01_01_0227 + 1933247-1933699 41 6e-04
02_02_0077 - 6586638-6587165 40 0.002
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 39 0.003
02_01_0222 + 1450233-1450766 37 0.013
11_02_0041 - 7669692-7670312 33 0.16
06_01_1017 - 7951985-7952425 33 0.21
03_05_0543 - 25404630-25405408,25405461-25405605 31 0.49
02_01_0760 - 5639315-5639685,5640072-5640360 31 0.65
03_02_0320 + 7437528-7437623,7437725-7437772,7438885-7438994,743... 29 2.0
12_02_1174 - 26696869-26698191 29 3.4
12_01_0946 + 9376037-9376318 29 3.4
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 3.4
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228... 28 4.6
10_07_0141 + 13347648-13348331 27 8.0
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 27 8.0
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 27 8.0
01_07_0096 - 41059668-41059886,41059978-41060154,41060575-410607... 27 8.0
>03_02_0483 - 8804021-8804485
Length = 154
Score = 47.2 bits (107), Expect = 9e-06
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 297 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 452
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 453 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
+++ + +GVLTV P+ + +++ IT
Sbjct: 123 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIT 153
>03_02_0484 + 8805053-8805538
Length = 161
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 297 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 452
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 453 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
+++ + +GVLTV P+ + +++ +T
Sbjct: 130 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQVT 160
>03_02_0478 + 8775892-8776377
Length = 161
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Frame = +3
Query: 297 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 452
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 453 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
+++ + +GVLTV P+ A + +++ I+
Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSIQIS 160
>03_02_0485 - 8808139-8808618
Length = 159
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 297 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 452
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 453 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
+++ + +GVLTV P+ + +++ I+
Sbjct: 128 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIS 158
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 44.8 bits (101), Expect = 5e-05
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +3
Query: 231 AMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 395
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 396 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
+ R QF RR+ LPEN D V++ L +GVLTV P+ +A+ I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 44.8 bits (101), Expect = 5e-05
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +3
Query: 231 AMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 395
A AN V T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 38 AFANARVDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 95
Query: 396 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+
Sbjct: 96 RVERSSGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPKAEVKKPEVKAIEIS 148
>01_01_0231 + 1951047-1951499
Length = 150
Score = 44.0 bits (99), Expect = 9e-05
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +3
Query: 231 AMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 395
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 396 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0227 + 1933247-1933699
Length = 150
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 357 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 536
V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 537 VPIT 548
+PI+
Sbjct: 146 IPIS 149
>02_02_0077 - 6586638-6587165
Length = 175
Score = 39.5 bits (88), Expect = 0.002
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Frame = +3
Query: 159 PDDLLTAVITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKT 338
PD+L + PT R Y R + MA DV S + +D+ +P ++ V+
Sbjct: 25 PDELERQLNPPT--RAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEV 80
Query: 339 ADGYVIVEGKHEERQ----DEHG----YISRQ-----FTRRYALPENCNPDTVESRLSSD 479
DG V+ R D+ G Y+ + F RR+ LPE+ + D V + D
Sbjct: 81 EDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEY-KD 139
Query: 480 GVLTV-IAPRTPAATKNERAVPITQTG 557
GVLTV + + P K R V + G
Sbjct: 140 GVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +3
Query: 216 PWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDE-- 389
P + +A + + + + ++ D+ S EE+ V D +++ G+H++ + E
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 390 ----HGYISRQ----FTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATK 524
G+ + + R ALP+ C+ V + L +GVL V P+T K
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPKTEVERK 233
>02_01_0222 + 1450233-1450766
Length = 177
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +3
Query: 318 EEISVKTADGYVI-VEGKHEERQDEHGY-------ISRQFTRRYALPENCNPDTVESRLS 473
EE+ V+ + V+ + G+ +E G S +F R LP N N D V + L
Sbjct: 93 EEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALD 152
Query: 474 SDGVLTVIAPRTPAATKNERAVPIT 548
+ GVLT+ P+ + R +PIT
Sbjct: 153 N-GVLTITIPKDNDRKPHARIIPIT 176
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 408 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNE-RAVPITQTG 557
+F RR+ +P + V +RL DGVLTV P+ P E R V I G
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAG 190
>06_01_1017 - 7951985-7952425
Length = 146
Score = 32.7 bits (71), Expect = 0.21
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 324 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLT 491
++V+ A + E + E +D +++ +F R ALP + + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 492 VIAPRTPAATKNERAVPI 545
V+ P+ PA + R PI
Sbjct: 124 VVVPKEPAPAR-PRTRPI 140
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 31.5 bits (68), Expect = 0.49
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 276 DKFQVNLDVQHFSPEEISVKTAD-GYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 452
+ ++LD F EEI V + G++ G ER SR F + + LP +CN D
Sbjct: 39 NSIHLSLDQLGFKREEIRVLVDNHGHLRTRG---ERPVAGNRWSR-FQKDFQLPADCNVD 94
Query: 453 TVESRLSSDGVLTVIAPRTPA-ATKNERAVPIT 548
+ ++ ++ + + +TP+ T + P+T
Sbjct: 95 GIRAKFENEALTITLPKKTPSPLTPSPTPSPVT 127
>02_01_0760 - 5639315-5639685,5640072-5640360
Length = 219
Score = 31.1 bits (67), Expect = 0.65
Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +3
Query: 243 RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK-----HEER-QDEHG--Y 398
R + + +++++++ +V +++ V DG + + G+ E+R +D G +
Sbjct: 111 RPLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECW 170
Query: 399 ISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 545
+ + LPE+ + + + + DGVL V PR+P ++ V +
Sbjct: 171 AAATYHAGLLLPEDAVAEGITAEVR-DGVLHVTVPRSPERKRSVTEVKV 218
>03_02_0320 +
7437528-7437623,7437725-7437772,7438885-7438994,
7439651-7439735,7439839-7440115,7440296-7440454,
7440563-7440666,7440930-7441168,7441265-7441583,
7441665-7442069,7442157-7442294,7442376-7442555
Length = 719
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 210 YRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADG 347
Y+ W++ AMA + + ++ VN D + SP + T DG
Sbjct: 214 YKKWERAAMAGVSLVADAAEELERNTVNADARMLSPSSSNACTVDG 259
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 288 VNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESR 467
V + + F E++ V+ D + ++ E G +F + LP+NC+ D V +R
Sbjct: 26 VEIALPGFRKEQVRVQV-DNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84
Query: 468 LSSDGVLTVIAPRTPAA 518
D L + P AA
Sbjct: 85 F-DDHKLIITLPLVAAA 100
>12_01_0946 + 9376037-9376318
Length = 93
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 180 VITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGY 350
++T T S RPWK N D T T + + + +++ +P +I + GY
Sbjct: 2 IVTTTSSTTTTRPWKTPTRENHDNQHTPTRSHN---IQANIRQDTPPDIDFRDRHGY 55
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 62 RILK*SKNVSAAIHPGIPTEPPSRSGL-------RTGAYSGRSPDGRHHANDVQRL 208
R++K + I P + PPSRS R+ + G S +HH +D Q L
Sbjct: 811 RVVKDQSSSELRIKPKVADRPPSRSSRSHSIGTDRSSTHEGSSHSKKHHEHDSQSL 866
>03_06_0123 -
31821915-31822094,31822187-31822324,31822413-31822817,
31822897-31823212,31823305-31823543,31823800-31823903,
31823987-31824145,31824326-31824510,31825318-31825427,
31826900-31826947,31827047-31827241,31827354-31827422,
31829521-31829620,31829879-31829940
Length = 769
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 210 YRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTAD 344
Y+ W++ AMA + + ++ VN+D + SP +V T D
Sbjct: 265 YKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVD 309
>10_07_0141 + 13347648-13348331
Length = 227
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 393 GYISRQFTRRYALPENCNPDTVESRLSSD-GVLTVIAPRTPAATKNERA 536
G+I+ +F RRY + ++ P+ E+ L+ D +L ++ A N RA
Sbjct: 31 GFITNKFGRRYGVGDHGTPE--EAALAHDRAILAILGAHASPAALNFRA 77
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 113 PTEPPSRSGLRTGAYSGRSPDGRHHANDVQRLLPAVEADGD 235
P + G R A P+G A D + L+ E+DG+
Sbjct: 60 PRRSGAEQGARRAAAGSEKPEGSEEAEDEEFLVEEYESDGE 100
>04_04_0419 +
25086456-25086768,25087302-25087369,25087458-25087681,
25087929-25088012,25088593-25088806,25089252-25089428,
25089526-25089645,25089865-25089991,25090104-25090130,
25090526-25091007
Length = 611
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 528 RSSWQPESWERSRSARRQRTAEIRQCRGYSFLAER 424
R+ Q +SW ++RS RQ+ + G+ FLA+R
Sbjct: 484 RAIVQGKSWGKTRSQERQQHVRLGLQFGHHFLAQR 518
>01_07_0096 -
41059668-41059886,41059978-41060154,41060575-41060778,
41060874-41061089,41061698-41061961,41062413-41062654,
41062728-41062851,41062852-41062991,41063349-41063397,
41063735-41063891,41063982-41064130,41064267-41064299,
41064497-41064575,41064961-41065040,41065438-41065560
Length = 751
Score = 27.5 bits (58), Expect = 8.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 204 DYYRPWKQMAMAN---RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHE 374
D+Y PW + A +DV ++S K ++V+ F +EI+ DG+V ++ E
Sbjct: 43 DWY-PWGEEAFEKARRKDVPIFLSSMKCHV---MEVESFENDEIAKILNDGFVSIKVDRE 98
Query: 375 ERQD 386
ER D
Sbjct: 99 ERPD 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,094,039
Number of Sequences: 37544
Number of extensions: 308406
Number of successful extensions: 1231
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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