Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12c17
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   3.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   3.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 204 PHKITFNTGVFTTAIFCLFFTIN-YFCRKTLTAEY 103
           P K +    + T AIF +F + N Y C+     EY
Sbjct: 174 PRKSSLVQLILTQAIFLMFVSYNIYVCQTVSNFEY 208


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 204 PHKITFNTGVFTTAIFCLFFTIN-YFCRKTLTAEY 103
           P K +    + T AIF +F + N Y C+     EY
Sbjct: 100 PRKSSLVQLILTQAIFLMFVSYNIYVCQTVSNFEY 134


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 500 FLHKIQFQVNVDSKY 456
           FLH+ ++Q+ VDS Y
Sbjct: 130 FLHENKYQLEVDSGY 144


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 450 RFIF*VNIYLKLYLMQKTQRYFYVEI 527
           R++F  +  L  Y +Q+ Q Y Y +I
Sbjct: 139 RYVFVTSYLLFDYFVQRNQEYKYYQI 164


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 500 FLHKIQFQVNVDSKY 456
           FLH+ ++Q+ VDS Y
Sbjct: 130 FLHENKYQLEVDSGY 144


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 500 FLHKIQFQVNVDSKY 456
           FLH+ ++Q+ VDS Y
Sbjct: 130 FLHENKYQLEVDSGY 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,943
Number of Sequences: 336
Number of extensions: 3428
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)