Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12c14
         (332 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2GXK8 Cluster: Putative uncharacterized protein; n=4; ...    31   6.7  
UniRef50_Q6JKF7 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  
UniRef50_Q1EI05 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_Q2GXK8 Cluster: Putative uncharacterized protein; n=4;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Chaetomium globosum (Soil fungus)
          Length = 606

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 212 DKTSSHRVHVKIXLS*FIYYNIVDCFFTAAQYTL*NYC 99
           D T     HV I L  F+Y +I+DC  TA  Y++  +C
Sbjct: 340 DLTGEAGTHVAIALFTFLYVDIIDC--TATVYSMARFC 375


>UniRef50_Q6JKF7 Cluster: Putative uncharacterized protein; n=1;
           Neodiprion sertifer NPV|Rep: Putative uncharacterized
           protein - Neodiprion sertifer NPV
          Length = 388

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 116 TL*NYC-QDFVXYINKQKTNFITYNNLIK 33
           TL +YC  DF  ++N  K N I YNN I+
Sbjct: 220 TLHHYCIDDFKEHLNMNKCNKIVYNNFIR 248


>UniRef50_Q1EI05 Cluster: Putative uncharacterized protein; n=1;
           uncultured organism|Rep: Putative uncharacterized
           protein - uncultured organism
          Length = 101

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 202 LVLSSCRGSHFDSGSDKNLLVDLKENVTVHLEAINGTPIYRLI 330
           + L S  G    +G+ K+  ++LKE   ++   +N TP YRL+
Sbjct: 56  VTLPSVSGGGLTAGTTKDYAIELKEGEYLYSCPLNPTPDYRLV 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,544,633
Number of Sequences: 1657284
Number of extensions: 4415719
Number of successful extensions: 9612
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9611
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)