Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12c14
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   2.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   5.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   7.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 95  DFVXYINKQKTNFITYNNL 39
           DF  ++     NF TY+N+
Sbjct: 94  DFAYFLEVSNNNFKTYSNV 112


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 46  LYVMKFVFCLFIYXTKS*Q*FQSVYCAAV 132
           L  + FVFC FIY       + SV+ A++
Sbjct: 140 LLQLVFVFCYFIYLFTVYYIYYSVHEASI 168


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 184 TWTRWLLVLSSC 219
           TWTR L  L SC
Sbjct: 93  TWTRLLKNLESC 104


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 226 SHFDSGSDKNLLVDL 270
           S FD   D+NL  DL
Sbjct: 511 SFFDEDQDRNLASDL 525


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,790
Number of Sequences: 336
Number of extensions: 1258
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)