BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12c14 (332 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014296-1386|AAF50475.2| 491|Drosophila melanogaster CG7476-PA... 28 3.4 AE014296-1385|AAO41271.1| 475|Drosophila melanogaster CG7476-PB... 28 3.4 >AE014296-1386|AAF50475.2| 491|Drosophila melanogaster CG7476-PA, isoform A protein. Length = 491 Score = 27.9 bits (59), Expect = 3.4 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = +3 Query: 39 EVIVCNEICFLF---VYIX-NKILTIISKCVLCC 128 E+++ ICF+ VY+ K+ + KC++CC Sbjct: 224 EILIITMICFVLTIAVYLYIKKLRNVTGKCIVCC 257 >AE014296-1385|AAO41271.1| 475|Drosophila melanogaster CG7476-PB, isoform B protein. Length = 475 Score = 27.9 bits (59), Expect = 3.4 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = +3 Query: 39 EVIVCNEICFLF---VYIX-NKILTIISKCVLCC 128 E+++ ICF+ VY+ K+ + KC++CC Sbjct: 208 EILIITMICFVLTIAVYLYIKKLRNVTGKCIVCC 241 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,735,925 Number of Sequences: 53049 Number of extensions: 198670 Number of successful extensions: 535 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 528 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 535 length of database: 24,988,368 effective HSP length: 75 effective length of database: 21,009,693 effective search space used: 735339255 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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