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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12c10
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome re...   278   3e-75
U88170-1|AAB42248.2|  438|Caenorhabditis elegans Hypothetical pr...    87   1e-17
U12965-4|AAA20608.1|  414|Caenorhabditis elegans Proteasome regu...    81   8e-16
AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome re...    36   0.018
D38541-1|BAA07544.1|  284|Caenorhabditis elegans CeTMII protein.       31   0.50 
D38540-1|BAA07543.1|  284|Caenorhabditis elegans CeTMI protein.        31   0.50 
D38539-2|BAA07541.1|  284|Caenorhabditis elegans CeTMII protein.       31   0.50 
D38539-1|BAA07540.1|  284|Caenorhabditis elegans CeTMI protein.        31   0.50 
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    31   0.50 
AL132877-4|CAC70112.1|  284|Caenorhabditis elegans Hypothetical ...    31   0.50 
AL132877-2|CAC70113.2|  193|Caenorhabditis elegans Hypothetical ...    31   0.50 
AL132877-1|CAC70114.1|  284|Caenorhabditis elegans Hypothetical ...    31   0.50 
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern...    31   0.87 
Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL132877-3|CAC70115.1|  256|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF298180-1|AAG10302.1|  256|Caenorhabditis elegans tropomyosin i...    29   2.7  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    29   3.5  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF400666-1|AAL28025.1|  481|Caenorhabditis elegans CUX-7 protein.      29   3.5  
AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical ...    29   3.5  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    29   3.5  
AC006605-6|AAK85446.2|  495|Caenorhabditis elegans Clk-2 upstrea...    29   3.5  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical...    28   6.1  
AF040655-9|AAB95038.1|  288|Caenorhabditis elegans Hypothetical ...    28   6.1  
AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical ...    28   6.1  
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl...    27   8.1  

>AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 2 protein.
          Length = 443

 Score =  278 bits (681), Expect = 3e-75
 Identities = 129/155 (83%), Positives = 145/155 (93%)
 Frame = +1

Query: 154 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 333
           YE PIP+R+GKKK+ +KGPDAA KLP VTPH RCRLKLLK ERIKDYLLME+EFI+NQER
Sbjct: 28  YEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQER 87

Query: 334 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 513
           LKPQEE+ EEER+KVD+LRGTPM+VG+LEEIIDD HAIVST+VGSEHYV+I+SFVDK+QL
Sbjct: 88  LKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQL 147

Query: 514 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKA 618
           EPGCSVLLNHK HAV+GVL DDTDPMVSVMKLEKA
Sbjct: 148 EPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182


>U88170-1|AAB42248.2|  438|Caenorhabditis elegans Hypothetical
           protein C10G11.8 protein.
          Length = 438

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 64/163 (39%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
 Frame = +1

Query: 169 PTRVGKK---KRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQ--ER 333
           PT    K   K   +G + A KLP V P  +C ++LLK+ RI DYL +E+EFI  Q    
Sbjct: 15  PTHAAMKIAMKSGRRGIENANKLPTVAPKRQCLVRLLKMNRIHDYLQLEKEFITRQTSRH 74

Query: 334 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD-NHAIVSTSVGS--EHYVSILSFVDK 504
            +P   +   E+  V  LRGTP ++  + E+ DD  HA+V    GS  E YV ILS VDK
Sbjct: 75  GRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVE-GSRREWYVPILSIVDK 133

Query: 505 DQLEPGCSVLLN----HKV--HAVVGVLGDDTDPMVSVMKLEK 615
           D L     V++      K    A+VGVL D  D      K+EK
Sbjct: 134 DLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEK 176


>U12965-4|AAA20608.1|  414|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 3 protein.
          Length = 414

 Score = 80.6 bits (190), Expect = 8e-16
 Identities = 39/116 (33%), Positives = 72/116 (62%)
 Frame = +1

Query: 259 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN 438
           +KL  LER   +L + E++I+ + R    E+++   + +V  ++  P+ +G   E +D N
Sbjct: 38  IKLTTLERQLAHLQVMEDYIKLETR--NLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQN 95

Query: 439 HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 606
           HAIV ++ GS +YV +LS +D++ L+PGCSV L+   +A+V VL  + D  + +++
Sbjct: 96  HAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLR 151


>AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 5 protein.
          Length = 430

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--DNH---------- 441
           +M  E  R        +E+I+E   ++   +  P  V N+ E++D  DN           
Sbjct: 47  IMRSEVQRINHSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLD 106

Query: 442 ------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVM 603
                 A++ TS  + +++ ++  VD D+L+PG  V +N   + ++  L  + D  V  M
Sbjct: 107 AQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAM 166

Query: 604 KLEK 615
           ++++
Sbjct: 167 EVDE 170


>D38541-1|BAA07544.1|  284|Caenorhabditis elegans CeTMII protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384
           L+EEE  R +ERLK   EK+EE    VD+
Sbjct: 94  LLEEELERAEERLKIATEKLEEATHNVDE 122


>D38540-1|BAA07543.1|  284|Caenorhabditis elegans CeTMI protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384
           L+EEE  R +ERLK   EK+EE    VD+
Sbjct: 94  LLEEELERAEERLKIATEKLEEATHNVDE 122


>D38539-2|BAA07541.1|  284|Caenorhabditis elegans CeTMII protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384
           L+EEE  R +ERLK   EK+EE    VD+
Sbjct: 94  LLEEELERAEERLKIATEKLEEATHNVDE 122


>D38539-1|BAA07540.1|  284|Caenorhabditis elegans CeTMI protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384
           L+EEE  R +ERLK   EK+EE    VD+
Sbjct: 94  LLEEELERAEERLKIATEKLEEATHNVDE 122


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
            protein Y39B6A.30 protein.
          Length = 1408

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +1

Query: 184  KKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE-RLKPQEEKIE 360
            +++ K K  +A  +  ++ P  R R++ +K E  ++ +  E E ++ +E RLK +EEK++
Sbjct: 882  RREEKCKEKEAEEENEKLIPE-RKRMEAIKEE--EERVKAEREKVKKEEERLKAEEEKVK 938

Query: 361  EERSKV 378
             E+ KV
Sbjct: 939  VEKEKV 944



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +1

Query: 175  RVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIR-NQERLKPQEE 351
            RV  ++ K K  +  LK  +            + E++K      +E ++  +ERLK +EE
Sbjct: 915  RVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERLKAEEE 974

Query: 352  KIEEERSKV 378
            K++ E+ KV
Sbjct: 975  KVKIEKEKV 983


>AL132877-4|CAC70112.1|  284|Caenorhabditis elegans Hypothetical
           protein Y105E8B.1d protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384
           L+EEE  R +ERLK   EK+EE    VD+
Sbjct: 94  LLEEELERAEERLKIATEKLEEATHNVDE 122


>AL132877-2|CAC70113.2|  193|Caenorhabditis elegans Hypothetical
           protein Y105E8B.1b protein.
          Length = 193

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384
           L+EEE  R +ERLK   EK+EE    VD+
Sbjct: 3   LLEEELERAEERLKIATEKLEEATHNVDE 31


>AL132877-1|CAC70114.1|  284|Caenorhabditis elegans Hypothetical
           protein Y105E8B.1a protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384
           L+EEE  R +ERLK   EK+EE    VD+
Sbjct: 94  LLEEELERAEERLKIATEKLEEATHNVDE 122


>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
           (werner's syndrome) relatedprotein 1 protein.
          Length = 1056

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
 Frame = +1

Query: 181 GKKKRKAKGPDAALKLPQVTPH-TRCRLKLLKLERIKDYL-LMEEEFIRN--QERLKPQE 348
           GKK++ A          Q T   T    K+L   +I++Y    E E + N  ++ +    
Sbjct: 747 GKKEKAAPSTVPGASRSQSTKSSTEIPTKILGANKIREYEPANENEQLMNLKKQEVTGLP 806

Query: 349 EKIEEERSKVDDLRGTPMSVGNLEEI 426
           EKI++ RS++DD+R   + + N+ E+
Sbjct: 807 EKIDQLRSRLDDIR---VGIANMHEV 829


>Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical
           protein W02A2.6 protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 262 KLLKLERIKDY-LLMEEEFIRNQERLKPQEEKIEEERSK 375
           KL +L + K + LLM E F RNQE L+ +E+K    RSK
Sbjct: 89  KLKELMKKKSFILLMAERFDRNQE-LQRKEDKFARLRSK 126


>AL132877-3|CAC70115.1|  256|Caenorhabditis elegans Hypothetical
           protein Y105E8B.1c protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +1

Query: 295 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435
           +L+EE+  R ++RLK    K+E+     D+   +  ++ N  ++ DD
Sbjct: 65  VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111


>AF298180-1|AAG10302.1|  256|Caenorhabditis elegans tropomyosin
           isoform IV protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +1

Query: 295 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435
           +L+EE+  R ++RLK    K+E+     D+   +  ++ N  ++ DD
Sbjct: 65  VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
            T28C6.9 protein.
          Length = 1861

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +1

Query: 223  KLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQ-EEKIEEERSKVDDLR 390
            KL Q+      R++ L+ ++  +   M E+ +   E +K Q E+K+ E R ++DDL+
Sbjct: 1447 KLTQLRNELTARIEQLESQKSNEQAQMSEK-LSQVESMKVQIEQKLYETREELDDLK 1502


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +1

Query: 271 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435
           KL+  K+  L E+   R Q+  K  +   ++  S +DD       +  LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +1

Query: 271 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435
           KL+  K+  L E+   R Q+  K  +   ++  S +DD       +  LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261


>AF400666-1|AAL28025.1|  481|Caenorhabditis elegans CUX-7 protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 402
           L E+   R + R + +EEK+++E SK+ +L   P+
Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398


>AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical
           protein C17E7.5 protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +1

Query: 208 PDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEF 315
           PDA L+L Q++P    R++ L + ++ +  + +EEF
Sbjct: 240 PDAILRLKQISPQFLQRIRSLLVMKLIELKITDEEF 275


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +1

Query: 346  EEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ-LEPG 522
            EE +E E   +DD+     + GNLE   D    +   S+ +E   ++  +V++ + L  G
Sbjct: 2739 EETVETEEMIMDDMMDLYYTPGNLEIARDTFDKLEIASIMNEILYTVDQYVEETEILFRG 2798

Query: 523  CSVLLNHKVHAVVGV 567
             S   + +  AV+ +
Sbjct: 2799 ASTAADRQAFAVMSI 2813


>AC006605-6|AAK85446.2|  495|Caenorhabditis elegans Clk-2 upstream,
           human gene xe7related protein 7 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 402
           L E+   R + R + +EEK+++E SK+ +L   P+
Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 271 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 387
           K E  K+ +  +EE  +  E  K +EEK EEE  K D++
Sbjct: 323 KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV 361


>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
            protein Y39B6A.18 protein.
          Length = 1352

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
 Frame = +1

Query: 250  RCRLKLLKLERIKDYLLMEEEFI-----RNQERLKPQEEKIEEERSKV 378
            R + +  K+++ ++ L  EEE +     RN+E++K +EE+++ E  KV
Sbjct: 890  RVKAEREKVKKEEERLKAEEEKVKVEKERNKEKVKAEEERLKAEEEKV 937


>AF040655-9|AAB95038.1|  288|Caenorhabditis elegans Hypothetical
           protein T24E12.3 protein.
          Length = 288

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 307 EEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435
           ++F+ NQE+L   +EKI+ ++ + D +     S G+ E  + D
Sbjct: 236 QKFLNNQEKLNEDQEKIKNDKER-DSISQVENSDGSSESGLAD 277


>AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.3 protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +1

Query: 187 KKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLL-MEEEFIRNQERL-KPQEEKIE 360
           K R A G D A K P+ +      +K + L+R    LL ME+  ++N+E+  KPQ E  E
Sbjct: 241 KNRNAGGVDPA-KRPRESAKWLKHVKEVTLKRGGVELLPMEDVIVKNKEKFKKPQNELRE 299

Query: 361 EE 366
            E
Sbjct: 300 NE 301


>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
            anchorage protein1 protein.
          Length = 8545

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/96 (19%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
 Frame = +1

Query: 274  LERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI-V 450
            L+ ++  +  E+   R Q  +  +  K+E+E +KVD+ +    ++  ++++  + + +  
Sbjct: 7823 LQALEKAIPQEDAIRREQAEINDRLNKLEKELTKVDEFKPED-ALPIVDQLAANTNTLKT 7881

Query: 451  STSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAV 558
            +T   +E  V+  S +  D L  G    +    HA+
Sbjct: 7882 ATDSNNEKAVAPSSLISHDDLVVGLPEKVFQLQHAI 7917


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,862,046
Number of Sequences: 27780
Number of extensions: 211434
Number of successful extensions: 933
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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