BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12c10 (618 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 278 3e-75 U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 87 1e-17 U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 81 8e-16 AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 36 0.018 D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.50 D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.50 D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.50 D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.50 AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 31 0.50 AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.50 AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 31 0.50 AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.50 U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 31 0.87 Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 29 2.7 AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 29 2.7 AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 29 2.7 Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 3.5 Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 3.5 Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 3.5 AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 29 3.5 AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical ... 29 3.5 AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 3.5 AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 29 3.5 Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 4.6 AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 6.1 AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical ... 28 6.1 AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical ... 28 6.1 AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 8.1 >AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 2 protein. Length = 443 Score = 278 bits (681), Expect = 3e-75 Identities = 129/155 (83%), Positives = 145/155 (93%) Frame = +1 Query: 154 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 333 YE PIP+R+GKKK+ +KGPDAA KLP VTPH RCRLKLLK ERIKDYLLME+EFI+NQER Sbjct: 28 YEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQER 87 Query: 334 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 513 LKPQEE+ EEER+KVD+LRGTPM+VG+LEEIIDD HAIVST+VGSEHYV+I+SFVDK+QL Sbjct: 88 LKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQL 147 Query: 514 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKA 618 EPGCSVLLNHK HAV+GVL DDTDPMVSVMKLEKA Sbjct: 148 EPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182 >U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical protein C10G11.8 protein. Length = 438 Score = 86.6 bits (205), Expect = 1e-17 Identities = 64/163 (39%), Positives = 84/163 (51%), Gaps = 14/163 (8%) Frame = +1 Query: 169 PTRVGKK---KRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQ--ER 333 PT K K +G + A KLP V P +C ++LLK+ RI DYL +E+EFI Q Sbjct: 15 PTHAAMKIAMKSGRRGIENANKLPTVAPKRQCLVRLLKMNRIHDYLQLEKEFITRQTSRH 74 Query: 334 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD-NHAIVSTSVGS--EHYVSILSFVDK 504 +P + E+ V LRGTP ++ + E+ DD HA+V GS E YV ILS VDK Sbjct: 75 GRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVE-GSRREWYVPILSIVDK 133 Query: 505 DQLEPGCSVLLN----HKV--HAVVGVLGDDTDPMVSVMKLEK 615 D L V++ K A+VGVL D D K+EK Sbjct: 134 DLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEK 176 >U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 3 protein. Length = 414 Score = 80.6 bits (190), Expect = 8e-16 Identities = 39/116 (33%), Positives = 72/116 (62%) Frame = +1 Query: 259 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN 438 +KL LER +L + E++I+ + R E+++ + +V ++ P+ +G E +D N Sbjct: 38 IKLTTLERQLAHLQVMEDYIKLETR--NLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQN 95 Query: 439 HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 606 HAIV ++ GS +YV +LS +D++ L+PGCSV L+ +A+V VL + D + +++ Sbjct: 96 HAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLR 151 >AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 5 protein. Length = 430 Score = 36.3 bits (80), Expect = 0.018 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 18/124 (14%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--DNH---------- 441 +M E R +E+I+E ++ + P V N+ E++D DN Sbjct: 47 IMRSEVQRINHSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLD 106 Query: 442 ------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVM 603 A++ TS + +++ ++ VD D+L+PG V +N + ++ L + D V M Sbjct: 107 AQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAM 166 Query: 604 KLEK 615 ++++ Sbjct: 167 EVDE 170 >D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. Length = 284 Score = 31.5 bits (68), Expect = 0.50 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384 L+EEE R +ERLK EK+EE VD+ Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122 >D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. Length = 284 Score = 31.5 bits (68), Expect = 0.50 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384 L+EEE R +ERLK EK+EE VD+ Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122 >D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. Length = 284 Score = 31.5 bits (68), Expect = 0.50 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384 L+EEE R +ERLK EK+EE VD+ Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122 >D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. Length = 284 Score = 31.5 bits (68), Expect = 0.50 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384 L+EEE R +ERLK EK+EE VD+ Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122 >AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical protein Y39B6A.30 protein. Length = 1408 Score = 31.5 bits (68), Expect = 0.50 Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Frame = +1 Query: 184 KKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE-RLKPQEEKIE 360 +++ K K +A + ++ P R R++ +K E ++ + E E ++ +E RLK +EEK++ Sbjct: 882 RREEKCKEKEAEEENEKLIPE-RKRMEAIKEE--EERVKAEREKVKKEEERLKAEEEKVK 938 Query: 361 EERSKV 378 E+ KV Sbjct: 939 VEKEKV 944 Score = 29.1 bits (62), Expect = 2.7 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +1 Query: 175 RVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIR-NQERLKPQEE 351 RV ++ K K + LK + + E++K +E ++ +ERLK +EE Sbjct: 915 RVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERLKAEEE 974 Query: 352 KIEEERSKV 378 K++ E+ KV Sbjct: 975 KVKIEKEKV 983 >AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical protein Y105E8B.1d protein. Length = 284 Score = 31.5 bits (68), Expect = 0.50 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384 L+EEE R +ERLK EK+EE VD+ Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122 >AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical protein Y105E8B.1b protein. Length = 193 Score = 31.5 bits (68), Expect = 0.50 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384 L+EEE R +ERLK EK+EE VD+ Sbjct: 3 LLEEELERAEERLKIATEKLEEATHNVDE 31 >AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical protein Y105E8B.1a protein. Length = 284 Score = 31.5 bits (68), Expect = 0.50 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDD 384 L+EEE R +ERLK EK+EE VD+ Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122 >U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (werner's syndrome) relatedprotein 1 protein. Length = 1056 Score = 30.7 bits (66), Expect = 0.87 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Frame = +1 Query: 181 GKKKRKAKGPDAALKLPQVTPH-TRCRLKLLKLERIKDYL-LMEEEFIRN--QERLKPQE 348 GKK++ A Q T T K+L +I++Y E E + N ++ + Sbjct: 747 GKKEKAAPSTVPGASRSQSTKSSTEIPTKILGANKIREYEPANENEQLMNLKKQEVTGLP 806 Query: 349 EKIEEERSKVDDLRGTPMSVGNLEEI 426 EKI++ RS++DD+R + + N+ E+ Sbjct: 807 EKIDQLRSRLDDIR---VGIANMHEV 829 >Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical protein W02A2.6 protein. Length = 781 Score = 29.1 bits (62), Expect = 2.7 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = +1 Query: 262 KLLKLERIKDY-LLMEEEFIRNQERLKPQEEKIEEERSK 375 KL +L + K + LLM E F RNQE L+ +E+K RSK Sbjct: 89 KLKELMKKKSFILLMAERFDRNQE-LQRKEDKFARLRSK 126 >AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical protein Y105E8B.1c protein. Length = 256 Score = 29.1 bits (62), Expect = 2.7 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = +1 Query: 295 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435 +L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111 >AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin isoform IV protein. Length = 256 Score = 29.1 bits (62), Expect = 2.7 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = +1 Query: 295 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435 +L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111 >Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein T28C6.9 protein. Length = 1861 Score = 28.7 bits (61), Expect = 3.5 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +1 Query: 223 KLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQ-EEKIEEERSKVDDLR 390 KL Q+ R++ L+ ++ + M E+ + E +K Q E+K+ E R ++DDL+ Sbjct: 1447 KLTQLRNELTARIEQLESQKSNEQAQMSEK-LSQVESMKVQIEQKLYETREELDDLK 1502 >Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical protein C28A5.6 protein. Length = 1061 Score = 28.7 bits (61), Expect = 3.5 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 271 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435 KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+ Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261 >Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein C28A5.6 protein. Length = 1061 Score = 28.7 bits (61), Expect = 3.5 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 271 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435 KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+ Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261 >AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. Length = 481 Score = 28.7 bits (61), Expect = 3.5 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 402 L E+ R + R + +EEK+++E SK+ +L P+ Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398 >AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical protein C17E7.5 protein. Length = 366 Score = 28.7 bits (61), Expect = 3.5 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 208 PDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEF 315 PDA L+L Q++P R++ L + ++ + + +EEF Sbjct: 240 PDAILRLKQISPQFLQRIRSLLVMKLIELKITDEEF 275 >AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical protein Y32H12A.8 protein. Length = 3901 Score = 28.7 bits (61), Expect = 3.5 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +1 Query: 346 EEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ-LEPG 522 EE +E E +DD+ + GNLE D + S+ +E ++ +V++ + L G Sbjct: 2739 EETVETEEMIMDDMMDLYYTPGNLEIARDTFDKLEIASIMNEILYTVDQYVEETEILFRG 2798 Query: 523 CSVLLNHKVHAVVGV 567 S + + AV+ + Sbjct: 2799 ASTAADRQAFAVMSI 2813 >AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream, human gene xe7related protein 7 protein. Length = 495 Score = 28.7 bits (61), Expect = 3.5 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +1 Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 402 L E+ R + R + +EEK+++E SK+ +L P+ Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398 >Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein E02A10.2 protein. Length = 385 Score = 28.3 bits (60), Expect = 4.6 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 271 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 387 K E K+ + +EE + E K +EEK EEE K D++ Sbjct: 323 KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV 361 >AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical protein Y39B6A.18 protein. Length = 1352 Score = 27.9 bits (59), Expect = 6.1 Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 5/48 (10%) Frame = +1 Query: 250 RCRLKLLKLERIKDYLLMEEEFI-----RNQERLKPQEEKIEEERSKV 378 R + + K+++ ++ L EEE + RN+E++K +EE+++ E KV Sbjct: 890 RVKAEREKVKKEEERLKAEEEKVKVEKERNKEKVKAEEERLKAEEEKV 937 >AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical protein T24E12.3 protein. Length = 288 Score = 27.9 bits (59), Expect = 6.1 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +1 Query: 307 EEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 435 ++F+ NQE+L +EKI+ ++ + D + S G+ E + D Sbjct: 236 QKFLNNQEKLNEDQEKIKNDKER-DSISQVENSDGSSESGLAD 277 >AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical protein Y54F10BM.3 protein. Length = 745 Score = 27.9 bits (59), Expect = 6.1 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = +1 Query: 187 KKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLL-MEEEFIRNQERL-KPQEEKIE 360 K R A G D A K P+ + +K + L+R LL ME+ ++N+E+ KPQ E E Sbjct: 241 KNRNAGGVDPA-KRPRESAKWLKHVKEVTLKRGGVELLPMEDVIVKNKEKFKKPQNELRE 299 Query: 361 EE 366 E Sbjct: 300 NE 301 >AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear anchorage protein1 protein. Length = 8545 Score = 27.5 bits (58), Expect = 8.1 Identities = 19/96 (19%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Frame = +1 Query: 274 LERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI-V 450 L+ ++ + E+ R Q + + K+E+E +KVD+ + ++ ++++ + + + Sbjct: 7823 LQALEKAIPQEDAIRREQAEINDRLNKLEKELTKVDEFKPED-ALPIVDQLAANTNTLKT 7881 Query: 451 STSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAV 558 +T +E V+ S + D L G + HA+ Sbjct: 7882 ATDSNNEKAVAPSSLISHDDLVVGLPEKVFQLQHAI 7917 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,862,046 Number of Sequences: 27780 Number of extensions: 211434 Number of successful extensions: 933 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 826 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 921 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1342816466 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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