Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12c10
(618 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 254 3e-68
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 254 3e-68
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 73 2e-13
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 42 4e-04
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 41 6e-04
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 37 0.009
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 36 0.028
At4g35730.1 68417.m05071 expressed protein contains Pfam profil... 32 0.35
At5g59000.1 68418.m07391 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At5g19260.1 68418.m02293 expressed protein various predicted pro... 29 2.5
At4g01880.1 68417.m00246 expressed protein contains Pfam PF05206... 29 2.5
At3g59820.1 68416.m06675 calcium-binding mitochondrial protein-r... 29 2.5
At3g14780.1 68416.m01868 expressed protein 29 2.5
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 29 2.5
At5g13350.1 68418.m01538 auxin-responsive GH3 family protein sim... 28 4.3
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 28 4.3
At1g60160.1 68414.m06777 potassium transporter family protein si... 28 4.3
At5g14990.1 68418.m01758 hypothetical protein 28 5.7
At2g01910.1 68415.m00125 microtubule associated protein (MAP65/A... 28 5.7
At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal hydrolase-r... 28 5.7
At5g63320.1 68418.m07946 expressed protein 27 7.5
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 27 7.5
At1g26850.3 68414.m03275 dehydration-responsive family protein s... 27 7.5
At1g26850.2 68414.m03274 dehydration-responsive family protein s... 27 7.5
At1g26850.1 68414.m03273 dehydration-responsive family protein s... 27 7.5
At1g18710.1 68414.m02334 myb family transcription factor (MYB47)... 27 7.5
At5g24350.1 68418.m02870 expressed protein weak similarity to ne... 27 10.0
At4g15130.1 68417.m02324 cholinephosphate cytidylyltransferase, ... 27 10.0
At4g08990.1 68417.m01485 DNA (cytosine-5-)-methyltransferase, pu... 27 10.0
At3g30440.1 68416.m03851 Ulp1 protease family protein contains P... 27 10.0
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containi... 27 10.0
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 254 bits (623), Expect = 3e-68
Identities = 119/156 (76%), Positives = 141/156 (90%), Gaps = 1/156 (0%)
Frame = +1
Query: 154 YEPPIP-TRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE 330
+EP P RVG+K+RK KGP+AA +LP VTP T+C+L+LLKLERIKDYLLMEEEF+ NQE
Sbjct: 27 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQE 86
Query: 331 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ 510
RLKPQEEK EE+RSKVDDLRGTPMSVGNLEE+ID+NHAIVS+SVG E+YV ILSFVDKDQ
Sbjct: 87 RLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQ 146
Query: 511 LEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKA 618
LEPGCS+L+++KV +VVG+L D+ DPMVSVMK+EKA
Sbjct: 147 LEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKA 182
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 254 bits (623), Expect = 3e-68
Identities = 119/156 (76%), Positives = 141/156 (90%), Gaps = 1/156 (0%)
Frame = +1
Query: 154 YEPPIP-TRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE 330
+EP P RVG+K+RK KGP+AA +LP VTP T+C+L+LLKLERIKDYLLMEEEF+ NQE
Sbjct: 27 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQE 86
Query: 331 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ 510
RLKPQEEK EE+RSKVDDLRGTPMSVGNLEE+ID+NHAIVS+SVG E+YV ILSFVDKDQ
Sbjct: 87 RLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQ 146
Query: 511 LEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKA 618
LEPGCS+L+++KV +VVG+L D+ DPMVSVMK+EKA
Sbjct: 147 LEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKA 182
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/115 (31%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Frame = +1
Query: 262 KLLKLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN 438
+L LER ++ ++EE+++++++ LK + + +EE V ++ P+ +G E++D N
Sbjct: 33 RLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQN 89
Query: 439 HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVM 603
+ IV ++ GS +YV ILS ++++ L+P SV L+ +A+V VL + D +S++
Sbjct: 90 NGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLL 144
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +1
Query: 325 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 504
+E L+ +++ + + L+ +G + +D+ IV S G + V S VDK
Sbjct: 36 RENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 95
Query: 505 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 594
++L G V+L+ ++ L + DP+V
Sbjct: 96 EKLTSGTRVVLDMTTLTIMRALPREVDPVV 125
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +1
Query: 325 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 504
+E L+ +++ + + L+ +G + +D+ IV S G + V S VDK
Sbjct: 36 RENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDK 95
Query: 505 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 594
++L G V+L+ ++ L + DP+V
Sbjct: 96 EKLTSGTRVVLDMTTLTIMRALPREVDPVV 125
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 37.1 bits (82), Expect = 0.009
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Frame = +1
Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEII-----DDNH------- 441
+++EE R L+ +EKI+E + K+ + P VGN+ EI+ DD
Sbjct: 37 ILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANID 96
Query: 442 ---------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 594
++ TS ++ ++ VD D L+PG V +N + ++ L + D V
Sbjct: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
Query: 595 SVMKLEK 615
M++++
Sbjct: 157 KAMEVDE 163
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 35.5 bits (78), Expect = 0.028
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 21/127 (16%)
Frame = +1
Query: 298 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNH------------ 441
+++E+ R +EKI+E + K+ + P VGN+ EI++ N
Sbjct: 38 ILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANID 97
Query: 442 ---------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 594
++ TS ++ ++ VD D L+PG V +N + ++ L + D V
Sbjct: 98 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRV 157
Query: 595 SVMKLEK 615
M++++
Sbjct: 158 KAMEVDE 164
>At4g35730.1 68417.m05071 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 430
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +1
Query: 223 KLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 402
KL P +LK++K E K++ + + QE LKPQEE I+ R K P+
Sbjct: 135 KLSVRNPGGEYKLKIMK-EIAKEFQVDWDTTETEQELLKPQEESIDGPR-KFVSASSLPV 192
Query: 403 SVGNLEEIIDDNHAI 447
+ + E ID A+
Sbjct: 193 NRAAINEPIDPTKAV 207
>At5g59000.1 68418.m07391 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger) ;contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 231
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +1
Query: 181 GKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIE 360
G KKR+ + K + CR+ L LE K+ +EE + + + +E++ E
Sbjct: 57 GGKKRRTRRRKRRKKKKKKKGGRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEE 116
Query: 361 EERSKVDDLRGTPMSVG 411
EE + ++ G P+ +G
Sbjct: 117 EEEEEEEEYYGLPLQLG 133
>At5g19260.1 68418.m02293 expressed protein various predicted
proteins
Length = 288
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 256 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRG 393
RL+L L+ +++ EEE I +E + +EE+ EEE D++ G
Sbjct: 212 RLRLSILKDSNEFVENEEETIEPEETEEYEEEEEEEEDEDEDEVMG 257
>At4g01880.1 68417.m00246 expressed protein contains Pfam PF05206:
Protein of unknown function (DUF715)
Length = 453
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 77 GIDSEWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKR 190
G D E K+ +VT +M + SMS+ H+L+K+
Sbjct: 87 GNDEEEEKMGSCSLVTSEMKRNLLYSMSVSKFHQLIKK 124
>At3g59820.1 68416.m06675 calcium-binding mitochondrial
protein-related contains weak similarity to
Calcium-binding mitochondrial protein Anon-60Da
(Swiss-Prot:P91927) [Drosophila melanogaster]
Length = 755
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 310 EFIRNQERL-KPQEEKIEEERSKVDDLRG 393
E++ QE L K +EEK EEE +++ D++G
Sbjct: 520 EYLEMQEELIKEEEEKEEEELTRIKDVKG 548
>At3g14780.1 68416.m01868 expressed protein
Length = 275
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 295 LLMEEEFIRNQERLKPQEEKIEEERSKVDDL 387
L E++++ QE+L E+KIEE K+ D+
Sbjct: 211 LFYEDKYLETQEKLNKLEKKIEEMELKLKDV 241
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 259 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDD 384
L+ L+++R K+ M +E RN+ + +EE++ ER K ++
Sbjct: 383 LEKLEIQRKKNEERMRKEMERNERERRKEEERLMRERIKEEE 424
>At5g13350.1 68418.m01538 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 587
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 454 TSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGV-LGDDTDPMVS 597
T + S Y L V KDQ E G + NH V +V V +G D +P+V+
Sbjct: 349 TIIPSMAYFEFLE-VKKDQQEAGLDPIENHVVVDLVDVKIGHDYEPVVT 396
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 protein,
Xenopus laevis, PIR:T30335
Length = 1229
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 265 LLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 387
+L+ + D L +EE + Q +K EK+ R +VDD+
Sbjct: 1050 ILRTGKATDLLKSQEEKTKLQSEMKLSREKLASVRKEVDDM 1090
>At1g60160.1 68414.m06777 potassium transporter family protein
similar to potassium transporter HAK2p [Mesembryanthemum
crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
Transporter family member, PMID:11500563; contains Pfam
profile PF02705: K+ potassium transporter
Length = 827
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 53 NSIN-LGTCGIDSEWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGKLRDQM 214
NSI +GT D WV ++V+ T ++ R R S +L + +K K D +
Sbjct: 11 NSIRRVGTGSSDRRWVDGSEVDSETPLFSEIRDRDYSFGNLRRRLMKKPKRADSL 65
>At5g14990.1 68418.m01758 hypothetical protein
Length = 666
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 193 RKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDY-LLMEEEFIRNQ 327
RKA+ + +K ++ +C L L R KDY +L+E+E R +
Sbjct: 465 RKAEEEEEEIKSEKIESEVKCMDCLENLNREKDYEILLEDEEFRQE 510
>At2g01910.1 68415.m00125 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 567
Score = 27.9 bits (59), Expect = 5.7
Identities = 25/107 (23%), Positives = 47/107 (43%)
Frame = +1
Query: 283 IKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSV 462
+++ + +EE ++ +K Q EKI E S D M N+ +++ +
Sbjct: 74 VEELRIQKEERMKQFSDIKAQIEKISGEISGYSDHLNKAM---NISLTLEEQDLTLRNLN 130
Query: 463 GSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVM 603
+ ++ L D+L + ++VHA+ GVLG D VS +
Sbjct: 131 EYQTHLRTLQKEKSDRLNKVLGYV--NEVHALCGVLGVDFSQTVSAV 175
>At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 325 QERLKPQEEKIEEERS--KVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFV 498
+E L +E+K +E++S K R + + +D + S S+ E VS+L V
Sbjct: 674 EEELLTEEKKRKEKKSGPKKKKHRSNKRTSASKSSHLDQDDPQES-SINLEPGVSLLKMV 732
Query: 499 DKDQLEP 519
D+D +EP
Sbjct: 733 DEDSIEP 739
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 277 ERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDD 384
E+ +DY +E I ER + E +E+E S+ DD
Sbjct: 370 EKAQDYENQRDEKINQSEREEQLENVLEQESSRDDD 405
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 253 CRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID 432
C+ K + ER +D + E+ ++++K E+K+E++ SK+ D+ NL +
Sbjct: 328 CKEKFKEFER-QD-VKHREDLKHVKQKIKKLEDKLEKDSSKIGDMTKESEDSSNLIPKLQ 385
Query: 433 DN 438
+N
Sbjct: 386 EN 387
>At1g26850.3 68414.m03275 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 506
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 376 VDDLRGT-PMSVGNLEEIIDDNHAIVSTSVGS-EHYVSILSFVDKDQLEPGCSVLLNHKV 549
+D L PM G + +D + S V +SF +D E L V
Sbjct: 194 IDQLASVIPMENGTVRTALDTGCGVASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGV 253
Query: 550 HAVVGVLG 573
AV+GVLG
Sbjct: 254 PAVIGVLG 261
>At1g26850.2 68414.m03274 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 616
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 376 VDDLRGT-PMSVGNLEEIIDDNHAIVSTSVGS-EHYVSILSFVDKDQLEPGCSVLLNHKV 549
+D L PM G + +D + S V +SF +D E L V
Sbjct: 194 IDQLASVIPMENGTVRTALDTGCGVASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGV 253
Query: 550 HAVVGVLG 573
AV+GVLG
Sbjct: 254 PAVIGVLG 261
>At1g26850.1 68414.m03273 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 616
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 376 VDDLRGT-PMSVGNLEEIIDDNHAIVSTSVGS-EHYVSILSFVDKDQLEPGCSVLLNHKV 549
+D L PM G + +D + S V +SF +D E L V
Sbjct: 194 IDQLASVIPMENGTVRTALDTGCGVASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGV 253
Query: 550 HAVVGVLG 573
AV+GVLG
Sbjct: 254 PAVIGVLG 261
>At1g18710.1 68414.m02334 myb family transcription factor (MYB47)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 267
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 274 LERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEI 426
L+RIK Y+L I + ++ K +EEK EEE + D + G + E+I
Sbjct: 180 LDRIK-YIL-SNSIIESSDQAKEEEEKEEEEEER-DSMMGQKIDGSEGEDI 227
>At5g24350.1 68418.m02870 expressed protein weak similarity to
neuroblastoma-amplified protein [Homo sapiens] GI:4337460
Length = 2376
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 252 SCMRRDLRKL-ESRIWSLSFPFLFTNSCR 169
+CM RDLR+L E + L F+ T CR
Sbjct: 944 ACMWRDLRQLQEKAFYFLDLEFVLTEFCR 972
>At4g15130.1 68417.m02324 cholinephosphate cytidylyltransferase,
putative / phosphorylcholine transferase, putative /
CTP:phosphocholine cytidylyltransferase, putative strong
similarity to CTP:phosphorylcholine cytidylyltransferase
[Arabidopsis thaliana] GI:21668498; contains Pfam
profile PF01467: Cytidylyltransferase; identical to cDNA
AtCCT2 for CTP:phosphorylcholine cytidylyltransferase
GI:21668499
Length = 299
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 301 MEEEFIRNQERLKPQEEKIEEERSKVDDLRGT 396
+EE+ +R RLK +EK++E++ K+ + T
Sbjct: 180 LEEKRLRVNMRLKKLQEKVKEQQEKIQTVAKT 211
>At4g08990.1 68417.m01485 DNA (cytosine-5-)-methyltransferase,
putative strong similarity to cytosine-5
methyltransferase (METII) [Arabidopsis thaliana]
GI:6523846; contains Pfam profiles PF01426: BAH domain,
PF00145: C-5 cytosine-specific DNA methylase
Length = 1512
Score = 27.1 bits (57), Expect = 10.0
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 304 EEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLE--EIIDDNHAIVSTSVGSEHY 477
EEE ++E + +E+ IEEE +V S GN E EI + + TS G Y
Sbjct: 640 EEEIEEDEEEDENEEDDIEEEAVEVQKSHTPKKSRGNSEDMEIKWNGEILGETSDGEPLY 699
Query: 478 VSILSFVDKDQLEPGCSVLL 537
L V + + G +V+L
Sbjct: 700 GRAL--VGGETVAVGSAVIL 717
>At3g30440.1 68416.m03851 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 601
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 56 SINLGTCGIDSEWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGK 199
SI LGT S+W +++VE + + R + +H ++RKGK
Sbjct: 21 SIALGTVQQYSDWNLVSKVEEDLGECLFQKIRRIQCEPVHRELRRKGK 68
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P46825 Kinesin light chain
(KLC) {Loligo pealeii}; contains Pfam profile PF00515:
TPR Domain
Length = 1797
Score = 27.1 bits (57), Expect = 10.0
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 154 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIR-NQE 330
Y P GK+ AK + LKL + + + L+++ R K + EE+ E
Sbjct: 1135 YINPSHNAKGKESVAAKRKNYILKLKEKSKQSNVSEHLVEIPREKQKEMSEEDTEETGSE 1194
Query: 331 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSE 471
K EE E + V++ P+ + +D+++ I S+ V +E
Sbjct: 1195 EGKSSEENHETILAPVEEPPSPPVIE---DATMDNSNPITSSDVSTE 1238
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,151,350
Number of Sequences: 28952
Number of extensions: 197873
Number of successful extensions: 944
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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