Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12c09
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075174-1|AAL68044.1|  381|Drosophila melanogaster AT07283p pro...    42   6e-04
AE014297-1079|AAF54486.2|  381|Drosophila melanogaster CG12812-P...    42   6e-04

>AY075174-1|AAL68044.1|  381|Drosophila melanogaster AT07283p
           protein.
          Length = 381

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
 Frame = +2

Query: 380 NFRQHVICVEYKSYQKLLVKSTQLPHAGSL----EREYNNLDEIVTTFREFILDLTPYFH 547
           +F QH + ++  S   LL+    LP   SL     +   NL+E +  FR+ + DL P++ 
Sbjct: 142 DFEQHYLELKIPS---LLLLDHSLPDCVSLGEMLTKSAGNLEEALNLFRKLLEDLRPFYD 198

Query: 548 QLELIDRNCTVKEPRNPSFKDDYRKILIDDRIWLHVEV 661
               ID  C V +P   S K   R   + DR++L + +
Sbjct: 199 NFMDIDELCHVLQPSPISSKHKTRLFPLKDRVYLKLTI 236


>AE014297-1079|AAF54486.2|  381|Drosophila melanogaster CG12812-PA
           protein.
          Length = 381

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
 Frame = +2

Query: 380 NFRQHVICVEYKSYQKLLVKSTQLPHAGSL----EREYNNLDEIVTTFREFILDLTPYFH 547
           +F QH + ++  S   LL+    LP   SL     +   NL+E +  FR+ + DL P++ 
Sbjct: 142 DFEQHYLELKIPS---LLLLDHSLPDCVSLGEMLTKSAGNLEEALNLFRKLLEDLRPFYD 198

Query: 548 QLELIDRNCTVKEPRNPSFKDDYRKILIDDRIWLHVEV 661
               ID  C V +P   S K   R   + DR++L + +
Sbjct: 199 NFMDIDELCHVLQPSPISSKHKTRLFPLKDRVYLKLTI 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,229,232
Number of Sequences: 53049
Number of extensions: 510254
Number of successful extensions: 1108
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)