Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12c06
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 34 0.096
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 31 0.51
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 31 0.90
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_34783| Best HMM Match : Gam (HMM E-Value=0.24) 29 2.7
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 3.6
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17720| Best HMM Match : Atracotoxin (HMM E-Value=3.2) 29 3.6
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 29 3.6
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 28 4.8
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07) 28 6.3
SB_20297| Best HMM Match : LCCL (HMM E-Value=9.7) 28 6.3
SB_17067| Best HMM Match : TP2 (HMM E-Value=4.1) 28 6.3
SB_53694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 27 8.4
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 35.5 bits (78), Expect = 0.032
Identities = 29/113 (25%), Positives = 50/113 (44%)
Frame = +1
Query: 217 SNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMG 396
S G KKP + KKK G Y D E S E E+V K+ ++ S G G
Sbjct: 428 SKGAKKGTKKPRVPKKKEGEEGYDPYDFE-----SDEEETEEVVDKIKKRRSSRASAGDG 482
Query: 397 RSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEI 555
TE +D S+ + +++E + + LQ++ TK+ ++ + ++
Sbjct: 483 TDDATESMD---TSDATQDTTATISEERLNKFKSSLQQVFTKAHTQTLPLSDV 532
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 33.9 bits (74), Expect = 0.096
Identities = 35/151 (23%), Positives = 65/151 (43%)
Frame = +1
Query: 100 LDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYH 279
L T +T +S+ T R+ E L +++ R + I +KK+
Sbjct: 727 LKTGRTNKAQYSEATNIYREPYLIQEKTQRLKYAIEEKAKKERERMEQLEIQRQKKVEEQ 786
Query: 280 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS 459
+ ++EKR+ R E+ + +L +++ L ST TE EED K+
Sbjct: 787 KKKREEKEKRVAELRA---ERQR-ELMEKKKQLLEKDKLISTLTEKAKKKKEREEDAKRR 842
Query: 460 LKMAKEAIANLERDLQKMDTKSSPKSAQMDE 552
L++ K+A + R Q+ +T+ + Q +E
Sbjct: 843 LRLQKKADLDARRK-QEEETRKQRQLEQEEE 872
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 33.9 bits (74), Expect = 0.096
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 325 ENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE-EDMKQSLKMAKEAIANLERD 501
E+ K+ KL + E AL +T ++ + E L SE ED L+ A+ ANLE+
Sbjct: 1423 EDAKRKLAAKLQEMEEAL-NTAQTKAASAEKTRSRLNSELEDALIDLEKAQTNNANLEKK 1481
Query: 502 LQKMDTKSSPKSAQMDEINLE 564
+K+D + + +++E+ +
Sbjct: 1482 QKKIDIQINEWRVKLEEVQAD 1502
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 33.1 bits (72), Expect = 0.17
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 7/159 (4%)
Frame = +1
Query: 112 KTLNGDFSDTTVR--ERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVK-----KKI 270
KTL D DT+ R E K ELD LN++VD+ +SL K + + K+
Sbjct: 948 KTLE-DLLDTSKRVVEEKEQKVTELDKLLNESVDELQQKDKSLKEKDGKLAELDQALKES 1006
Query: 271 GYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDM 450
+ + ++ SS ++ K E L + S +I + +
Sbjct: 1007 RKEIKNREAQVSQMDSSMREQKTEIYQKTMALEQNLNQSRHELSERAVEIAELKAKYDQS 1066
Query: 451 KQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 567
+ L+ K +A+ E+ ++ + AQ+ ++ +EA
Sbjct: 1067 QDQLRQTKNRLAHYEKVARQQQEDLKKRIAQLTDLEVEA 1105
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +1
Query: 268 IGYHLYRDSDEEKRLTSSRENCNEKVKVKLC--DEEAALTSTGMGRSTTTEDIDDHLMSE 441
+G + +DSDEEKR + EN V+ K D+E A + D + +
Sbjct: 151 MGSSVAKDSDEEKRKSDDDENKEGGVRSKRVDQDQEKAKEEGKAEKEAERNDSSEDENKD 210
Query: 442 EDMK--QSLKMAKEAIANLERDLQKMDTKSSPKSAQMDE 552
D K Q+ ++ +E + + +L + T+++ ++ +++E
Sbjct: 211 SDAKAAQTKEVEEEEVRSNRGNLDEQSTEANAQTKEVEE 249
>SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +1
Query: 337 EKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS-----LKMAKEAIANLERD 501
EK K K ++AA+ ++G GR+++ + D+H++ + + + + + E I+ + +
Sbjct: 232 EKEKEKAEKKKAAVAASGRGRASSAGEEDEHIIEQGALSPNAVGSIVGLQSEEISQMASE 291
Query: 502 LQKMDTKSSPKSAQMDE 552
+ D KSS S+ +E
Sbjct: 292 YAERDFKSSALSSGNNE 308
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +1
Query: 346 KVKLCDEEAALTSTGMGRSTTTEDIDDHL------MSEEDMKQSLKMAKEAIANLERDLQ 507
KV+L E AL T E ++ L M++E+ + LKMA+E I NL+++L
Sbjct: 27 KVELLASEKALKEEIDSIKTRVEGLEQELEKHKGAMADEEAIRRLKMAEETIENLQKNLA 86
Query: 508 KMDTKSSPKSAQMD 549
+ + A+M+
Sbjct: 87 ATKQEEAALLAEME 100
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.7 bits (66), Expect = 0.90
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 298 EEKRLTSSRENCNEKVKVK---LCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 468
E K L + R N ++ K L E L + R +ID+ ++ MK+ L
Sbjct: 1038 EIKELKAQRNNLETELSNKSHKLAITEGQLANARKDRDNLKAEIDNLNITIRKMKEDLLA 1097
Query: 469 AKEAIANLERDLQKMDTKSSPKSAQMDEI 555
A+ ++ ER+++ D + K A ++ +
Sbjct: 1098 AQSSLKQKEREVETKDKELKDKDAIIERL 1126
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/90 (22%), Positives = 42/90 (46%)
Frame = +1
Query: 295 DEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAK 474
D+E + + + +K ++ D+E M + E++D M +ED ++ K K
Sbjct: 19 DKENKEDKEKMDKEDKEEMDKQDKENKEDKEEMDKEDK-EEMDQEEMDKEDKEEMDKEDK 77
Query: 475 EAIANLERDLQKMDTKSSPKSAQMDEINLE 564
E + E D ++MD + K + D+ ++
Sbjct: 78 EEMDQEEMDKEEMDQEEMDKEDKEDKEEMD 107
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +1
Query: 316 SSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLE 495
+S+E E V + + A GMGR +++DD L + +K +L + E +L
Sbjct: 1547 ASKEEVPEAVAAESLETLEAAPGDGMGRLDIEDELDDALNVYQQLKTALDASNEDNVSLR 1606
Query: 496 RDLQKMDTKSSPKSAQMDEINLE 564
K + ++DE+ ++
Sbjct: 1607 ERENKHLALLAESEKKIDELMVQ 1629
>SB_34783| Best HMM Match : Gam (HMM E-Value=0.24)
Length = 347
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/66 (21%), Positives = 30/66 (45%)
Frame = +1
Query: 337 EKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMD 516
+K +L +E+ ++ ++ +DH+ ++M + LK E +A + + D
Sbjct: 15 QKANARLEEEKTSIEEHAHYLQQLLQEKEDHIAHAQEMNKILKQRVEKLAQKQNPKKNKD 74
Query: 517 TKSSPK 534
TK K
Sbjct: 75 TKELEK 80
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 262 KKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE 441
+ +G L E + L S E+ N+KV+ +CD L S E + L +
Sbjct: 716 RNLGSELKALKKENEELVSQVESLNQKVEQVVCDNSKEL-------SDLKEKFERELQEK 768
Query: 442 E-DMKQSLKMAKEAIANLERDLQKMD 516
++++ ++ E IA LER ++ +
Sbjct: 769 RTTIRETKDISNEEIATLERKFEERE 794
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 280 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRS----TTTEDIDDHLMSEED 447
L D + KR + +E+ + KLCD+ + L + R + E + +HL + E
Sbjct: 698 LLSDLESVKREKELLVSAHEEREKKLCDDISELKGELIRRDEAIRESNESLGNHLQTIES 757
Query: 448 MKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINL 561
+KQ +++ ++ + D +K + ++ Q E +L
Sbjct: 758 LKQKSELSSSSL-RFQDDERKHEIETLKTRLQKAEADL 794
>SB_17720| Best HMM Match : Atracotoxin (HMM E-Value=3.2)
Length = 389
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +1
Query: 214 ISNGRSLHAKKPIIVKKKIGYH--LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTST 387
IS+G+ L A+ + K+ H L +DS+E + NC K E+
Sbjct: 133 ISSGKVLDAEALTLNCKQCQVHGNLEKDSEEYALWRADHNNCKSNYKGSSPSMESEGMER 192
Query: 388 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLER 498
RS T+ + + +S K KE I ++E+
Sbjct: 193 MFSRSQDTQKFRYSELYGDGNSKSFKQKKECIDHVEK 229
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 374 AASSSHNLTFTFSLQFSRELVNLFSSSESRYK*YPIFFLTIIG--FLACKLLPFDMPSST 201
AA+ S ++ +L +L+N R++ +P+ I F+ C+++P D PS
Sbjct: 513 AAAKSKGVSLNDNLLIGPDLLNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLR 572
Query: 200 F 198
F
Sbjct: 573 F 573
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 91 GEHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNG 225
G+H+D TL + D T + + + ++D N+N DG+ G
Sbjct: 1074 GKHIDRIITLQNEILDATNPKLREALKKKIDKIKNENDLDGMELG 1118
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 430 LMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLE 564
LM +E +++ E ANLERDL+K+ ++ E+ L+
Sbjct: 969 LMKQEKFANTMRALHEDKANLERDLRKVTEDRLLAEDKLSELELK 1013
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 406 TTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 504
T E+++D L +ED + LK ++ + +++RDL
Sbjct: 1445 TMEELEDELQVKEDGLRQLKKYQQQLKDIQRDL 1477
>SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07)
Length = 349
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Frame = +1
Query: 250 IIVKK-KIGYHLYRDSDEEKRLTSSRENCNEKVKV------KLCDEE--------AALTS 384
+++KK K Y+ +++D++KRL ++ E++ KL +EE A L
Sbjct: 149 VLIKKFKDDYYSVKNADKKKRLEEEQKARKEEIAAQVKSEEKLAEEEEEFKYEKGAVLHF 208
Query: 385 TGMGRSTTTEDIDDHLMSEEDM 450
T +G T+ ED+ + ED+
Sbjct: 209 TDVGEQTSREDLKELFGEHEDI 230
>SB_20297| Best HMM Match : LCCL (HMM E-Value=9.7)
Length = 100
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 451 KQSLKMA-KEAIANLERDLQKMDTKSSPKSAQMDEINLE 564
KQ K+ E+ NLE LQ + K+SPKS Q+D + LE
Sbjct: 52 KQKKKVTFVESAPNLE--LQTHNAKTSPKSNQIDIVKLE 88
>SB_17067| Best HMM Match : TP2 (HMM E-Value=4.1)
Length = 330
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 451 KQSLKMA-KEAIANLERDLQKMDTKSSPKSAQMDEINLE 564
KQ K+ E+ NLE LQ + K+SPKS Q+D + LE
Sbjct: 282 KQKKKVTFVESAPNLE--LQTHNAKTSPKSNQIDIVKLE 318
>SB_53694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 900
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 256 VKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTT 408
V + I L D+D+EKRL S + +K K KL L T S T
Sbjct: 17 VNEYISDDLASDTDDEKRLYRSEKRAEKKQKDKLHQRREKLLRTRPQSSAT 67
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 301 EKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEA 480
EKR+T+ + +K + ++ + L G ++DI+ HL+ +D + + A +A
Sbjct: 1768 EKRITTLQGQAQDKDE-EIAQLKRKLNEYSDGLGQGSKDIETHLIEIKDKSEIYRKADKA 1826
Query: 481 IANLERDLQKMDT 519
A + DL+ T
Sbjct: 1827 KALVIEDLRAEKT 1839
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 27.5 bits (58), Expect = 8.4
Identities = 27/142 (19%), Positives = 56/142 (39%)
Frame = +1
Query: 109 FKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYR 288
F+ N + + + ++AELD ++ V++ + K + +++ L
Sbjct: 1951 FQLYNMRPTQSPTEGESANSEAELDFGISSLVEENAK--LKVELKDINVENEELQSQLEL 2008
Query: 289 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 468
+E R+ + E + + S G+ T ED+ EED+ L
Sbjct: 2009 TKEELTRVEALLETYRKSSSITSSTPSILQKSPGI---TVEEDMSQVKHMEEDLGNFLFY 2065
Query: 469 AKEAIANLERDLQKMDTKSSPK 534
+E +A +ER+ +D S +
Sbjct: 2066 VQEELAKIERNQTAIDENSQQR 2087
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/139 (15%), Positives = 61/139 (43%)
Frame = +1
Query: 139 TTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTS 318
+ +RE+ + + + N NV S+ + + ++++ L R ++E++ +
Sbjct: 1766 SVLREKDNEIRTLKNQISNLNVLQHSSHQADTGLESILHEREQLSEELMRANNEKEDIIR 1825
Query: 319 SRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLER 498
RE ++ ++ + S + T++I+ +E + ++ + NLE+
Sbjct: 1826 ERETTVADLEAQIIE---LTNSVSTKEKSVTQEIETIKRDKERADKEMEQLRSNKKNLEK 1882
Query: 499 DLQKMDTKSSPKSAQMDEI 555
DL ++ + S ++ D +
Sbjct: 1883 DLTQVKGELSRLGSESDRL 1901
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.5 bits (58), Expect = 8.4
Identities = 28/114 (24%), Positives = 47/114 (41%)
Frame = +1
Query: 220 NGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGR 399
NG S H + I KK ++ + +R S +N ++ K + + AL
Sbjct: 907 NGDSNHKDELIENLKKEIESQEKEIKKLRRDVLSAQNSLDQSMQKRDELDKALFVAKQQL 966
Query: 400 STTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINL 561
S I + E + +SLK E LE +L K + + +Q+DE N+
Sbjct: 967 SDDELTIGNLQQENEFLNESLKDTHERNVELEHELAKARKECASLRSQLDENNI 1020
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.129 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,082,884
Number of Sequences: 59808
Number of extensions: 259508
Number of successful extensions: 851
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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