Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12c06
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 33 0.11
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 33 0.19
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine pal... 32 0.34
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 30 1.4
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 29 1.8
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 29 1.8
U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical pr... 29 1.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 1.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 1.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 1.8
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 29 1.8
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 2.4
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 28 4.2
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 4.2
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 28 4.2
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 4.2
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 4.2
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 4.2
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 4.2
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 28 4.2
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 28 5.5
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 28 5.5
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.5
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 28 5.5
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 28 5.5
Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical pr... 27 7.3
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 7.3
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 7.3
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 27 7.3
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 7.3
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 27 7.3
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 7.3
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 27 7.3
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 27 9.6
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 33.5 bits (73), Expect = 0.11
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 2/155 (1%)
Frame = +1
Query: 91 GEHLDTFKTLNGDFSDTTVRERKSTAQAEL-DHHLNQNVDDGISNGRSLHAKKPIIVKKK 267
G +D + + D D R+R+ Q E + ++ D + +K KK+
Sbjct: 28 GLGMDQKEIVGDDKKDKEARKRERKLQDEFAELKKDEEKDKEEAEKEKNEKEKKEEEKKE 87
Query: 268 IGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID-DHLMSEE 444
G+ D E+K+ EN N++ K K D++ + T TED + + ++
Sbjct: 88 DGHEKKEDKKEDKK-----ENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKK 142
Query: 445 DMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMD 549
+ K+ K KE E D +K K+ + + D
Sbjct: 143 EKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKED 177
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 32.7 bits (71), Expect = 0.19
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Frame = +1
Query: 193 NQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEA 372
N+N ISNGR + KK +V+ + DSDEE + +++ + D E
Sbjct: 142 NENKVTLISNGREIAFKKTEVVESDDEQMIGLDSDEELEDEDETDIDEDEMMIDPKDIER 201
Query: 373 ALTSTGMGRSTTTED--IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQM 546
+ + ED I+D +E+ + + A E E D+ ++ S A
Sbjct: 202 YINFESVEDEEDMEDEEIEDEEFEDEEFEDEEEEADEQ-EEEEEDVSDEESVVSEMDADS 260
Query: 547 DEINLEAGAE 576
D+ AG +
Sbjct: 261 DDEGFIAGKD 270
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 406 TTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLE 564
TT+ + D L +++K LKM E LE++ +++K+ A M+ +N+E
Sbjct: 260 TTKKLKDDL---QNVKNELKMTNEMKKTLEQEKMSLNSKTEHLQANMESLNIE 309
>AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine
palmitoyl transferaseprotein 4 protein.
Length = 748
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 427 HLMSEEDMKQSLKMAKEAIANLERDLQK 510
HLMSEED Q L+M+++ ++N R +Q+
Sbjct: 162 HLMSEEDYDQLLEMSRKFVSNEGRSIQR 189
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 301 EKRLTSSRE--NCNEKVKV---KLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLK 465
EK++ SS N +EK +V K + A + T + +D + E+D ++ K
Sbjct: 1089 EKKMLSSEHLSNDSEKARVEIGKFLAKSAEFSPTPAVAVAILDVFEDLKLDEDDDAETRK 1148
Query: 466 -MAKEAIANLERDLQKMD 516
MAK A+A L++D K+D
Sbjct: 1149 IMAKYALAYLKKDWSKVD 1166
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = +1
Query: 394 GRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGA 573
GR+ IDD L++ +++ + + K IA LE ++ ++ ++ ++++ + +E
Sbjct: 166 GRAEDRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELDQ 225
Query: 574 E 576
E
Sbjct: 226 E 226
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 295 DEEKRL--TSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 468
DE+KRL T + C EK+K K D E LT + L E+ + L+
Sbjct: 111 DEKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLEN 170
Query: 469 AKEAIANLERDLQ 507
K LE +++
Sbjct: 171 IKSRNPELEAEIR 183
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = +1
Query: 394 GRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGA 573
GR+ IDD L++ +++ + + K IA LE ++ ++ ++ ++++ + +E
Sbjct: 166 GRAEDRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELDQ 225
Query: 574 E 576
E
Sbjct: 226 E 226
>U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical
protein C32D5.3 protein.
Length = 859
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 370 AALTSTGMGRSTTTEDIDDHLMSEEDMKQSLK 465
+AL ST G +T TE+ L + ED+ +SLK
Sbjct: 645 SALNSTSQGATTITEEDQTLLFNAEDIAESLK 676
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/112 (19%), Positives = 52/112 (46%)
Frame = +1
Query: 241 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI 420
+KP K + + D+ +E + ++E +EK K K+ ++ + + + ++ T +
Sbjct: 9281 EKPETAKLESKSKMTEDTTKE---SDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAV 9337
Query: 421 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAE 576
+ SE + + + KE + QK++ + + K + + LEA A+
Sbjct: 9338 ESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLEAEAK 9389
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +1
Query: 271 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 444
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 445 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 537
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/112 (19%), Positives = 52/112 (46%)
Frame = +1
Query: 241 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI 420
+KP K + + D+ +E + ++E +EK K K+ ++ + + + ++ T +
Sbjct: 9301 EKPETAKLESKSKMTEDTTKE---SDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAV 9357
Query: 421 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAE 576
+ SE + + + KE + QK++ + + K + + LEA A+
Sbjct: 9358 ESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLEAEAK 9409
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +1
Query: 271 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 444
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 445 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 537
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/112 (19%), Positives = 52/112 (46%)
Frame = +1
Query: 241 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI 420
+KP K + + D+ +E + ++E +EK K K+ ++ + + + ++ T +
Sbjct: 9301 EKPETAKLESKSKMTEDTTKE---SDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAV 9357
Query: 421 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAE 576
+ SE + + + KE + QK++ + + K + + LEA A+
Sbjct: 9358 ESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLEAEAK 9409
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +1
Query: 271 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 444
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 445 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 537
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 295 DEEKRL--TSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 468
DE+KRL T + C EK+K K D E LT + L E+ + L+
Sbjct: 111 DEKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLEN 170
Query: 469 AKEAIANLERDLQ 507
K LE +++
Sbjct: 171 IKSRNPELEAEIR 183
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.1 bits (62), Expect = 2.4
Identities = 30/147 (20%), Positives = 56/147 (38%)
Frame = +1
Query: 127 DFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEK 306
D + + K + +A +D ++ S RS +KK +++ DS+EE
Sbjct: 289 DEEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSKKSKKESDEEQQAS-----DSEEEV 343
Query: 307 RLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIA 486
+K K +E + S+G + +++ K+S +E +
Sbjct: 344 VEVKKNSKSPKKTPKKTAVKEESEESSGDEEEEVVKKKKSSKINKRKAKESSSDEEEEVE 403
Query: 487 NLERDLQKMDTKSSPKSAQMDEINLEA 567
+ K KSS KSA +E E+
Sbjct: 404 ESPKKKTKSPRKSSKKSAAKEESEEES 430
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 28.7 bits (61), Expect = 3.2
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 337 EKVKVKLCDEE--AALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 510
EK + K DE AAL+ + ++ + EED+ +S+ A L
Sbjct: 182 EKPEEKDIDESLNAALSDKKEKKEVASDKKKESKKDEEDINESMNAALSDERKKSASLAS 241
Query: 511 MDTK-SSPKSAQMDEINLEA 567
D K SS K DE NL A
Sbjct: 242 SDKKESSKKDESSDEANLSA 261
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/79 (18%), Positives = 38/79 (48%)
Frame = +1
Query: 340 KVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT 519
K+K +L + GR+ ID+ L++ +++ + + K IA LE ++ ++
Sbjct: 148 KIKDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEINLLKRRIALLEEEVARLKK 207
Query: 520 KSSPKSAQMDEINLEAGAE 576
++ ++++ + E E
Sbjct: 208 ENFRLTSELQRVRSELDQE 226
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 424 DHLMSEEDMKQSLKMAKEA-IANLERDLQKMDTKSSPKSAQMDEINLEAGA 573
DH + E+ K + + K+ + ++ K +TK SP++ +DE+ +A +
Sbjct: 179 DHCIGEKGKKINGSLEKDKKVKESGKEKIKKETKKSPQTMTLDEVQFDASS 229
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/79 (18%), Positives = 38/79 (48%)
Frame = +1
Query: 340 KVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT 519
K+K +L + GR+ ID+ L++ +++ + + K IA LE ++ ++
Sbjct: 148 KIKDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEINLLKRRIALLEEEVARLKK 207
Query: 520 KSSPKSAQMDEINLEAGAE 576
++ ++++ + E E
Sbjct: 208 ENFRLTSELQRVRSELDQE 226
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +1
Query: 127 DFSDTTV-RER---KSTAQAELDHHLNQNVDDGISNGRSLHAKKPII 255
D +TT+ RE+ KST Q ++D + + +D I N L ++KP I
Sbjct: 425 DQGNTTLKREKSIEKSTRQGKIDKSIEKLIDKSIDNTEKLSSQKPKI 471
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/79 (18%), Positives = 38/79 (48%)
Frame = +1
Query: 340 KVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT 519
K+K +L + GR+ ID+ L++ +++ + + K IA LE ++ ++
Sbjct: 148 KIKDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEINLLKRRIALLEEEVARLKK 207
Query: 520 KSSPKSAQMDEINLEAGAE 576
++ ++++ + E E
Sbjct: 208 ENFRLTSELQRVRSELDQE 226
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 364 EEAALTSTGMGRSTTTEDIDDHLMSE 441
E+A +T TG G+ +DDHL+S+
Sbjct: 628 EKANVTFTGEGKKEVYASVDDHLLSD 653
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 418 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 513
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1181 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1212
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 418 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 513
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1084 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1115
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 418 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 513
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1095 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1126
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +1
Query: 10 VFHP*AMETLIVLFAVIYTIIA--APAQ---LGEHLDTFKTLNGDFSDTTVRERKS 162
VF P +T V A++ +A AP + L EH DTF+ L D D ++RE S
Sbjct: 1558 VFVPVRRQTRPVAVALLTMALADGAPKRFLRLAEHDDTFQALLADIEDESLRESVS 1613
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = +1
Query: 412 EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSS 528
E+++D ++ +ED +++ + L+ DL+KM+ + +
Sbjct: 133 EELEDEMIDDEDEADLFNLSESDLKTLDADLKKMEEEEA 171
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 421 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT-KSSPKSAQMDEI 555
DD + +++KQ + MAK + + D+Q++ T +S+ K +M ++
Sbjct: 254 DDQFLMNKNLKQVMNMAK-GLKSSREDIQRLQTLRSNTKELEMVDL 298
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 439 EEDMKQSLKMAKEAIANLERDLQKMDTKS 525
++D+K+SLKM K ++ N R L K + KS
Sbjct: 16 DDDVKESLKMRKHSLVN--RQLSKKERKS 42
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 439 EEDMKQSLKMAKEAIANLERDLQKMDTKS 525
++D+K+SLKM K ++ N R L K + KS
Sbjct: 34 DDDVKESLKMRKHSLVN--RQLSKKERKS 60
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 103 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIV 258
D F +G+ ++ +RE+K + +L H L+ + ++ + S+H +PI++
Sbjct: 193 DPFDEDSGNSNENQLREKKLHKKEQLAHRLSSSSEEIVE--ASIHEDEPIVM 242
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 103 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIV 258
D F +G+ ++ +RE+K + +L H L+ + ++ + S+H +PI++
Sbjct: 193 DPFDEDSGNSNENQLREKKLHKKEQLAHRLSSSSEEIVE--ASIHEDEPIVM 242
>Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical
protein T28A8.3 protein.
Length = 621
Score = 27.5 bits (58), Expect = 7.3
Identities = 25/103 (24%), Positives = 43/103 (41%)
Frame = +1
Query: 118 LNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSD 297
L GD S + +RK A + DHH N D + +S +K + + D
Sbjct: 248 LEGDHSRSARNKRKYAAYRKTDHHHLSNAKDPKLSRKS--GRKSDLE--------FSDKS 297
Query: 298 EEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDD 426
+E + S+ CN + + C++ A G S E+++D
Sbjct: 298 DEDDVDSAISKCNFPKRAR-CEKSADPELHESGESDDDEEMED 339
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 7.3
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +1
Query: 220 NGRSLHAKKPIIVKKKIGYH---LYRDSDEE-KRLTSSRENCNEKVKVKLCDEEAALTST 387
N +S+ KK + +K+ G + + + +D E +R E E + EE T+
Sbjct: 585 NEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHANDERKREEQKRTAA 644
Query: 388 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEI 555
+S + + E ++ K KEA +LERDLQ + T+ +++++
Sbjct: 645 EFDQSRVARKLAGIEANYELLQNDYKSMKEARKDLERDLQDVITEKRRLEIRVEQL 700
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.5 bits (58), Expect = 7.3
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +1
Query: 220 NGRSLHAKKPIIVKKKIGYH---LYRDSDEE-KRLTSSRENCNEKVKVKLCDEEAALTST 387
N +S+ KK + +K+ G + + + +D E +R E E + EE T+
Sbjct: 585 NEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHANDERKREEQKRTAA 644
Query: 388 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEI 555
+S + + E ++ K KEA +LERDLQ + T+ +++++
Sbjct: 645 EFDQSRVARKLAGIEANYELLQNDYKSMKEARKDLERDLQDVITEKRRLEIRVEQL 700
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 510
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +1
Query: 361 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKE------AIANLERDLQKMDTK 522
DEE + +ED ++H+ EE K+ K+A++ IA +R L ++++
Sbjct: 1202 DEEEEIVMKSKRIIPDSEDEEEHIEQEEAQKKLEKVAEKPNTLMGMIAGRKRKLAQLESD 1261
Query: 523 SSPKSAQMDEINLE 564
SS +S D E
Sbjct: 1262 SSDESDDDDSAEKE 1275
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 510
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +1
Query: 361 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKE------AIANLERDLQKMDTK 522
DEE + +ED ++H+ EE K+ K+A++ IA +R L ++++
Sbjct: 1202 DEEEEIVMKSKRIIPDSEDEEEHIEQEEAQKKLEKVAEKPNTLMGMIAGRKRKLAQLESD 1261
Query: 523 SSPKSAQMDEINLE 564
SS +S D E
Sbjct: 1262 SSDESDDDDSAEKE 1275
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 376 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 510
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 379 TSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAI----ANLERDLQKMDTKSSPKSAQM 546
T T RS ++E ++++ + MK+SL +K+ A+L++DL +P S ++
Sbjct: 610 TPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDDRTPTSRKL 669
Query: 547 DEINLEAGAE 576
E N E ++
Sbjct: 670 SE-NFEENSD 678
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 379 TSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAI----ANLERDLQKMDTKSSPKSAQM 546
T T RS ++E ++++ + MK+SL +K+ A+L++DL +P S ++
Sbjct: 610 TPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDDRTPTSRKL 669
Query: 547 DEINLEAGAE 576
E N E ++
Sbjct: 670 SE-NFEENSD 678
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 379 TSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAI----ANLERDLQKMDTKSSPKSAQM 546
T T RS ++E ++++ + MK+SL +K+ A+L++DL +P S ++
Sbjct: 610 TPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDDRTPTSRKL 669
Query: 547 DEINLEAGAE 576
E N E ++
Sbjct: 670 SE-NFEENSD 678
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 379 TSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAI----ANLERDLQKMDTKSSPKSAQM 546
T T RS ++E ++++ + MK+SL +K+ A+L++DL +P S ++
Sbjct: 610 TPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDDRTPTSRKL 669
Query: 547 DEINLEAGAE 576
E N E ++
Sbjct: 670 SE-NFEENSD 678
>Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical
protein T04H1.6 protein.
Length = 368
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 298 EEKRLTSSRENCNEKVKVKLCDE 366
E++ S ENCN K +K C E
Sbjct: 173 EDQAFDKSTENCNHKNAIKFCPE 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.129 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,585,982
Number of Sequences: 27780
Number of extensions: 207468
Number of successful extensions: 659
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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