Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12c06
(578 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36105.1 68417.m05139 expressed protein 31 0.73
At3g28770.1 68416.m03591 expressed protein 31 0.73
At1g01690.1 68414.m00087 expressed protein 30 0.97
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.3
At1g69070.1 68414.m07903 expressed protein 30 1.3
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,... 30 1.3
At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha catal... 29 1.7
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 1.7
At3g62620.1 68416.m07034 sucrose-phosphatase-related contains we... 29 1.7
At1g22260.1 68414.m02782 expressed protein 29 1.7
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 29 2.2
At1g20290.1 68414.m02533 hypothetical protein 29 2.2
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 29 3.0
At1g18410.1 68414.m02299 kinesin motor protein-related similar t... 29 3.0
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 28 3.9
At5g16500.1 68418.m01928 protein kinase family protein contains ... 28 3.9
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 28 3.9
At2g22720.3 68415.m02692 expressed protein 28 3.9
At2g22720.2 68415.m02691 expressed protein 28 3.9
At2g22720.1 68415.m02693 expressed protein 28 3.9
At5g44900.1 68418.m05505 disease resistance protein (TIR class),... 28 5.2
At1g79150.1 68414.m09229 expressed protein ; expression supporte... 28 5.2
At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains ... 28 5.2
At5g60030.1 68418.m07527 expressed protein 27 6.8
At5g20610.1 68418.m02448 expressed protein 27 6.8
At5g65290.1 68418.m08212 LMBR1 integral membrane family protein ... 27 9.0
At5g16180.1 68418.m01891 hypothetical protein contains Pfam doma... 27 9.0
At4g26990.1 68417.m03883 expressed protein 27 9.0
At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containi... 27 9.0
At1g70810.1 68414.m08168 C2 domain-containing protein similar to... 27 9.0
At1g44810.1 68414.m05133 expressed protein contains Pfam profil... 27 9.0
At1g35660.1 68414.m04432 expressed protein 27 9.0
At1g08800.1 68414.m00979 expressed protein weak similarity to SP... 27 9.0
>At4g36105.1 68417.m05139 expressed protein
Length = 245
Score = 30.7 bits (66), Expect = 0.73
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +1
Query: 304 KRLTSSR-ENCNEKVKVKLCDEEAALTSTGM-GRSTTTEDIDDHLMSE-EDMKQSLKMAK 474
+R+T++ E C+ K KV +C+EE + + S E + +M+E E +K +L +
Sbjct: 109 RRVTAAESETCSHKEKVIICEEEITRKTVQIQNLSLRLEQTERIVMTECESLKNALTASN 168
Query: 475 EAIANL----ERDLQKMDTKSSPKSAQMD 549
+ L R Q ++ + KS Q++
Sbjct: 169 NVLDTLLSSSRRHFQTIEARLVAKSTQLE 197
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 388 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 510
G G S DI+ +L S+ED+K ++ AK A +++ L++
Sbjct: 337 GQGESIEDSDIEKNLESKEDVKSEVEAAKNAGSSMTGKLEE 377
>At1g01690.1 68414.m00087 expressed protein
Length = 742
Score = 30.3 bits (65), Expect = 0.97
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 148 RERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRE 327
R+++S + E+D+ N + D + ++LH I++K H R +KRL ++
Sbjct: 389 RKKRSPQEEEVDNENNSSEDSRLMGAKNLHLFLSEIMRKL--KHAIRKEKPDKRLLGKKK 446
Query: 328 NCNEKVKVK 354
+ + + K
Sbjct: 447 SFEKSLSTK 455
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 1.3
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 130 FSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKR 309
F TV E K A HHL D+ S SL ++P ++ K L + +
Sbjct: 162 FDPHTVSELKQFADRFSAHHL----DEACSKYISLWKQRPDLIDMKYSNQLAGVDNVSLQ 217
Query: 310 LTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED-IDDHLMSEEDMKQSLKMAKEAIA 486
S+R+ N + + ++ A TST T+D +D + + + + +++ +
Sbjct: 218 KDSTRQKQNAVNESEHQIQQCATTSTKRNEEEKTDDSLDVTSSTVKTTQHTRRLSVQDRI 277
Query: 487 NLERDLQKMDTKS 525
NL + QK ++ S
Sbjct: 278 NLFENKQKENSPS 290
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 29.9 bits (64), Expect = 1.3
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Frame = +1
Query: 241 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVK----LCDEEAALTSTG-MGRST 405
K + + K+IG + +K + S+ K+ K L D E + G +G S+
Sbjct: 84 KSSVFLDKRIGEQNDELGEFDKGIIRSQRQRQLKLAKKSMYNLSDGEEDVYEDGALGGSS 143
Query: 406 TTEDIDDHLMSEEDMK------QSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 567
+D D L+S+ED++ + K K N E D + + K M+EI +++
Sbjct: 144 VKDDFDSGLLSDEDLQDDDLEASASKRLKHLNRNREVDASGEEERRKSKKEVMEEIIMKS 203
>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 793
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 289 DSDEEKRLTSSRENCNEK--VKVKLCDEEAALTSTGMGRSTTTED--IDDHLMSEEDMKQ 456
DSD+ + E+ N++ + D+ +L + T E +DD ++EE +K
Sbjct: 407 DSDDNGMVLDRGEDSNQEGMYDQEFEDDGKSLNLRDIDTETQNESEMVDDEDLTEEQIKD 466
Query: 457 SLKMAKEAIANLERDLQKMDT 519
+K KEA A+ E +++T
Sbjct: 467 EIKKIKEAYADDEEFPDEVET 487
>At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha
catalytic subunit, putative similar to SP|O48653 DNA
polymerase alpha catalytic subunit (EC 2.7.7.7) {Oryza
sativa}; contains Pfam profiles: PF03175 DNA polymerase
type B, organellar and viral, PF00136 DNA polymerase
family B, PF03104 DNA polymerase family B, exonuclease
domain
Length = 1492
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 418 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQM 546
+D+ LM EEDMK+S + E + L D+ K D + + ++
Sbjct: 239 MDNELMKEEDMKESEVIPSETMELLGSDIVKEDGSNKIRKTEV 281
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 289 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL-- 462
D + +R + ++ E++KV+ E R +I++ L E++K +L
Sbjct: 719 DRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEE-LKKLENLKVALDD 777
Query: 463 -KMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAG 570
MAK ++NLER +K+ ++ DE++L+ G
Sbjct: 778 MSMAKMQLSNLERSWEKVSALKQKVVSRDDELDLQNG 814
>At3g62620.1 68416.m07034 sucrose-phosphatase-related contains weak
similarity to sucrose-phosphatase [Arabidopsis thaliana]
gi|11127757|gb|AAG31075
Length = 358
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +1
Query: 289 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 468
DS E+ ++ +N ++ L EEA+ GM ++ ED+D L+ + + + L++
Sbjct: 281 DSILEELNDATVDNSQWTAEIVLEAEEASKNQMGMRITSCLEDLDKQLLMQRILGKDLEV 340
Query: 469 AKEAIANLE 495
++ +LE
Sbjct: 341 LLHSVMHLE 349
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/95 (20%), Positives = 45/95 (47%)
Frame = +1
Query: 280 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS 459
L+R + ++ L S+ NEK+ D+E+ ++ R +T++ ID + +
Sbjct: 347 LFRVAATKEALESAGNELNEKIVELQNDKESLISQLSGLRCSTSQTIDKLESEAKGLVSK 406
Query: 460 LKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLE 564
A+ AI+ L+ +++ + + E++L+
Sbjct: 407 HADAESAISQLKEEMETLLESVKTSEDKKQELSLK 441
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 259 KKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI--DDHL 432
KK + Y + E++++ ++ +E + E R+T D D +
Sbjct: 732 KKALAYEKEANKLEQEKIRMEQKYRSEFQRFDEVKERCKAAEIEAKRATELADKARTDAV 791
Query: 433 MSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEIN 558
S+++ +S ++A E +A +ER ++++ K+ DE++
Sbjct: 792 TSQKEKSESQRLAMERLAQIERAERQVENLERQKTDLEDELD 833
>At1g20290.1 68414.m02533 hypothetical protein
Length = 382
Score = 29.1 bits (62), Expect = 2.2
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 94 EHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQ-NVDDGISNGRSLHAKKPIIVKKKI 270
EH D FK + +S E K A A H LNQ N D SN + +IV KKI
Sbjct: 95 EH-DQFKWKHV-YSHIGSAEEKDGAVAIWLHSLNQRNYPDLRSNECK---RNEVIVYKKI 149
Query: 271 GYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTG--MGRSTTTED 417
G + EEK + +EN N ++ + D+ TS G M TT E+
Sbjct: 150 GEASEENIHEEK--ITVKENTNGNAELFVVDKVNDETSEGTIMEERTTLEE 198
>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
identical to cDNA CIP4.1 mRNA for COP1-interacting
protein 4.1, GI:13160649
Length = 976
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 361 DEEAALTSTGMGRSTTTEDIDD-HLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKS 537
+ E + +G S ++ D +++ E + SL+ KEA NLE K KSS +S
Sbjct: 659 EAEENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLE----KSGKKSSKRS 714
Query: 538 AQMDEINLEAGAE 576
+ D +N+ A+
Sbjct: 715 KKKDSLNIVEEAQ 727
>At1g18410.1 68414.m02299 kinesin motor protein-related similar to
kinesin-related protein GB:AAF24855 GI:6692749 from
[Arabidopsis thaliana]
Length = 1140
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +1
Query: 409 TEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDE 552
T I+D + E M++ +A++A+ R+L+KM ++ ++E
Sbjct: 391 TAGIEDRVKELEQMRKDASVARKALEERVRELEKMGKEADAVKMNLEE 438
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 367 EAALTSTGMGRSTTTEDIDD-HLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQ 543
E + +G S ++ D +++ E + SL+ KEA NLE K KSS K+ +
Sbjct: 511 EENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLE----KSGKKSSKKTKK 566
Query: 544 MDEINLEAGAE 576
D +N+ A+
Sbjct: 567 KDSLNIVEEAQ 577
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +1
Query: 289 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 468
DSD+E S ++ E+ +++ E ++ +S + ID+ QSLK+
Sbjct: 437 DSDDESDSNSEKDQEEEQSQLEKARESSSSSSDS---GSERRSIDE----TNATAQSLKI 489
Query: 469 AKEAIANLERDLQKMDTKSSPKS 537
+ ++ E D +K+ +KSS KS
Sbjct: 490 SYSNYSSEEEDNEKLSSKSSCKS 512
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 28.3 bits (60), Expect = 3.9
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Frame = +1
Query: 103 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHL 282
D+ + D V+++ +T + + + ++ S+ AKKP +VK
Sbjct: 236 DSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKN--AKPA 293
Query: 283 YRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL 462
+DS + + E+ +EK K + + T S++ E D+ +E+ K
Sbjct: 294 AKDSSSSEEDSDEEESDDEKPPTK---KAKVSSKTSKQESSSDESSDE--SDKEESKDEK 348
Query: 463 KMAKEAIANLER-DLQKMDTKSSPKS 537
K+ +++E D ++ PK+
Sbjct: 349 VTPKKKDSDVEMVDAEQKSNAKQPKT 374
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 121 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 270
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 356 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 405
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 121 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 270
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 459 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 508
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 121 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 270
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 127 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 176
>At5g44900.1 68418.m05505 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 274
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +1
Query: 172 AELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKV 351
A L ++N +DD GR L I + ++ ++ K T+SR +E K+
Sbjct: 40 ALLKENVNVFIDDHELRGRDLDHLFSRIEESRVALTIF-----SKNFTNSRWCLDELAKI 94
Query: 352 KLCDEEAALTSTGMGRSTTTEDI 420
K C ++ +LT + T+D+
Sbjct: 95 KECVDQESLTVIPIFFKMKTDDV 117
>At1g79150.1 68414.m09229 expressed protein ; expression supported
by MPSS
Length = 495
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 421 DDHLMSEEDMKQSLKMAKEAIANLERDLQK---MDTKSSPKSAQMDEINLEAGAE 576
D+H++++ ++ K +K E+DL + + +P++A + E+ E AE
Sbjct: 130 DEHVLNKSQRREKAKKSKREAKKHEKDLPDEILQEEEETPQAAVLAEVKEELSAE 184
>At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains
similarity to NAD kinase [Homo sapiens]
gi|20070086|gb|AAM01195; contains Pfam domain, PF01513:
ATP-NAD kinase
Length = 985
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 244 KPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID 423
K +++ KK+G L ++ E +EN N V+ ++ D A + G ++ +D
Sbjct: 678 KTVLLLKKLGQELMEEAKEAASFLYHQENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTS 737
Query: 424 D 426
D
Sbjct: 738 D 738
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 286 RDSDEEKRLTSSRENC-NEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE-EDMKQS 459
R +++K+ + E+ +EKVK KL DE+ + + + ++ D+ ++ E E ++
Sbjct: 149 RKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDE 208
Query: 460 LKMAKEAIANLERDLQKMDTKSSPK 534
K A+ +D +D K K
Sbjct: 209 QKSAEIKEKKKNKDEDVVDEKEKEK 233
>At5g20610.1 68418.m02448 expressed protein
Length = 1164
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 361 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 504
D E+AL S M +T +ED +D + K + KE + + RD+
Sbjct: 503 DLESALKSVEMLEATASEDEEDRKKHGDKDKYFITPMKETVPSCSRDV 550
>At5g65290.1 68418.m08212 LMBR1 integral membrane family protein
contains Pfam PF04791: LMBR1-like conserved region
Length = 733
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 436 SEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDE 552
S++DM + A+EAI N +++ K SP S E
Sbjct: 592 SKDDMSRKYGSAREAITNKYAAIREQQNKHSPSSMTKPE 630
>At5g16180.1 68418.m01891 hypothetical protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 718
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/47 (21%), Positives = 27/47 (57%)
Frame = +1
Query: 418 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEIN 558
+++ + ++S K+A+ + R+++K+D S + QMD+++
Sbjct: 112 VEEKTFKALNRRESGVRGKKAMKKIVRNVEKLDEDSDSEETQMDDLS 158
>At4g26990.1 68417.m03883 expressed protein
Length = 474
Score = 27.1 bits (57), Expect = 9.0
Identities = 36/178 (20%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Frame = +1
Query: 28 METLIVLFAVIYTIIAAPAQLGEHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVD 207
++TL++L + I IIA L ++ T G ++T E + A + + Q
Sbjct: 83 VDTLVILSSTIVQIIAEGVSLPSNVTTANNEVGSATETLPSEPRLCAANKSTNVSTQG-- 140
Query: 208 DGISNGRSLHAKKPIIVKKKIGY-HLY-RDSDEEKRLTSSRENCNEKVK-VKLCDEEAAL 378
G ++ R A+ I+K+ + +Y +D+ + + +SS ++ +E+VK ++ +
Sbjct: 141 RGFNHKRQAGAQ---ILKRSVQIPEVYQQDNIDIQSSSSSLDSMSERVKPIEEDNLMPEP 197
Query: 379 TSTGMGRSTTTEDIDDHLMSEE-DMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMD 549
S G + D+L+SE + +L++ + +A + PK +++
Sbjct: 198 LSNGFHNAAAKPSSTDNLLSESTPVDDTLELCRGRVAASSTASVPIQAVKKPKEFKLN 255
>At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 743
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 418 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 567
++D +SE D + LK +++RDLQ K+ S +E+N EA
Sbjct: 671 MEDGKLSETD--ELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEA 718
>At1g70810.1 68414.m08168 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 165
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 244 KPIIVKKKIGYHLYRDSDEEKRLTSSRENC 333
KP + K+G D E KR+ +RENC
Sbjct: 91 KPFLEVHKMGLQELPDGTEIKRVVPNRENC 120
>At1g44810.1 68414.m05133 expressed protein contains Pfam profile:
PF04504 protein of unknown function, DUF573
Length = 296
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/59 (23%), Positives = 35/59 (59%)
Frame = +1
Query: 400 STTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAE 576
++++ED+D+ + S ED K+ + + + + E +L+ + T++ S + L++G+E
Sbjct: 15 ASSSEDVDEEISSGEDEKEHI--SNSSSSEEENELKDLSTQTL-NSPSTEAPTLDSGSE 70
>At1g35660.1 68414.m04432 expressed protein
Length = 1155
Score = 27.1 bits (57), Expect = 9.0
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 280 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEA--ALTSTGMGRSTTT--ED--IDDHLMSE 441
L +SDEE LT +VK+ +EEA +T T T ED +DH +S
Sbjct: 385 LILNSDEESDLTFESNGVQREVKITDLEEEALDPVTIADHENETVTFSEDKFTEDHSVSN 444
Query: 442 EDMKQSLKMAKEAIANLERDLQKMDTKSS 528
S++ EA +L ++L D+ S
Sbjct: 445 IVPLVSVRPKLEANVSLCKELLHSDSPDS 473
>At1g08800.1 68414.m00979 expressed protein weak similarity to
SP|Q02455 Myosin-like protein MLP1 {Saccharomyces
cerevisiae}; contains Pfam profile PF04576: Protein of
unknown function, DUF593
Length = 1113
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/115 (20%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +1
Query: 208 DGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTST 387
+G S G L K+ + +K+ LY++ +EE+ ++ N + +L +E+A+
Sbjct: 885 EGESEGDRL--KRQVDYDRKLLTGLYKELEEERSASAVATNQAMAMITRLQEEKASFQME 942
Query: 388 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKE-AIANLERDLQKMDTKSSPKSAQMD 549
+ E+ ++ M L + +E I +LE +++ ++ K ++D
Sbjct: 943 ALQNLRMMEEQAEYDMEAIQRLNDLLVEREKLIQDLEAEIEYFRDQTPQKKNKLD 997
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.129 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,798,243
Number of Sequences: 28952
Number of extensions: 187704
Number of successful extensions: 584
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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