Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b24
         (264 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    22   3.3  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         21   7.6  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         21   7.6  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         21   7.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    21   7.6  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 63  IFTHFTIIIRVLVVFVITDVI 1
           IFT FTI+  + V+F    +I
Sbjct: 511 IFTFFTIVATIAVLFSAPHII 531


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 79 TRTEQNLYSLHYHNPCTRSIRHHXRH 2
          T +E +LY+       +   RHH RH
Sbjct: 8  TYSEPSLYTTVSEPSASTKHRHHSRH 33


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 79 TRTEQNLYSLHYHNPCTRSIRHHXRH 2
          T +E +LY+       +   RHH RH
Sbjct: 8  TYSEPSLYTTVSEPSASTKHRHHSRH 33


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 79 TRTEQNLYSLHYHNPCTRSIRHHXRH 2
          T +E +LY+       +   RHH RH
Sbjct: 8  TYSEPSLYTTVSEPSASTKHRHHSRH 33


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 100 EIKSSLRTRTEQNLYSLHYHN 38
           +IKS  R +T +   S H H+
Sbjct: 291 KIKSFFRWKTNERFRSFHLHH 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,958
Number of Sequences: 2352
Number of extensions: 2137
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14420043
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)