Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b22
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004885-1|AAO45241.1| 1710|Drosophila melanogaster GH01875p pro...    30   2.6  
AE014134-3577|AAF57250.2| 1710|Drosophila melanogaster CG6448-PB...    30   2.6  
AE014134-3576|AAF57249.2| 1710|Drosophila melanogaster CG6448-PA...    30   2.6  
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro...    29   8.1  
AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA...    29   8.1  

>BT004885-1|AAO45241.1| 1710|Drosophila melanogaster GH01875p
           protein.
          Length = 1710

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 493 PASVRSAPHRAVLRCSSAAPAPSPRTRCTVS 401
           P+S+ S+P RA     SA+P PSP    + S
Sbjct: 432 PSSINSSPERASSESESASPLPSPTGSASTS 462


>AE014134-3577|AAF57250.2| 1710|Drosophila melanogaster CG6448-PB,
           isoform B protein.
          Length = 1710

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 493 PASVRSAPHRAVLRCSSAAPAPSPRTRCTVS 401
           P+S+ S+P RA     SA+P PSP    + S
Sbjct: 432 PSSINSSPERASSESESASPLPSPTGSASTS 462


>AE014134-3576|AAF57249.2| 1710|Drosophila melanogaster CG6448-PA,
           isoform A protein.
          Length = 1710

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 493 PASVRSAPHRAVLRCSSAAPAPSPRTRCTVS 401
           P+S+ S+P RA     SA+P PSP    + S
Sbjct: 432 PSSINSSPERASSESESASPLPSPTGSASTS 462


>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p
           protein.
          Length = 2112

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 499 HEPASVRSAPHRAVLRCSSAAPAPSPRTRCTVSVTSHD 386
           H+       P+  VL  SSA   P+P  R   S TSH+
Sbjct: 382 HQFMRANQPPNLTVLSASSATNTPTPTARQPKSATSHN 419


>AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA
           protein.
          Length = 2181

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 499 HEPASVRSAPHRAVLRCSSAAPAPSPRTRCTVSVTSHD 386
           H+       P+  VL  SSA   P+P  R   S TSH+
Sbjct: 382 HQFMRANQPPNLTVLSASSATNTPTPTARQPKSATSHN 419


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,389,143
Number of Sequences: 53049
Number of extensions: 323448
Number of successful extensions: 1361
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)