Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b19
         (572 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q944H7 Cluster: AT3g07900/F17A17_24; n=6; Arabidopsis t...    39   0.096
UniRef50_Q0IGB6 Cluster: Putative uncharacterized protein; n=1; ...    36   0.68 
UniRef50_Q4HIX8 Cluster: Flagellar hook protein FlgE; n=1; Campy...    35   1.6  
UniRef50_Q7P2Z8 Cluster: Putative uncharacterized protein FNV194...    34   2.7  
UniRef50_P96665 Cluster: YdeH protein; n=2; Bacillus|Rep: YdeH p...    33   3.6  
UniRef50_A4WKN7 Cluster: Putative uncharacterized protein precur...    33   4.8  
UniRef50_Q55ET2 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q6PGW1 Cluster: Tripartite motif-containing 35; n=8; Da...    32   8.3  
UniRef50_Q86IX1 Cluster: Similar to Oryza sativa (Rice). 36I5.3;...    32   8.3  

>UniRef50_Q944H7 Cluster: AT3g07900/F17A17_24; n=6; Arabidopsis
           thaliana|Rep: AT3g07900/F17A17_24 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 313

 Score = 38.7 bits (86), Expect = 0.096
 Identities = 22/81 (27%), Positives = 41/81 (50%)
 Frame = +2

Query: 251 QLATAQNYVASNNQYQPLISSINPNEIVKVILSRVLTSPHVHRVEVPEVKPQHNPDAKEP 430
           +L TA++ + SN +    +  +N  E+ +++  R L +P   R+     +P    +A +P
Sbjct: 123 ELLTAKSSMTSNERKLAGLCPLNAKEVTRLL--RALGAPRDARIYWAGGEPLGGKEALKP 180

Query: 431 INTNVPHVVNNYFIVSPEYLK 493
           + +  PH+ N Y I  P  LK
Sbjct: 181 LTSEFPHLYNKYDIALPLELK 201


>UniRef50_Q0IGB6 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1053

 Score = 35.9 bits (79), Expect = 0.68
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +2

Query: 209 LSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNEIVKVILSRVLTS 364
           +   Y  +K  P N +    N++  NN Y+P+I+SI+   +  VI  + LTS
Sbjct: 164 MQGLYAMAKERPKNPVIWLSNWLLLNNPYKPMITSIHTEPLYDVIAKQDLTS 215


>UniRef50_Q4HIX8 Cluster: Flagellar hook protein FlgE; n=1;
           Campylobacter lari RM2100|Rep: Flagellar hook protein
           FlgE - Campylobacter lari RM2100
          Length = 814

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 269 NYVASNNQYQPLISSINPNEIVKVILSRVLTSPHVHRVEVPEVKPQHNPDAKEPINTNVP 448
           N  A NN     I   N N I+K  +  V    +++     ++ P  NP+A  P N N+P
Sbjct: 389 NRTAFNNNPMAAILGTNANNIMKNNVQVVTAHEYIYSKNGVDIGPNPNPNANPPENANMP 448


>UniRef50_Q7P2Z8 Cluster: Putative uncharacterized protein FNV1941;
           n=1; Fusobacterium nucleatum subsp. vincentii ATCC
           49256|Rep: Putative uncharacterized protein FNV1941 -
           Fusobacterium nucleatum subsp. vincentii ATCC 49256
          Length = 637

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 185 YQTNGYTQLSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNE 328
           Y  NG  +L NTY   K +   +    +N +  NN Y   ISSIN N+
Sbjct: 228 YDNNGNLELENTYKNGKLVDTKEYDIEKNILNKNNNY---ISSINNNQ 272


>UniRef50_P96665 Cluster: YdeH protein; n=2; Bacillus|Rep: YdeH
           protein - Bacillus subtilis
          Length = 148

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -3

Query: 549 SGFVSGFLSFTFLKTVSLSFKYSGDTIK*LLTTCGTLVFIGSFASGLC*G 400
           SG    F+ FTFL  + + F      +  L++  GTLV I S A  LC G
Sbjct: 93  SGVYQCFIVFTFLGLIPIGFLIPNGFLTILVSIAGTLVSIASVAVTLCIG 142


>UniRef50_A4WKN7 Cluster: Putative uncharacterized protein
           precursor; n=1; Pyrobaculum arsenaticum DSM 13514|Rep:
           Putative uncharacterized protein precursor - Pyrobaculum
           arsenaticum (strain DSM 13514 / JCM 11321)
          Length = 677

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +2

Query: 260 TAQNYVASNNQYQPLISSINPNEIVKVILSRVLTSPHVHRVEV-PEVKPQHNPDAKEPIN 436
           TA NY AS  + +P++  I   ++   +L    +     RV + P   P + P   + + 
Sbjct: 406 TASNYTASLVEPKPILPPIPTTDVGINVLECTGSQCSERRVVIRPPPSPPYWPPVFDVVI 465

Query: 437 TNVPHVVNNYFIVSPEYLKL 496
           T     +NN F+VSP  L++
Sbjct: 466 TPKGESLNNVFVVSPAELRV 485


>UniRef50_Q55ET2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 281

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
 Frame = +2

Query: 215 NTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNEIV---KVILSRVLTSPHVH--- 376
           +T TP  + P +Q  T +N   +  +   +I+   P E +   +VI+++ L +P      
Sbjct: 78  STETPQPSAPIDQPKTTENEQQAEEKEDIVITEKQPIENIVDDEVIITKDLPAPTPKPSK 137

Query: 377 RVEVPEVKPQHNPDAKEPINTNVPHV 454
             +VP+ K + N D      TN P V
Sbjct: 138 EEDVPKAKEEQNNDTTTTTTTNTPTV 163


>UniRef50_Q6PGW1 Cluster: Tripartite motif-containing 35; n=8; Danio
           rerio|Rep: Tripartite motif-containing 35 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 672

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
 Frame = +2

Query: 188 QTNGYTQLS---NTYTP------SKNIPCNQLATAQNYVASNNQYQPLISSINPNE-IVK 337
           + N +TQL    NT+TP      +  +P   L T    V   N + PL+  +N +  +V+
Sbjct: 515 ELNTHTQLVEELNTHTPLVEDLNTHTLPVEDLNTHTPLVEDLNTHTPLVEELNTHTPLVE 574

Query: 338 VILSRVLTSPHVHRVEVPEVKPQ--HNPDAKEPINTNVPHVVNNY 466
            + +  L    ++    P V  +  H+P   E +NT+ PHV + Y
Sbjct: 575 DLNTHTLPVEDLN-THTPHVDDRYTHSPPV-EDLNTHTPHVDDRY 617


>UniRef50_Q86IX1 Cluster: Similar to Oryza sativa (Rice). 36I5.3;
           n=2; Dictyostelium discoideum|Rep: Similar to Oryza
           sativa (Rice). 36I5.3 - Dictyostelium discoideum (Slime
           mold)
          Length = 737

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
 Frame = +2

Query: 218 TYTPSKNIPCNQLATAQNYV-ASNNQYQPLISSINPN-----EIVKVILSRVL-TSPHVH 376
           T TP KNI  N      N    +NN    +I+  +P+     +I+K     VL +S  + 
Sbjct: 549 TTTPLKNISNNNSVIYNNSNNINNNNNNNIIAPKSPSPTTGQKIIKTNSGGVLKSSGGLS 608

Query: 377 RVEVPEVKPQHNPDAKEP---INTNVPHVVNNYFIVSPEYLKLN 499
               P  KP+H+  +KEP   ++ N+ ++  N   +   +L LN
Sbjct: 609 SKRSPSSKPKHSSSSKEPKESLSENLQNIYRNDCTIQLPFLTLN 652


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,943,851
Number of Sequences: 1657284
Number of extensions: 7660903
Number of successful extensions: 20022
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19981
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)