Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b19
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF467915-1|ABO43037.1|  898|Homo sapiens CDKN1A interacting zinc...    30   6.7  
AL590708-11|CAI13829.1|  898|Homo sapiens CDKN1A interacting zin...    30   6.7  
AL590708-10|CAI13830.1|  820|Homo sapiens CDKN1A interacting zin...    30   6.7  
AF234161-1|AAF37882.1|  817|Homo sapiens nuclear protein NP94b p...    30   6.7  
AF159025-1|AAF23231.1|  846|Homo sapiens nuclear protein NP94 pr...    30   6.7  
AB030835-1|BAA85783.1|  898|Homo sapiens Ciz1 protein.                 30   6.7  
AB065821-1|BAC06040.1|  318|Homo sapiens seven transmembrane hel...    29   8.8  

>EF467915-1|ABO43037.1|  898|Homo sapiens CDKN1A interacting zinc
           finger protein 1 protein.
          Length = 898

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 290 QYQPLISSINPNEIVKVILSRVLTS--PHVHRVEVPEVKPQHNPDA----KEPINTN-VP 448
           Q QP   S  P ++   +  +V T   P VH    P V+PQ +P A    + P  T+  P
Sbjct: 406 QVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQP 465

Query: 449 HVVNNYFIVSPE 484
           H      +++PE
Sbjct: 466 HTQPQVSLLAPE 477


>AL590708-11|CAI13829.1|  898|Homo sapiens CDKN1A interacting zinc
           finger protein 1 protein.
          Length = 898

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 290 QYQPLISSINPNEIVKVILSRVLTS--PHVHRVEVPEVKPQHNPDA----KEPINTN-VP 448
           Q QP   S  P ++   +  +V T   P VH    P V+PQ +P A    + P  T+  P
Sbjct: 406 QVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQP 465

Query: 449 HVVNNYFIVSPE 484
           H      +++PE
Sbjct: 466 HTQPQVSLLAPE 477


>AL590708-10|CAI13830.1|  820|Homo sapiens CDKN1A interacting zinc
           finger protein 1 protein.
          Length = 820

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 290 QYQPLISSINPNEIVKVILSRVLTS--PHVHRVEVPEVKPQHNPDA----KEPINTN-VP 448
           Q QP   S  P ++   +  +V T   P VH    P V+PQ +P A    + P  T+  P
Sbjct: 328 QVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQP 387

Query: 449 HVVNNYFIVSPE 484
           H      +++PE
Sbjct: 388 HTQPQVSLLAPE 399


>AF234161-1|AAF37882.1|  817|Homo sapiens nuclear protein NP94b
           protein.
          Length = 817

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 290 QYQPLISSINPNEIVKVILSRVLTS--PHVHRVEVPEVKPQHNPDA----KEPINTN-VP 448
           Q QP   S  P ++   +  +V T   P VH    P V+PQ +P A    + P  T+  P
Sbjct: 325 QVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQP 384

Query: 449 HVVNNYFIVSPE 484
           H      +++PE
Sbjct: 385 HTQPQVSLLAPE 396


>AF159025-1|AAF23231.1|  846|Homo sapiens nuclear protein NP94
           protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 290 QYQPLISSINPNEIVKVILSRVLTS--PHVHRVEVPEVKPQHNPDA----KEPINTN-VP 448
           Q QP   S  P ++   +  +V T   P VH    P V+PQ +P A    + P  T+  P
Sbjct: 354 QVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQP 413

Query: 449 HVVNNYFIVSPE 484
           H      +++PE
Sbjct: 414 HTQPQVSLLAPE 425


>AB030835-1|BAA85783.1|  898|Homo sapiens Ciz1 protein.
          Length = 898

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 290 QYQPLISSINPNEIVKVILSRVLTS--PHVHRVEVPEVKPQHNPDA----KEPINTN-VP 448
           Q QP   S  P ++   +  +V T   P VH    P V+PQ +P A    + P  T+  P
Sbjct: 406 QVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQP 465

Query: 449 HVVNNYFIVSPE 484
           H      +++PE
Sbjct: 466 HTQPQVSLLAPE 477


>AB065821-1|BAC06040.1|  318|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 531 FLSFTFLKTVSLSFKYSGDTIK*LLTTCGT 442
           FLS+TF+    L FK  G  +K  L+TCG+
Sbjct: 222 FLSYTFILRAVLRFKAEGAAVK-ALSTCGS 250


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,753,591
Number of Sequences: 237096
Number of extensions: 1164292
Number of successful extensions: 2096
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)