Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12b18
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 272 4e-74
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 144 9e-36
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 103 2e-23
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 96 6e-21
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 91 1e-19
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 82 1e-16
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 64 2e-11
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 63 5e-11
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 56 6e-09
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 45 1e-05
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 44 2e-05
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 42 1e-04
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 40 4e-04
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 40 5e-04
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 37 0.003
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 36 0.005
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 36 0.006
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 33 0.034
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 32 0.078
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar... 29 0.96
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 28 1.3
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 28 1.7
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 27 2.2
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.9
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 2.9
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 26 5.1
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.0
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 9.0
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.0
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 25 9.0
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 272 bits (667), Expect = 4e-74
Identities = 127/170 (74%), Positives = 152/170 (89%)
Frame = +1
Query: 253 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 432
E DLY ++K L+R LE L++QE +IK++ ++LK+E + AQEEVKRIQSVPLVIGQFLEA
Sbjct: 5 EEIDLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEA 64
Query: 433 VDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQ 612
+DQNT IVGSTTGSNY VRILST+DRELLKPSASVAL +HSNALVD+LPPEADSSISML+
Sbjct: 65 IDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLR 124
Query: 613 ADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
DE+PDV Y+D+GG+D QKQE+REAVELPLT +LYRQIGI+PPRGVL+Y
Sbjct: 125 PDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLY 174
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 144 bits (350), Expect = 9e-36
Identities = 69/163 (42%), Positives = 113/163 (69%), Gaps = 3/163 (1%)
Frame = +1
Query: 283 KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV---PLVIGQFLEAVDQNTGI 453
K+QR+ + L ++EEY+++++R LK + QEE R+ + P+ +G E +D + I
Sbjct: 71 KMQRIHDHLLMEEEYVQNQER-LKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAI 129
Query: 454 VGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDV 633
V ST G YYV I+S +D+++L+P SV LH + ++V +L + D I++++ D+ P
Sbjct: 130 V-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTE 188
Query: 634 QYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
Y+DIGG+++Q QEI+EAVELPLTH ELY ++GI+PP+GV++Y
Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILY 231
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 103 bits (248), Expect = 2e-23
Identities = 50/170 (29%), Positives = 98/170 (57%)
Frame = +1
Query: 253 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 432
E + KYK + + + ++ R+L K+Y ++++K +QSV +IG+ L+
Sbjct: 3 ERDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQ 62
Query: 433 VDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQ 612
+D IV +++G Y V + +D+ L V+L + ++ +LP E D + +
Sbjct: 63 LDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMS 122
Query: 613 ADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
++ D+ ++ +GG++ Q +E+RE +ELPL + EL+ ++GI+PP+GVL+Y
Sbjct: 123 IEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLY 172
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 95.9 bits (228), Expect = 6e-21
Identities = 47/144 (32%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Frame = +1
Query: 334 DEQRN-LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDR 510
+ QRN L +EE++ +Q +G+ ++ + +N +V Y V I ID
Sbjct: 42 EAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDI 101
Query: 511 ELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAV 690
+ +KP+ VAL S L+ +LP + D +S++ ++ PD Y +GG++ Q +EI+E +
Sbjct: 102 KEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVI 161
Query: 691 ELPLTHVELYRQIGIEPPRGVLMY 762
ELP+ H EL+ +GI P+G+L+Y
Sbjct: 162 ELPVKHPELFESLGIPQPKGILLY 185
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 91.5 bits (217), Expect = 1e-19
Identities = 52/226 (23%), Positives = 119/226 (52%), Gaps = 21/226 (9%)
Frame = +1
Query: 148 IETMEEIGIILPEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEY 327
+ T+EE+ + + ++++GL Q ++L ++ + L+ ++ ++ + +
Sbjct: 1 MSTLEELDALDQSQQGGSSNNEGLDGI-EQEILAAGIDELNSRTRLLENDIKVMKSEFQR 59
Query: 328 IKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVD-------------QNT------- 447
+ E+ + ++ QE++ + +P ++G +E +D QN+
Sbjct: 60 LTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGK 119
Query: 448 -GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEK 624
++ ++T ++ ++ ++ E L P + ++K S ++D LP E DS + ++ DEK
Sbjct: 120 SAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEK 179
Query: 625 PDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
P +YSDIGG+ Q +E+ EA+ LP+ + +R++G++PP+G LM+
Sbjct: 180 PTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMF 225
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 81.8 bits (193), Expect = 1e-16
Identities = 35/112 (31%), Positives = 66/112 (58%)
Frame = +1
Query: 427 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 606
++ ++N ++ + + V + + ++ V ++ A+ LPP+ D S++M
Sbjct: 108 QSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTM 167
Query: 607 LQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
+Q +EKPDV Y D+GG Q + +RE VELPL E + ++GI+PP+G+++Y
Sbjct: 168 MQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLY 219
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 64.5 bits (150), Expect = 2e-11
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = +1
Query: 619 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
E P+V +SDIGG + KQ+++E+VE PLTH E + ++G+ PP+GVL+Y
Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLY 588
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 631 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
V +S IGG+ Q +IR+ VELP + EL++ I PPRGVL+Y
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLY 319
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 62.9 bits (146), Expect = 5e-11
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +1
Query: 628 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
+V Y DIGG Q +IRE VELPL H +L++ IGI+PPRG+LMY
Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMY 264
Score = 52.0 bits (119), Expect = 9e-08
Identities = 19/48 (39%), Positives = 35/48 (72%)
Frame = +1
Query: 619 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
E P+V++ DIGG++ K+E+RE V++P+ + E + + G+ P +GVL +
Sbjct: 490 EVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFF 537
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 56.0 bits (129), Expect = 6e-09
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Frame = +1
Query: 313 VQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQN------TGIVGSTTGS 474
+ E+ ++ LK E +E++ Q + LV E D N T ++ + S
Sbjct: 60 ILEKVVEKVLDTLKAE---VEEKLASSQDLVLVDSDMEEQSDSNLMEVKDTNVINKSITS 116
Query: 475 NYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKP--DVQYSDI 648
+ L ID E K S S D S +A+ +P D+ SDI
Sbjct: 117 LWSSPNLKEIDGEDEKKSVGQESITGSAKRKDRRSKTNGSKRQKAEANREPPSDISLSDI 176
Query: 649 GGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
GG+D E+ E V +P+ H E+Y+ GI PPRGVL++
Sbjct: 177 GGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLH 214
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 625 PDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
P V +++IG + + + E++ A+ P+ ELY+ +GI P GVL++
Sbjct: 487 PGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLW 532
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +1
Query: 625 PDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
P V + DIGG++ K +R+ ++LPL EL+ Q G++P GVL+Y
Sbjct: 650 PKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLY 694
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 44.0 bits (99), Expect = 2e-05
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +1
Query: 631 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
+ + +GG+D +++E V LPL + E++++ ++PPRGVL +
Sbjct: 263 LSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFH 306
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +1
Query: 553 SNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIG 732
+N +D + S+++ EKP+V++ DI G++ K+ ++E V LP+ +L+ G
Sbjct: 100 ANEALDSDAKKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-G 158
Query: 733 IEPPRGVLMY 762
+P G+L+Y
Sbjct: 159 RKPWSGILLY 168
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +1
Query: 622 KPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
+ ++ ++ IGG++ +++E V LPL + E++ + I PPRGVL +
Sbjct: 366 RENLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFH 412
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 39.5 bits (88), Expect = 5e-04
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +1
Query: 622 KPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
K +++ DI GM K+ +R+ +E P+ + +Y+Q + P G+L++
Sbjct: 600 KSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLF 646
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 601 SMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIG--IEPPRGVLMY 762
S L + DV + DIGGMD ++ + V PL + E++ G + P+G+L+Y
Sbjct: 76 SQLVLPSEIDVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLY 131
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 631 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
V +SDI G+D K ++EAV P EL++ + EP +G+L++
Sbjct: 376 VYWSDIAGLDDAKNSLKEAVIYPFLRPELFQGLR-EPVQGMLLF 418
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 35.9 bits (79), Expect = 0.006
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLM 759
S M + ++++D+ G+D K+EI E V+ L + + Y ++G + PRG ++
Sbjct: 280 SRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAIL 334
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 33.5 bits (73), Expect = 0.034
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 628 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLM 759
+V++SD+ G+D K+E+ E V+ L + ++G + PRGVL+
Sbjct: 263 NVRFSDVQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLL 305
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 465 GAANYACILINCLK-KLSNDKRNRLYALYFFLCMQIFFLQVSLFIFNVLFLY 313
G Y C+++ + ++N +N+ A FF C+ + F Q++L+ +F Y
Sbjct: 182 GHFQYNCVMLGLVMYAIANLLKNQYVAATFFFCLALTFKQMALYFAPPIFFY 233
>SPBC336.08 |spc24||spindle pole body protein
Spc24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 198
Score = 28.7 bits (61), Expect = 0.96
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 235 QSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKD--EQRNLKKEYLHAQEEVKRI 393
QSF E E E TK+K L R LE E +K E +E L ++E RI
Sbjct: 36 QSFREKELEGSQTKFKVLSRKLEISTQAMESLKQTAESSQHAEEILSREKEKFRI 90
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 520 KPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY-SDIGGMDTQKQE--IREAV 690
KPS++V+ S+A DV+ + S+I+ D K DV + + D Q +E I+E
Sbjct: 244 KPSSNVSRGTPSSAHSDVIEISSSSAIARTSGDRKDDVLFDTSTQRRDNQTREMFIQEQA 303
Query: 691 EL 696
+L
Sbjct: 304 QL 305
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 396 LYALYFFLCMQIFFLQVSLFIFNVLFL 316
+++L+FFLCM+ FF +++ F LFL
Sbjct: 360 IFSLFFFLCMRNFFPGFTIY-FPALFL 385
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 481 YVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMD 660
+V L T + +A++ K D L + D + +Q+D KPDV+ SD MD
Sbjct: 227 FVLFLFTFEETTFDRAAAID-RKQIQISNDQLTVKEDFDLKDMQSDIKPDVEKSD--AMD 283
Query: 661 TQKQEI 678
K ++
Sbjct: 284 DSKMKV 289
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 386 FTSSCACKYSFFKFRCSSLMYSSCTSKNSNILW 288
F C S +F C ++ TSK N+LW
Sbjct: 313 FPEPSFCSASKIRFNCDETYAATITSKYPNVLW 345
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 184 EKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEY 363
EK+ + K L A + E+E L + Q+ LE +E K E++ LK+E
Sbjct: 593 EKEKKRDKKKQLKLAKEEERQRREAERLAEQ--AAQKALEAKRQEEARKKREEQRLKREQ 650
Query: 364 LHAQEEVKR 390
Q+E++R
Sbjct: 651 EKKQQELER 659
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 2.9
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = +1
Query: 178 LPEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKK 357
L +K + +TD+ +S +E S+++ TK + + + +K E+ L +
Sbjct: 317 LQDKLELLTDAYNREKRRARSLEERMSKEMLTKLGESNVDDGMAASRYDTVKREKERLSE 376
Query: 358 EYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASV 537
QE+ + IQSV + +D+ + I+ + +L+ + +LK
Sbjct: 377 HLKSLQEQYEHIQSVYKNV-----LLDRESYIMRLGNKISENNELLN--ENRVLKEKLQT 429
Query: 538 ALHKHSNALVDVLPPEADSS---ISMLQADEKPD 630
L K + + + A++S +SM +ADE+ D
Sbjct: 430 YLDKKESNVTSKIKSTAENSSKPLSMNEADERKD 463
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 352 KKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGI 453
K ++ A E+ + VPL +F + VDQN G+
Sbjct: 51 KSKHSEAVVEILKSAKVPLKNKEFSDLVDQNIGV 84
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 382 VKRIQSVPLVIGQFLEAVDQN 444
+K+ +SVP + GQF+E V+ N
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN 213
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 259 EDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 399
E+ + QR +E QEE IK+E+ ++E +EEV +S
Sbjct: 333 EEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEE--EEEEEVPNYES 377
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.0
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +1
Query: 436 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 615
D+NT + SN + I ELL PS A+ +SN D+ P SS + A
Sbjct: 14 DENTDALFKLHTSNRKSANMFGIKSELLNPSELSAVGSYSN---DICPNRQSSSST--AA 68
Query: 616 DEKPDVQYSD 645
D P S+
Sbjct: 69 DTSPSTNASN 78
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 376 EEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHK 549
EE Q P +GQ+ + + Q I Y++RI+ ++LK S + +HK
Sbjct: 212 EENLDFQESPHYLGQYKKLLSQAMDIF-----KPYFIRIIKQTTDQVLKDSKKMDVHK 264
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,964,538
Number of Sequences: 5004
Number of extensions: 59022
Number of successful extensions: 220
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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