Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12b18
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 273 1e-73
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 140 7e-34
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 108 4e-24
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 104 6e-23
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 104 6e-23
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 99 4e-21
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 99 4e-21
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 93 3e-19
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 90 1e-18
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 82 5e-16
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 58 9e-09
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 39 0.003
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 39 0.004
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 39 0.004
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 39 0.004
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 39 0.004
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 39 0.004
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 34 0.13
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 33 0.22
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 33 0.22
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 32 0.51
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 31 0.68
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 31 0.68
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 31 0.68
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 31 0.68
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 31 0.68
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 30 1.6
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 30 1.6
U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore co... 30 2.1
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 30 2.1
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical p... 29 3.6
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 3.6
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 3.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.6
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 29 3.6
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 29 3.6
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 3.6
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 3.6
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 29 3.6
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 29 4.8
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 4.8
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 4.8
L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna polym... 29 4.8
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 4.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 6.3
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 8.4
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 8.4
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 273 bits (669), Expect = 1e-73
Identities = 132/169 (78%), Positives = 145/169 (85%)
Frame = +1
Query: 256 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAV 435
S D Y K L+R L L+V E+YIK E RNL+KE LHAQEEVKRIQSVPLVIGQFLEAV
Sbjct: 33 SSDDYIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAV 92
Query: 436 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 615
DQN IVGSTTGSNYYVR+LS +DRELLKP SVALHK+SNALVDVLPPEADSSI ML+
Sbjct: 93 DQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRP 152
Query: 616 DEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
DEKPD+ Y DIGG+D QKQE+REAVELPLTH ELY+QIGI+PPRGVLMY
Sbjct: 153 DEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMY 201
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 140 bits (340), Expect = 7e-34
Identities = 62/165 (37%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
Frame = +1
Query: 274 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVK--RIQSVPLVIGQFLEAVDQNT 447
K K +R+ ++L +++E+I++++R +E +E K ++ P+ +G E +D
Sbjct: 64 KLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQH 123
Query: 448 GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKP 627
IV + GS +YV I+S +D+E L+P SV L+ ++A++ VL + D +S+++ ++ P
Sbjct: 124 AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAP 183
Query: 628 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
Y+D+GG+D Q QEI+EAVELPLTH E Y ++GI PP+GV++Y
Sbjct: 184 QETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILY 228
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 108 bits (260), Expect = 4e-24
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 18/212 (8%)
Frame = +1
Query: 181 PEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKE 360
P KD + ++ + A + ++ +EDL ++ L + + + + I LK+
Sbjct: 6 PPKDGKNPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKER 65
Query: 361 YLHAQEEVKRIQSVPLVIGQFLEAVD--QNT----------------GIVGSTTGSNYYV 486
E +K +++P ++ +E +D NT ++ ++T + Y++
Sbjct: 66 IKENTERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFL 125
Query: 487 RILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQ 666
++ +D + LKP V ++K S +++ LP E DS + ++ DE+P QYSDIGG D Q
Sbjct: 126 PVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQ 185
Query: 667 KQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
QE+ EAV LP+TH + + +GI PP+GVLMY
Sbjct: 186 IQELIEAVVLPMTHKDRFVNLGIHPPKGVLMY 217
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 104 bits (250), Expect = 6e-23
Identities = 51/178 (28%), Positives = 105/178 (58%)
Frame = +1
Query: 229 GPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 408
GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ ++K +QSV
Sbjct: 6 GPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 64
Query: 409 VIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEA 588
++G+ L+ + + IV +T G Y V +I++E LK V+L + ++ LP E
Sbjct: 65 IVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREV 124
Query: 589 DSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
D + + ++ ++ YSD+GG+ Q +E+RE VELPL + EL++++GI PP+G L++
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLF 182
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 104 bits (250), Expect = 6e-23
Identities = 51/178 (28%), Positives = 105/178 (58%)
Frame = +1
Query: 229 GPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 408
GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ ++K +QSV
Sbjct: 14 GPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 72
Query: 409 VIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEA 588
++G+ L+ + + IV +T G Y V +I++E LK V+L + ++ LP E
Sbjct: 73 IVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREV 132
Query: 589 DSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
D + + ++ ++ YSD+GG+ Q +E+RE VELPL + EL++++GI PP+G L++
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLF 190
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 98.7 bits (235), Expect = 4e-21
Identities = 47/164 (28%), Positives = 90/164 (54%)
Frame = +1
Query: 271 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 450
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 31 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 90
Query: 451 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 630
+V + Y V + +++D L VAL + A+ +VLP + D +S++ ++ PD
Sbjct: 91 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPD 150
Query: 631 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
Y +GG+DTQ +EI+E +ELP+ H EL+ +GI P+GVL+Y
Sbjct: 151 STYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 194
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 98.7 bits (235), Expect = 4e-21
Identities = 47/164 (28%), Positives = 90/164 (54%)
Frame = +1
Query: 271 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 450
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 52 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 111
Query: 451 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 630
+V + Y V + +++D L VAL + A+ +VLP + D +S++ ++ PD
Sbjct: 112 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPD 171
Query: 631 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
Y +GG+DTQ +EI+E +ELP+ H EL+ +GI P+GVL+Y
Sbjct: 172 STYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 215
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 92.7 bits (220), Expect = 3e-19
Identities = 55/172 (31%), Positives = 97/172 (56%), Gaps = 12/172 (6%)
Frame = +1
Query: 283 KLQRMLEFLEVQEEYIKDEQ----RNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 450
K+ R+ ++L++++E+I + R L + Q+ V+ ++ P + + E D
Sbjct: 52 KMNRIHDYLQLEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKH 111
Query: 451 IVGSTTGSN--YYVRILSTIDRELLKPSASVALHKHS------NALVDVLPPEADSSISM 606
V GS +YV ILS +D++LL+ +A V + +A+V VL + DS+
Sbjct: 112 AVVVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMG 171
Query: 607 LQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
+ ++ P + DIGG ++Q QE++E+VELPLTH E Y ++GI P+GV++Y
Sbjct: 172 HKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILY 223
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 90.2 bits (214), Expect = 1e-18
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Frame = +1
Query: 340 QRN-LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDREL 516
QRN L + +EE++++ +G+ +A+D+ +V Y V + +ID
Sbjct: 58 QRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINS 117
Query: 517 LKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVEL 696
L A VAL S AL +LP + D +S++ ++ PD Y +GG+D Q +EI+E +EL
Sbjct: 118 LNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIEL 177
Query: 697 PLTHVELYRQIGIEPPRGVLMY 762
P+ H EL+ +GI P+GVL++
Sbjct: 178 PVKHPELFDALGIAQPKGVLLF 199
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 81.8 bits (193), Expect = 5e-16
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +1
Query: 574 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGV 753
LP + D +++M+Q +EKPDV YSD+GG Q +++RE VE PL H E Y +GIEPP+GV
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGV 214
Query: 754 LMY 762
L+Y
Sbjct: 215 LLY 217
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 59.3 bits (137), Expect = 3e-09
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +1
Query: 628 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
D+ Y D+GG+ Q +I+E VELPL H +L++ IGI+PPRG+L++
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLF 250
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1
Query: 619 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
E P+ +SDIGG+ K+E++E V+ P+ H E Y + G++P RGVL Y
Sbjct: 476 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 523
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 57.6 bits (133), Expect = 9e-09
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +1
Query: 628 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
+V Y D+GG+ Q +I+E VELPL H +L++ IG++PPRG+L++
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLF 249
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +1
Query: 499 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEI 678
TID E+L S +V + A+ P ++ E P+ +SDIGG+ K+E+
Sbjct: 441 TIDAEVLN-SLAVTMENFRFAMGKSSPSALREAVV-----ETPNTTWSDIGGLQNVKREL 494
Query: 679 REAVELPLTHVELYRQIGIEPPRGVLMY 762
+E V+ P+ H E Y + G++P RGVL Y
Sbjct: 495 QELVQYPVEHPEKYLKFGMQPSRGVLFY 522
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 57.6 bits (133), Expect = 9e-09
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +1
Query: 628 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
+V Y D+GG+ Q +I+E VELPL H +L++ IG++PPRG+L++
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLF 249
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +1
Query: 499 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEI 678
TID E+L S +V + A+ P ++ E P+ +SDIGG+ K+E+
Sbjct: 441 TIDAEVLN-SLAVTMENFRFAMGKSSPSALREAVV-----ETPNTTWSDIGGLQNVKREL 494
Query: 679 REAVELPLTHVELYRQIGIEPPRGVLMY 762
+E V+ P+ H E Y + G++P RGVL Y
Sbjct: 495 QELVQYPVEHPEKYLKFGMQPSRGVLFY 522
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1
Query: 619 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
E P+V ++DIGG + K EI++AV P H E + + GI+PP G+L+Y
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/48 (35%), Positives = 34/48 (70%)
Frame = +1
Query: 619 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
EKP+V+++DI G++ K+ ++EAV LP+ +L+ +P +G+L++
Sbjct: 111 EKPNVKWTDIAGLEGAKEALKEAVILPIKFPQLFTG-NRKPWQGILLF 157
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+GV+ Y
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 431
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+GV+ Y
Sbjct: 375 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 429
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+GV+ Y
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 431
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+GV+ Y
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 431
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+GV+ Y
Sbjct: 375 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 429
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+GV+ Y
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 431
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 592 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+GV+ Y
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 431
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/87 (26%), Positives = 42/87 (48%)
Frame = +1
Query: 298 LEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSN 477
+E L + E I D + L + + +EE K+I+ + + ++ A +G+ G G N
Sbjct: 780 VECLRLLNEIISDFDQIL--DQILDREEFKKIEKIKTISTTYMVA----SGLAGRECGDN 833
Query: 478 YYVRILSTIDRELLKPSASVALHKHSN 558
+V ++ RELL S +H +N
Sbjct: 834 SHVEAIALFARELLVKLESTNIHSFNN 860
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +1
Query: 643 DIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
D+GGM QK+ + + + P + +L+ +G+ +G+L++
Sbjct: 3 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLH 42
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +1
Query: 643 DIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
D+GGM QK+ + + + P + +L+ +G+ +G+L++
Sbjct: 729 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLH 768
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +1
Query: 643 DIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
D+GGM QK+ + + + P + +L+ +G+ +G+L++
Sbjct: 729 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLH 768
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 619 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
E + +IGG + E+++ + LPL + PPRG+L+Y
Sbjct: 73 EDVGADWDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLY 120
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 619 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 762
E + +IGG + E+++ + LPL + PPRG+L+Y
Sbjct: 76 EDVGADWDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLY 123
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 580 PEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLM 759
P ++S + + V++ IGG D Q E+ + + L + + +G++PPRG ++
Sbjct: 186 PRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIV 244
Query: 760 Y 762
+
Sbjct: 245 H 245
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 625 PDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIE-PPRGVLM 759
PDV + DIG + ++++ ++ P+ + + +GI+ P+G+L+
Sbjct: 528 PDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILL 573
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 580 PEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLM 759
P ++S + + V++ IGG D Q E+ + + L + + +G++PPRG ++
Sbjct: 186 PRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIV 244
Query: 760 Y 762
+
Sbjct: 245 H 245
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 625 PDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIE-PPRGVLM 759
PDV + DIG + ++++ ++ P+ + + +GI+ P+G+L+
Sbjct: 528 PDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILL 573
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 511 ELLKPSASVALHKHSNALVDVLPPEADSSIS-MLQADEKPDVQYSDIGGMDTQKQEIREA 687
+L+K V + + + + L + +S+ + + A + P+V++ D+GG++ KQ + E+
Sbjct: 421 KLVKNGKKVKIEEKEEKVYEDLIDKRNSNFADAIGAPKIPNVRWEDVGGLEETKQTVLES 480
Query: 688 VELPLTHVELYRQIGI 735
+ L ++ GI
Sbjct: 481 IRTNLFGSRALKRSGI 496
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 511 ELLKPSASVALHKHSNALVDVLPPEADSSIS-MLQADEKPDVQYSDIGGMDTQKQEIREA 687
+L+K V + + + + L + +S+ + + A + P+V++ D+GG++ KQ + E+
Sbjct: 421 KLVKNGKKVKIEEKEEKVYEDLIDKRNSNFADAIGAPKIPNVRWEDVGGLEETKQTVLES 480
Query: 688 VELPLTHVELYRQIGI 735
+ L ++ GI
Sbjct: 481 IRTNLFGSRALKRSGI 496
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 511 ELLKPSASVALHKHSNALVDVLPPEADSSIS-MLQADEKPDVQYSDIGGMDTQKQEIREA 687
+L+K V + + + + L + +S+ + + A + P+V++ D+GG++ KQ + E+
Sbjct: 421 KLVKNGKKVKIEEKEEKVYEDLIDKRNSNFADAIGAPKIPNVRWEDVGGLEETKQTVLES 480
Query: 688 VELPLTHVELYRQIGI 735
+ L ++ GI
Sbjct: 481 IRTNLFGSRALKRSGI 496
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +1
Query: 436 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 615
+Q G+ S Y++R++ T K +A +K + LPP ++++
Sbjct: 78 NQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKSVQQYLRKLPPSTSKEVTIIPV 137
Query: 616 DEKPD 630
KPD
Sbjct: 138 KMKPD 142
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +1
Query: 436 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 615
+Q G+ S Y++R++ T K +A +K + LPP ++++
Sbjct: 78 NQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKSVQQYLRKLPPSTSKEVTIIPV 137
Query: 616 DEKPD 630
KPD
Sbjct: 138 KMKPD 142
>U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore
complex protein protein12 protein.
Length = 1847
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +1
Query: 493 LSTIDRELLKPSASVALHKHSNALVDVL--PPEADSSISMLQADEKPDVQYSDIGGMDTQ 666
L+ + LL PS V L HS VL ++M + + D+ +D +
Sbjct: 232 LAVVANLLLVPSQDVYLPVHSVLPFQVLIVKQRGTEIVNMPNPSYELQIDGGDVASLDKK 291
Query: 667 KQEIRE------AVELPLTHVELYRQIGIEPPRGVL 756
+R AV L +HV++ + G+ PP V+
Sbjct: 292 SSSVRALTIGNTAVHLLSSHVDVRAKAGLRPPSTVI 327
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 TIDRE-LLKPSAS-VALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIG-GMDTQK 669
T+ +E L+K S ++ A+VDV D S + Q E + +YS ++ Q
Sbjct: 503 TLKQEYLIKEECSEISEDSEEGAIVDVASSSGDLSENRDQKSENEEFEYSPHQLTLEQQT 562
Query: 670 QEIREAVELPLTHVELYRQIGI 735
I +L + H + YRQI +
Sbjct: 563 YLISSMAQLSIFHFQRYRQIRV 584
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 TIDRE-LLKPSAS-VALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIG-GMDTQK 669
T+ +E L+K S ++ A+VDV D S + Q E + +YS ++ Q
Sbjct: 505 TLKQEYLIKEECSEISEDSEEGAIVDVASSSGDLSENRDQKSENEEFEYSPHQLTLEQQT 564
Query: 670 QEIREAVELPLTHVELYRQIGI 735
I +L + H + YRQI +
Sbjct: 565 YLISSMAQLSIFHFQRYRQIRV 586
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 394 QSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDV 573
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 574 LPPEAD 591
P D
Sbjct: 503 TPKPTD 508
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 394 QSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDV 573
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 574 LPPEAD 591
P D
Sbjct: 503 TPKPTD 508
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 233 GPANAKPFESVTWSSFSGKIIPISSIVSIAKRFRVLS 123
G N F WS+F K + SI S+ RFR LS
Sbjct: 436 GNINTALFTKGKWSTFFPKSLNFGSIPSLPSRFRTLS 472
>Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical
protein T22C1.11 protein.
Length = 444
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 313 VQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIG 417
V+EE + E+ ++ KEY A + V +++ + LV+G
Sbjct: 216 VEEEVAQIEEEDVSKEYFDASKFVAQLEEMGLVLG 250
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 262 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 399
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 262 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 399
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 292 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 396
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 292 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 396
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 292 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 396
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 582 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 615
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 292 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 396
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 394 QSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDV 573
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 574 LPPEAD 591
P D
Sbjct: 503 TPKPTD 508
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 394 QSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDV 573
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 574 LPPEAD 591
P D
Sbjct: 503 TPKPTD 508
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 262 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 399
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 262 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 399
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 262 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 399
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 244 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 414
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 244 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 414
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 244 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 414
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 347 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 404
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 401 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 297
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 401 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 297
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna
polymerase kappa) homologprotein 1 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 274 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGI 453
++ + + LE L+++E +++ K Y H + R ++V + +F V+Q TG+
Sbjct: 214 RFDENENTLEDLKIEESICPKCEKSRKIYYDHVEFGTGREEAVREI--RF--RVEQLTGL 269
Query: 454 VGST-TGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVL 576
S SN+ +L+ I +L KP+ L NA+++ L
Sbjct: 270 TCSAGIASNF---MLAKICSDLNKPNGQYVLENDKNAIMEFL 308
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 244 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 414
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 247 ELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKK--EYLHAQEEVKRIQ 396
E E+E+ K ++ +E ++ +EE +K E+ +KK E L A+EE +++
Sbjct: 889 EKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE 940
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 244 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 396
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 280 KKLQRMLEFLEVQEEYIKDEQR---NLKKEYLHAQEEVKRIQS 399
KKLQ + + +EVQ+E IK+ + NL+K + E+K +S
Sbjct: 324 KKLQELRDEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSES 366
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 244 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 396
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,346,749
Number of Sequences: 27780
Number of extensions: 330775
Number of successful extensions: 1219
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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