Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12b15
(506 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08) 56 2e-08
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20) 36 0.019
SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05) 35 0.034
SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07) 34 0.077
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20) 32 0.31
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 32 0.31
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 31 0.41
SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18) 31 0.41
SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21) 31 0.55
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 30 0.95
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 1.5
SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2) 29 1.7
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047) 29 2.2
SB_16879| Best HMM Match : Stig1 (HMM E-Value=1) 29 2.2
SB_9870| Best HMM Match : GspM (HMM E-Value=1.9) 29 2.2
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 29 2.9
SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12) 29 2.9
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_19020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_51573| Best HMM Match : UCR_TM (HMM E-Value=6.7) 28 5.1
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_9457| Best HMM Match : PHD (HMM E-Value=3.3e-08) 28 5.1
SB_31077| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 27 6.7
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_34777| Best HMM Match : VWA (HMM E-Value=0) 27 6.7
SB_32053| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 27 8.9
SB_24945| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_11943| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 8.9
SB_46206| Best HMM Match : HLH (HMM E-Value=5e-18) 27 8.9
SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08)
Length = 125
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +3
Query: 90 KAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQH 269
+A+ A + +S+ AS + RD + + Y +L+++VP +P R+ISK+E++Q+
Sbjct: 14 EALRATIRSASSITR-ASIFSEFERDSNDNMSECY-ERLKNMVPNVPVGRRISKVEILQY 71
Query: 270 VIDYICDLQSALENHPA 320
VIDYI DLQ+ALEN A
Sbjct: 72 VIDYILDLQTALENQTA 88
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 189 MYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHP 317
M S+L+ LVP + ++SK++VI+ I YI LQ AL P
Sbjct: 455 MEYSRLRSLVPSVASKSRVSKIQVIEEAIKYIAQLQDALRTQP 497
>SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +3
Query: 129 PAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 308
P+ + R +R R+ + S L+ +P+ P+ +K+SK+E ++ + YI LQS +E
Sbjct: 69 PSAVARRNERERNRVRL-VNDGFSSLRQHIPYFPEKKKLSKVETLRCAVAYIKHLQSLIE 127
Query: 309 NHPA 320
+ A
Sbjct: 128 EYDA 131
>SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20)
Length = 232
Score = 35.9 bits (79), Expect = 0.019
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 102 AVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDY 281
AV PA+ + R R R ++ +L+ VP PKN+K+SK++ ++ I+Y
Sbjct: 54 AVSTAKQKEPAVVARRNARERKRVKLVNDGFM-RLRKHVPTDPKNKKLSKVKTLRSAIEY 112
Query: 282 ICDLQSAL 305
I LQ L
Sbjct: 113 IRHLQHLL 120
>SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05)
Length = 149
Score = 35.1 bits (77), Expect = 0.034
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 153 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYI 284
QR R AE Y KL+++VP + + +K++KL+ IQ +YI
Sbjct: 87 QRDRLRSEAEQNAY-KKLREIVPALKEQKKVTKLDTIQQTCEYI 129
>SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1432
Score = 33.9 bits (74), Expect = 0.077
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 180 EIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQ 296
++Q +L+ +VP +P R I K ++QH D+ICDL+
Sbjct: 829 QMQDAFCQLRSMVPDLP--RAIGKARLLQHAADFICDLK 865
>SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07)
Length = 105
Score = 33.9 bits (74), Expect = 0.077
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 150 VQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQ 296
+ R R E A I+ L+ L L+P NRK+SK ++Q I+YI LQ
Sbjct: 41 ISRQRKREYA-IREALNHLNSLLPLDNPNRKLSKNMILQTAIEYIRSLQ 88
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2
Query: 374 AAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKT 490
A PPS+ T +P AQT + AN PP TE T P +T
Sbjct: 801 ANTPPSQTTEAYTPPAQT-TEANTPPAQTTEANTPPVQT 838
Score = 31.5 bits (68), Expect = 0.41
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 374 AAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKT 490
A PP++ T +P AQT + AN PP TE+ P +T
Sbjct: 811 AYTPPAQTTEANTPPAQT-TEANTPPVQTTESYNTPTET 848
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAPEK 487
PP EE + P P ++P S+ HPP + + +AP +
Sbjct: 725 PPPEEVSLPPP-DESPPSSKHPPTVSPSSSSAPPR 758
>SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20)
Length = 153
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 204 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 311
L+ +P P N+K+SK+E ++ I+YI LQ L +
Sbjct: 94 LRKHIPTTPVNKKLSKVETLRTAIEYIKHLQRILND 129
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 31.9 bits (69), Expect = 0.31
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +2
Query: 341 RRLSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKP 496
R + AT + PP +T P TP S N PP T P T+P
Sbjct: 13 RPVDQATPKPPQPTPPKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQP 64
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKP 496
PP ET P P ++ P + P +APE KP
Sbjct: 165 PPQPETVPPQPGSEEPEPVSQAPEPPKPKTSAPEPPKP 202
>SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18)
Length = 179
Score = 31.5 bits (68), Expect = 0.41
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 138 ASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKN-RKISKLEVIQHVIDYICDLQSALEN 311
AS R ++ R N +++ K VP + +N +K+SK+EV++ IDYI L L N
Sbjct: 43 ASARERKRRHVLNNALELLRKK----VPCVDQNPQKLSKIEVLRLAIDYIAMLSCYLNN 97
>SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21)
Length = 143
Score = 31.1 bits (67), Expect = 0.55
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 114 TGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDL 293
TG S A+ +R+R + + L+ L+P P +RK+SK+E ++ YI L
Sbjct: 46 TGLSKQRQAANARERNR---THSVNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHL 102
Query: 294 QSAL 305
+ L
Sbjct: 103 STIL 106
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 30.3 bits (65), Expect = 0.95
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAP 481
PP+ + P+P + P +A++PP + N TAP
Sbjct: 201 PPTAPSYPPTPSSYPPIAASYPPTAPSYNPTAP 233
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 359 TLRSVAAAPPSEETARPS--PYAQTPSSANHPPHTNTENQTAP 481
T + P A PS PY TP+ A PHT +Q AP
Sbjct: 36 TSLTAPVVPLPTPVAPPSTVPYTATPAPAQQAPHTTAASQPAP 78
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +2
Query: 347 LSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
LS+ V APP + P+ +A P + PP T T P P+
Sbjct: 295 LSLMAELGVGEAPPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPS 345
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 25.8 bits (54), Expect(2) = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 362 LRSVAAAPPSEETARPSPYAQTPSSANHPP 451
+R A + S+ T P PY +T S A PP
Sbjct: 1205 IREPADSQTSKCTTSPQPYPETKSRAPPPP 1234
Score = 22.2 bits (45), Expect(2) = 1.5
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
Frame = +2
Query: 443 HPPHTNTEN---QTAPEKTK 493
HP HT+ EN Q +PE K
Sbjct: 1272 HPDHTSEENLTFQASPETNK 1291
>SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2)
Length = 436
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 LSVATLRSVAAAPPSEETARPSPYAQTPSSAN-HPPHT 457
+S+AT APP+ A P P A TP + PP T
Sbjct: 6 VSMATTPIPTTAPPASIEATPEPIAATPKAVKIEPPQT 43
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 413 PYAQTPSSANHPPHTNTENQTAPEKTKP 496
P TP PP T E T P +TKP
Sbjct: 363 PPRTTPEPTTEPPQTTPEPTTEPSRTKP 390
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 413 PYAQTPSSANHPPHTNTENQTAPEKTKP 496
P TP PP T E T P +TKP
Sbjct: 1093 PPRTTPEPTTEPPRTTPEPTTEPSRTKP 1120
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +2
Query: 386 PSEETARPS--PYAQTPSSANHPPHTNTENQTAPEKTKP 496
P T P+ P TP P T E T P +TKP
Sbjct: 1093 PPRTTPEPTTEPPRTTPEPTTEPSRTKPEPTTEPSRTKP 1131
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 413 PYAQTPSSANHPPHTNTENQTAPEKTKP 496
P TP PP T E T P +T P
Sbjct: 728 PPRTTPEPTTEPPRTTPEPTTEPSRTTP 755
>SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 365 RSVAAAPPSEETARPSPYAQTPSSANHPPH 454
R A PP + P PY PS N PP+
Sbjct: 201 RQGGAQPPMGQNFAPPPYTAEPSKNNGPPY 230
>SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047)
Length = 983
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 335 R*RRLSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
R R L+ A R+ A P +E A P P A + PP T E+ T
Sbjct: 829 RRRELAAAFTRTPAGGPGAERAADPHPAADGGAPPTRPPLAATARTGTKERAPAT 883
>SB_16879| Best HMM Match : Stig1 (HMM E-Value=1)
Length = 232
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 365 RSVAAAPPSEETARPSPYAQTPSSANHPPH 454
R A PP + P PY PS N PP+
Sbjct: 201 RQGGAQPPMGQNFAPPPYTAEPSKNNGPPY 230
>SB_9870| Best HMM Match : GspM (HMM E-Value=1.9)
Length = 522
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 335 R*RRLSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
R R L+ A R+ A P +E A P P A + PP T E+ T
Sbjct: 285 RRRELAAAFTRTPAGGPGAERAADPHPAADGGAPPTRPPLAATARTGTKERAPAT 339
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 359 TLRSVAAAPPSEETARPSPYAQTPSSANHP---PHTNTENQTAPEKTKP 496
T + PP+ + P+ P + P PHT + T P TKP
Sbjct: 133 TTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKPHTTKP 181
>SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12)
Length = 124
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 204 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHP 317
L++L+P P+ ++ +K E+I YI L +E P
Sbjct: 70 LRELIPLPPQEKEPTKTEIIWMAAKYIALLSDMVEQEP 107
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 389 SEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKP 496
S+E +RPSP+A + P T + AP K+ P
Sbjct: 110 SQEQSRPSPFASQEHNQT-SPFARTMDDNAPSKSSP 144
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -2
Query: 217 TRSWSFERYICI-SAFSPSRC-RCTRPLAIA 131
TRSW+F+R++ I + P +C +C + A+A
Sbjct: 149 TRSWNFQRHVLIHTGQKPYKCQKCPKAFALA 179
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 350 SVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQ---TAPEKTKPT 499
++ T PS E P+++TP+S + T T N+ T P PT
Sbjct: 505 NITTSSEAPTTRPSSEKPTTRPFSETPTSTSSETPTKTFNKTPATRPSSETPT 557
>SB_19020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 365 RSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPE 484
+S AA P E SP +PS A+ PP +T+ + + E
Sbjct: 92 KSEAALSPRTEDENSSP-VNSPSEADSPPEQDTDEEPSSE 130
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKP 496
PP+ +A P P P + PP T T +T P
Sbjct: 106 PPATTSAPPPPTTTAPPATTSPPTTTDSPPTTAAETLP 143
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 368 SVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
+ +APP T P P++ + PP T E T P PT
Sbjct: 108 ATTSAPPPPTTTAPPATTSPPTTTDSPPTTAAE--TLPPTDAPT 149
>SB_51573| Best HMM Match : UCR_TM (HMM E-Value=6.7)
Length = 93
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 386 PSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT*Q 505
P +RP+P +PS A HPP + N +P+ Q
Sbjct: 7 PKPVASRPNP-VPSPSDAAHPPFASWRNSEEARTDRPSQQ 45
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 359 TLRSVAAAPPSEETARPSPYAQT---PSSANHPPHTNTENQTAPEKT 490
T + AAP +E A +P AQT P+ P HT QT + T
Sbjct: 616 TQSAPTAAPATEPQATVAPLAQTVTAPAQTEAPTHTAGPPQTTEQAT 662
>SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +3
Query: 159 HRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 311
H A++ L+ L+P + K+ K++++++ I+YI L + L +
Sbjct: 443 HERRRVAQLNGAYQDLRQLIPGYQCDTKLPKIKILRYAINYIAHLDNILSD 493
>SB_9457| Best HMM Match : PHD (HMM E-Value=3.3e-08)
Length = 344
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 365 RSVAAAPPSEETARPSPYAQTPSSANHPPHT 457
R+ AAA PS+ RP+P +T S A PP T
Sbjct: 244 RTFAAARPSQSFRRPAPSTETKSFA--PPTT 272
>SB_31077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 154 CTRPLAIAGTEAPVAHTAVIAFILS 80
CT + I P+ HT VI FI+S
Sbjct: 5 CTTTVIITTITTPITHTTVIIFIIS 29
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 371 VAAAPPSEETARPSPYAQTPSSANHPPHTNTE-NQTAPEKT 490
++ AP + +A P+P T S++ PP T + T+P+ T
Sbjct: 542 ISTAPQTTASAFPTPPQTTASASPTPPQTTASVSPTSPQTT 582
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 350 SVATLR-SVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPE 484
SV+T V PP ++ P +TPS PP TN E + PE
Sbjct: 245 SVSTASPQVIDTPPEAVSSSSQPPTETPS----PPQTNAEVSSTPE 286
>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1268
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 371 VAAAPPSEETARPSPYAQT-PSSANHPPHTNTENQTAPEKTK 493
++ A ++ P A PS N PP TE+ PEK K
Sbjct: 474 LSKASTDSQSGSEQPIASIEPSKQNTPPANKTESSPQPEKEK 515
>SB_32053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 365 RSVAAAPPSEETARPSPYAQTPSSANHPP 451
+ + A+PPS P P ++P+S PP
Sbjct: 308 KPIPASPPSTGKPSPPPLGESPASNTSPP 336
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 386 PSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKP 496
P ++ PSP PP T+T TAP + P
Sbjct: 275 PQTKSTSPSPQPTEAKPHTPPPPTSTPPTTAPRQPSP 311
>SB_24945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 356 ATLRSVAAAPPSEETARPSPYAQTPSSAN 442
A RS A P S A+P+P AQ P + +
Sbjct: 286 AAARSAAGLPSSPTLAQPAPRAQAPHAGD 314
>SB_11943| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 591
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 81 LKMKAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKN 236
L + T A S PA SG+ + D I++ +S +Q LV F P N
Sbjct: 385 LSPEKTTEGSANQYSYPAPMSGKPECLADDSKQHIRITMSDVQPLVAFWPGN 436
>SB_46206| Best HMM Match : HLH (HMM E-Value=5e-18)
Length = 400
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 195 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSAL 305
L L+ +P R+++KLE+++ +YI L L
Sbjct: 323 LDSLKKCIPVPQSKRRVTKLEILRIACNYIKSLSDTL 359
>SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 227 HEGYEILELREVHLYLSVFAIPV 159
H GY L EVHLY+ + PV
Sbjct: 644 HPGYTCTSLSEVHLYVIIQGTPV 666
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 386 PSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
PS+E + PSP PS + P + +Q +PE ++P+
Sbjct: 758 PSQEHSLPSPEHSQPSPEHSQP-SPEHSQPSPEHSQPS 794
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 362 LRSVAAAPPSEETARPSPYAQTPSSANHPP 451
+ S+ A PPS P+P + TP + PP
Sbjct: 350 IASLVANPPSTPAPTPAPLSSTPCAPFAPP 379
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,019,786
Number of Sequences: 59808
Number of extensions: 246071
Number of successful extensions: 1156
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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