Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b15
         (506 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    26   0.84 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.4  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   3.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   5.9  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   5.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   7.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   7.9  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.8 bits (54), Expect = 0.84
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 234 NRKISKLEVIQHVIDYICDLQSALENH 314
           N+K+SK++ ++  ++YI  LQ  L+ +
Sbjct: 144 NKKLSKVDTLRLAVEYIRSLQRMLDEN 170


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 371  VAAAPPSEETARPSPYAQTPSSANHPPHT-NTENQTA 478
            VAAAP  ++   P+P A + +      H+ N+ N T+
Sbjct: 932  VAAAPTQQQPLPPAPAAASSAGVQPTEHSVNSTNVTS 968


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 365 RSVAAAPPSEETARPSPYAQTPSSANHPPHTNTE 466
           R VAAA   +   RP   +   +  N PP T++E
Sbjct: 113 REVAAALDGKAKCRPRTPSMRVNCTNIPPDTSSE 146


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 407 PSPYAQTPSSANHPPHTNTENQTA 478
           PS Y Q       PP TN+++Q +
Sbjct: 631 PSAYQQQQPPVVPPPRTNSQSQAS 654


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 423 KHHPPQITLHTRTQKIKRHQKKQNQPDR 506
           ++ PPQ+      Q+ ++ QK + +PD+
Sbjct: 287 RYVPPQLRQQAHQQQQRQQQKVRPRPDK 314


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 251 IRSDSACYRLYLRPSISVGESPSCW 325
           +RSDS+    +  P IS+  S SC+
Sbjct: 169 VRSDSSLPMRHYVPHISLNSSSSCF 193


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = +2

Query: 347 LSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQT 475
           L ++   + +++  S  +++PSP  Q    +   PH++T   +
Sbjct: 2   LVISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSS 44


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = +2

Query: 347 LSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQT 475
           L ++   + +++  S  +++PSP  Q    +   PH++T   +
Sbjct: 2   LVISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSS 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,938
Number of Sequences: 2352
Number of extensions: 7378
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)