Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12b15
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51999-7|AAA96089.1| 89|Caenorhabditis elegans Helix loop heli... 34 0.052
U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome regu... 31 0.48
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 31 0.48
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 31 0.48
U10402-7|AAA19069.1| 192|Caenorhabditis elegans C. elegans neur... 31 0.63
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.5
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 1.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 1.9
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 29 1.9
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 29 1.9
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 3.4
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 28 3.4
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 28 3.4
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 28 3.4
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 28 3.4
AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical ... 28 4.5
Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical pr... 27 5.9
U64858-10|AAB18287.1| 138|Caenorhabditis elegans Hypothetical p... 27 5.9
U41624-1|AAF99942.2| 201|Caenorhabditis elegans Hypothetical pr... 27 5.9
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 27 5.9
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 27 5.9
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 5.9
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 27 5.9
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 5.9
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 5.9
Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical pr... 27 7.8
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 7.8
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 7.8
U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical pr... 27 7.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 7.8
AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin p... 27 7.8
>U51999-7|AAA96089.1| 89|Caenorhabditis elegans Helix loop helix
protein 15 protein.
Length = 89
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 189 MYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 308
M S+L+ L+P +P +K+SK+E+++ I YI L + L+
Sbjct: 50 MAFSQLRALLPTLPVEKKLSKIEILRFSIAYISFLDNLLQ 89
>U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform b
protein.
Length = 965
Score = 31.1 bits (67), Expect = 0.48
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 341 RRLSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEK-TKP 496
RR + A+ S AAAP S T+ +P A+ P ++ + APEK TKP
Sbjct: 831 RREAAASASSAAAAPSSSSTSGTAPAAEDEKMEVDQP-GKSKKEKAPEKDTKP 882
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.48
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 356 ATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
A + SVA P ARP+P P +A P Q AP T+P+
Sbjct: 275 APVASVAPVKPKPFVARPAPSFGKPRAAVAPARAPQITQRAPAATRPS 322
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 377 AAPPSEETARPSPYAQTPSSANHPPHTNTENQTAP 481
A PP P PYAQ+P +A PP Q AP
Sbjct: 62 AIPPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAP 96
>U10402-7|AAA19069.1| 192|Caenorhabditis elegans C. elegans neuro d
homolog protein1 protein.
Length = 192
Score = 30.7 bits (66), Expect = 0.63
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 138 ASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENH 314
A+GR + G N + M L++ +P +++K+SK+E ++ +YI LQ L+ +
Sbjct: 24 ANGRERARMHGLNNALDM----LREYIPITTQHQKLSKIETLRLARNYIDALQRMLQTN 78
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 350 SVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHT--NTENQTAPEKTKPT 499
S +TL S A P S T PS + PSS + P+T T +QT+ + P+
Sbjct: 366 SQSTLASSTATPGSSSTV-PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPS 416
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 350 SVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHT--NTENQTAPEKTKPT 499
S +TL S A P S T PS + PSS + P+T T +QT+ + P+
Sbjct: 573 SQSTLASSTATPGSSSTV-PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPS 623
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 350 SVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHT--NTENQTAPEKTKPT 499
S +TL S A P S T PS + PSS + P+T T +QT+ + P+
Sbjct: 573 SQSTLASSTATPGSSSTV-PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPS 623
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 356 ATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
+T + PP+ + YA T + N+ TNT T+P +P+
Sbjct: 475 STTPQIQETPPTPAQKKTYGYAPTAAPTNNSRGTNTWRSTSPSAVEPS 522
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 347 LSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPE 484
++ A +R VA+APP+ T P Y Q N H ++Q+ PE
Sbjct: 81 VATAQIRKVASAPPTTSTDPPLSYTQINCLEN--VHRLLKSQSRPE 124
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 347 LSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPE 484
++ A +R VA+APP+ T P Y Q N H ++Q+ PE
Sbjct: 381 VATAQIRKVASAPPTTSTDPPLSYTQINCLEN--VHRLLKSQSRPE 424
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 356 ATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKP 496
A + VA P ARP+P P +A P Q AP T+P
Sbjct: 271 APVAPVAPVKPKPFVARPAPNFGKPRAAVAPARAPQITQRAPAATRP 317
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +2
Query: 350 SVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAP 481
+ +T + P+ T P+ TP++ P T TE T P
Sbjct: 69 TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTP 112
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 350 SVATLRSVAAAPP---SEETARPSPYAQTPSSANHPPHTNTENQTAPEKTK 493
SV + + A PP S + PS ++ P A+ PP + ++ P K+K
Sbjct: 45 SVTSSNPINAPPPTATSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSK 95
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 350 SVATLRSVAAAPP---SEETARPSPYAQTPSSANHPPHTNTENQTAPEKTK 493
SV + + A PP S + PS ++ P A+ PP + ++ P K+K
Sbjct: 49 SVTSSNPINAPPPTATSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSK 99
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 350 SVATLRSVAAAPP---SEETARPSPYAQTPSSANHPPHTNTENQTAPEKTK 493
SV + + A PP S + PS ++ P A+ PP + ++ P K+K
Sbjct: 45 SVTSSNPINAPPPTATSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSK 95
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 350 SVATLRSVAAAPP---SEETARPSPYAQTPSSANHPPHTNTENQTAPEKTK 493
SV + + A PP S + PS ++ P A+ PP + ++ P K+K
Sbjct: 49 SVTSSNPINAPPPTATSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSK 99
>AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical
protein Y116A8C.11 protein.
Length = 281
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 243 ISKLEVIQHVID-YICDLQSALENHPAVGQFD 335
+S+LEV + +D + DLQS LE +P + +FD
Sbjct: 209 LSQLEVQKRKLDKQLIDLQSKLERNPELVEFD 240
>Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical
protein C34C6.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 398 TARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
T S Q+PS+ NH P N AP T T
Sbjct: 464 TVSTSTTRQSPSTINHVPEMTIRNTIAPTTTTST 497
>U64858-10|AAB18287.1| 138|Caenorhabditis elegans Hypothetical
protein C16D9.8 protein.
Length = 138
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 377 AAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTK 493
A PP + ARP+P P + H + Q AP + K
Sbjct: 96 APPPQFQAARPAPIQYHPMAYYHHAGQTGQPQVAPMRKK 134
>U41624-1|AAF99942.2| 201|Caenorhabditis elegans Hypothetical
protein F46C8.3 protein.
Length = 201
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 395 ETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
E SP + S N+ P+TN + +PE K T
Sbjct: 130 ECRNSSPEFKGNGSVNYKPYTNESTEMSPENEKKT 164
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 359 TLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTEN 469
+L+S A++ S E A+P P P S N P H + +N
Sbjct: 62 SLKSSASSTQSTE-AKPPPVQFPPPSKNPPKHVHQQN 97
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 311 SPSCWTI*R*RRLSVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKT 490
+P+ WT R+ V V PP+ +T P P QTP P T T + T +T
Sbjct: 344 TPTSWTRPTDGRVHVMPGIRVTETPPTIQT--PPPTTQTP------PTTQTSSTTQTPRT 395
Query: 491 KPT 499
K T
Sbjct: 396 KQT 398
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
PP+ ++A PS TP SA T P + PT
Sbjct: 334 PPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 372
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
PP+ ++A PS TP SA T P + PT
Sbjct: 284 PPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 322
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
PP+ ++A PS TP SA T P + PT
Sbjct: 334 PPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 372
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 383 PPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKPT 499
PP+ ++A PS TP SA T P + PT
Sbjct: 334 PPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 372
>Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical
protein T23G11.7b protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +2
Query: 350 SVATLRSVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEK 487
+V + S+ PP+ P Y+ TP+ +H P + + P++
Sbjct: 209 NVPSDHSLPPQPPARNNIPPPSYSSTPNLPSHTPFSAPPPRNQPQQ 254
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +2
Query: 374 AAAPPSEETARP---SPYAQTPSSANHPPHTNTENQTAPEK 487
A P +T RP SP +Q P P T+T Q PEK
Sbjct: 908 AVVPVIHQTTRPAVVSPNSQNPRYQVASPKTSTVIQATPEK 948
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +2
Query: 374 AAAPPSEETARP---SPYAQTPSSANHPPHTNTENQTAPEK 487
A P +T RP SP +Q P P T+T Q PEK
Sbjct: 949 AVVPVIHQTTRPAVVSPNSQNPRYQVASPKTSTVIQATPEK 989
>U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical
protein C04G6.4 protein.
Length = 418
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +2
Query: 368 SVAAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAPEKTKP 496
SV PP P+P+A P S + PH + T + P
Sbjct: 57 SVTPVPPPTFNPVPNPFAPRPKSVSPNPHPDVPAVTVGALSAP 99
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 374 AAAPPSEETARPSPYAQTPSSANHPPHTNTENQTAP 481
A AP +EET P + P +AN + TAP
Sbjct: 286 APAPTAEETPAPETVSAAPEAANSYDSAGGDAATAP 321
>AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin
protein 1 protein.
Length = 184
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 195 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSAL 305
L L+ ++P +P K++K+E ++ +YI L L
Sbjct: 82 LEHLRGILPALPDEPKMTKIETLRKAQEYIASLSFQL 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,055,095
Number of Sequences: 27780
Number of extensions: 176776
Number of successful extensions: 1000
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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