Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b14
         (498 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    24   0.77 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.4  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   9.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.4  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +2

Query: 140 KINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDS-EKIPYLIGEIFICQNLE 316
           +++K   L  ++     +L   Q D+ N  + ++ +   + +   I  LI    I  N++
Sbjct: 40  QVDKMKTLVEELKSKPGKLVPLQCDLSNQNDILKVIEWVEKNLGAIDILINNATI--NID 97

Query: 317 ITLKNLEEAKAKKIHEIHDLEEKC 388
           +TL+N E    KKI +I+ L   C
Sbjct: 98  VTLQNDEVLDWKKIFDINLLGLTC 121


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 251 LADDSEKIPYLIGEIFICQNLEITLKNLEEAKAKKIHEIHDLEEKC 388
           ++ D+    YL+  +F   +      NLE  + ++  E  DLEE C
Sbjct: 227 MSQDNHSKEYLVSIMFSHYDRNNN-GNLEREELEQFAENEDLEELC 271


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 304 TNKNFTNKVRDFF 266
           TN N TNK +D++
Sbjct: 137 TNNNNTNKYKDYY 149


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 131 DQQKINKFARLNAKVDDYKDEL 196
           DQQK N     N  V+D K +L
Sbjct: 40  DQQKANDVIEGNIDVEDKKVQL 61


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 331 IFQSNFQILTNKNFTNKVRDFFRIISKAQFL 239
           +   NFQ L    +  K R+FF  +    FL
Sbjct: 362 VLSDNFQQLLFSKYDAKKRNFFITMFDLDFL 392


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,907
Number of Sequences: 438
Number of extensions: 1505
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)