Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b12
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   1.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   5.6  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    22   7.4  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 163 CYLVVKLTKNGSAFPSKWSRWISRWYSRKFTAPTKIR 273
           CY    LT   S +    + + S WY R  +   K+R
Sbjct: 312 CYFGSDLTSEASCYSLTRAAYGSLWYRRSVSIQRKLR 348


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 22  PDILFLQTSFNYLCSSQFICLLTYKTI 102
           P ++FL   F Y+C   F   + Y  +
Sbjct: 560 PQMMFLVLLFAYMCFMMFFKWIMYSAV 586


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +1

Query: 169 LVVKLTKNGSAFPSKWSRWISRW 237
           ++  L    +  P+ ++ W+SRW
Sbjct: 180 IMANLRDEKNELPADFNEWLSRW 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,948
Number of Sequences: 2352
Number of extensions: 4249
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)