Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b12
         (404 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1809|AAF50163.2|  404|Drosophila melanogaster CG14156-P...    29   3.1  
AY095018-1|AAM11346.1|  121|Drosophila melanogaster GM06363p pro...    28   5.4  
AE014134-2751|AAN10956.2|  826|Drosophila melanogaster CG31782-P...    28   5.4  
AE014134-2750|AAN10955.1|  656|Drosophila melanogaster CG31782-P...    28   5.4  
BT001386-1|AAN71141.1|  145|Drosophila melanogaster GH04494p pro...    27   7.2  
AE014296-838|AAN11600.1|  145|Drosophila melanogaster CG32240-PA...    27   7.2  

>AE014296-1809|AAF50163.2|  404|Drosophila melanogaster CG14156-PA
           protein.
          Length = 404

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
 Frame = +1

Query: 10  CDAAPDILFLQTSFNYLCSSQFICLLTYK----TIRIINIFTNFYMNQCMS*DCKCY--- 168
           C+   D+       N+L +S  IC + ++    T+ +I I+  F M   +     CY   
Sbjct: 269 CEHVNDLYSFSLLLNFLMASMQICFIAFQVTESTVEVIIIYCIFLMTSMVQVFMVCYYGD 328

Query: 169 --LVVKLTKNGSAFPSKW 216
             +   L    +A+  KW
Sbjct: 329 TLIAASLKVGDAAYNQKW 346


>AY095018-1|AAM11346.1|  121|Drosophila melanogaster GM06363p
           protein.
          Length = 121

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 147 HTL-IHIKIREDIDYSYCFICKKTDK 73
           H+L +H +I   ++   CFICKKT K
Sbjct: 75  HSLQVHARIHTGVEPYKCFICKKTFK 100


>AE014134-2751|AAN10956.2|  826|Drosophila melanogaster CG31782-PB,
           isoform B protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 147 HTL-IHIKIREDIDYSYCFICKKTDK 73
           H+L +H +I   ++   CFICKKT K
Sbjct: 653 HSLQVHARIHTGVEPYKCFICKKTFK 678


>AE014134-2750|AAN10955.1|  656|Drosophila melanogaster CG31782-PA,
           isoform A protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 147 HTL-IHIKIREDIDYSYCFICKKTDK 73
           H+L +H +I   ++   CFICKKT K
Sbjct: 483 HSLQVHARIHTGVEPYKCFICKKTFK 508


>BT001386-1|AAN71141.1|  145|Drosophila melanogaster GH04494p
           protein.
          Length = 145

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 7/25 (28%), Positives = 19/25 (76%)
 Frame = -3

Query: 108 YSYCFICKKTDKLRRTQIVKRCLKK 34
           ++YC  C++T+ +RR ++++R  ++
Sbjct: 56  FAYCERCRRTESVRRRRVIQRAQER 80


>AE014296-838|AAN11600.1|  145|Drosophila melanogaster CG32240-PA
           protein.
          Length = 145

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 7/25 (28%), Positives = 19/25 (76%)
 Frame = -3

Query: 108 YSYCFICKKTDKLRRTQIVKRCLKK 34
           ++YC  C++T+ +RR ++++R  ++
Sbjct: 56  FAYCERCRRTESVRRRRVIQRAQER 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,634,014
Number of Sequences: 53049
Number of extensions: 183824
Number of successful extensions: 520
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)