Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12b11
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT) iden... 83 9e-17
At1g65480.1 68414.m07429 flowering locus T protein (FT) identica... 80 9e-16
At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT) id... 78 5e-15
At2g27550.1 68415.m03338 centroradialis protein, putative (CEN) ... 75 3e-14
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 73 1e-13
At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identi... 71 5e-13
At3g19650.1 68416.m02490 cyclin-related contains weak similarity... 33 0.13
At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containi... 28 5.0
At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containi... 28 5.0
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 27 6.6
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 27 6.6
At4g31210.1 68417.m04432 DNA topoisomerase family protein simila... 27 6.6
At4g25170.1 68417.m03624 expressed protein 27 6.6
At4g04470.1 68417.m00649 peroxisomal membrane protein 22 kDa (PM... 27 6.6
At5g19420.1 68418.m02314 zinc finger protein, putative / regulat... 27 8.7
At5g12350.1 68418.m01453 zinc finger protein, putative / regulat... 27 8.7
At5g10530.1 68418.m01219 lectin protein kinase, putative similar... 27 8.7
At4g12750.1 68417.m02002 expressed protein 27 8.7
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P... 27 8.7
At1g64920.1 68414.m07359 glycosyltransferase family protein cont... 27 8.7
>At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT)
identical to SP|Q9XFK7 MOTHER of FT and TF1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 173
Score = 83.4 bits (197), Expect = 9e-17
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Frame = +2
Query: 125 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDP 301
+V+ DV+ P A + V Y + G E+ P+ + P V + YTL MTDP
Sbjct: 12 RVIGDVLDMFIPTANMSV-YFGPKHITNGCEIKPSTAVNPPKVNISGHSDELYTLVMTDP 70
Query: 302 DAPSRKEPTFREWHHWLVGNIQ-GNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSK 478
DAPS EP REW HW+V +I G + G+ + Y+ PP G+HRY+ +L++Q S
Sbjct: 71 DAPSPSEPNMREWVHWIVVDIPGGTNPSRGKEILPYMEPRPP--VGIHRYILVLFRQNSP 128
Query: 479 LTFDEPRLTNTSSDKRANFKIAEFAKKYN 565
+ L RANF FA ++
Sbjct: 129 V-----GLMVQQPPSRANFSTRMFAGHFD 152
>At1g65480.1 68414.m07429 flowering locus T protein (FT) identical
to SP|Q9SXZ2 FLOWERING LOCUS T protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 80.2 bits (189), Expect = 9e-16
Identities = 56/151 (37%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Frame = +2
Query: 122 SQVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEP-GQYYTLAMT 295
S+VV DV+ P + L+V Y EV G +L P+QV+++P V+ E +YTL M
Sbjct: 12 SRVVGDVLDPFNRSITLKVTYGQR-EVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMV 70
Query: 296 DPDAPSRKEPTFREWHHWLVGNIQGNE-VNSGETLSQYVGSGPPEKTGLHRYVFLLYKQP 472
DPD PS P RE+ HWLV +I G + Y P G+HR VF+L++Q
Sbjct: 71 DPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCY--ENPSPTAGIHRVVFILFRQL 128
Query: 473 SKLTFDEPRLTNTSSDKRANFKIAEFAKKYN 565
+ T P R NF EFA+ YN
Sbjct: 129 GRQTVYAP-------GWRQNFNTREFAEIYN 152
>At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT)
identical to SP|Q9FIT4 BROTHER of FT and TFL1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Frame = +2
Query: 92 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEP 268
MS + +V+ DV+ P+ ++V + S V G+EL P+ + +P V+ +
Sbjct: 1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60
Query: 269 -GQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLH 442
++TL M DPDAPS P RE+ HW+V +I G + + G + +Y P G+H
Sbjct: 61 LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRY--ETPKPVAGIH 118
Query: 443 RYVFLLYKQ 469
RYVF L+KQ
Sbjct: 119 RYVFALFKQ 127
>At2g27550.1 68415.m03338 centroradialis protein, putative (CEN)
strong similarity to SP|Q41261 CENTRORADIALIS protein
{Antirrhinum majus}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 75.4 bits (177), Expect = 3e-14
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Frame = +2
Query: 125 QVVPDVIPKAPAAL-LQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEPGQYYTLAMTD 298
+V+ DV+ A+ + V Y S +V G+EL P+ V +P V+ + ++TL MTD
Sbjct: 13 RVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTD 72
Query: 299 PDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQ 469
PD P +P RE HW+V +I G +V+ G+ + Y P G+HR+V+LL+KQ
Sbjct: 73 PDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGY--EMPRPNIGIHRFVYLLFKQ 128
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 72.9 bits (171), Expect = 1e-13
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Frame = +2
Query: 128 VVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTDP 301
VV DV+ P L+V Y EV G +L P+QV ++P V+ + + +YTL M DP
Sbjct: 14 VVGDVLDPFTRLVSLKVTYGHR-EVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTLVMVDP 72
Query: 302 DAPSRKEPTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGPPEKTGLHRYVFLLYKQPSK 478
D PS P RE+ HWLV +I N+ G + Y PP +G+HR V +L++Q +
Sbjct: 73 DVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPP--SGIHRIVLVLFRQLGR 130
Query: 479 LTFDEPRLTNTSSDKRANFKIAEFAKKYN 565
T P R F EFA+ YN
Sbjct: 131 QTVYAP-------GWRQQFNTREFAEIYN 152
>At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identical
go SP|P93003 TERMINAL FLOWER 1 protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 70.9 bits (166), Expect = 5e-13
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Frame = +2
Query: 125 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEPGQYYTLAMTD 298
+VV DV+ P + V Y + +V G+EL P+ V +P V+ + ++TL M D
Sbjct: 16 RVVGDVLDFFTPTTKMNVSY-NKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMID 74
Query: 299 PDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPS 475
PD P +P +E HW+V NI G + G+ + Y P G+HR+VF+L++Q
Sbjct: 75 PDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSY--ELPRPSIGIHRFVFVLFRQKQ 132
Query: 476 KLTFDEPRLTNTSSDKRANFKIAEFAKKYN 565
+ R+ + R +F +FA +Y+
Sbjct: 133 R------RVIFPNIPSRDHFNTRKFAVEYD 156
>At3g19650.1 68416.m02490 cyclin-related contains weak similarity to
Cylicin I (Multiple-band polypeptide I)
(Swiss-Prot:P35662) [Bos taurus]
Length = 302
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 280 HSGHDRP*CAVP*RTHISRMAPLAGWQHPGQR--GKLRRNFVPVRGLWTSGKDR 435
HSGH A P + + R P + QH +R GK+ R VRG W S +D+
Sbjct: 81 HSGHHETTKAAPHLSQVPRSRPYS--QHDDRRSDGKVDRRPTSVRGSWRSSRDQ 132
>At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 434
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 296 DPDAPSRKEPTFREWHHWLVGNIQGNEVN 382
DP +P E + ++W WL+ + + EV+
Sbjct: 109 DPSSPHVPEESVKKWKTWLLSDAEAREVD 137
>At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 434
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 296 DPDAPSRKEPTFREWHHWLVGNIQGNEVN 382
DP +P E + ++W WL+ + + EV+
Sbjct: 109 DPSSPHVPEESVKKWKTWLLSDAEAREVD 137
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 396 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS-RDSLTLRATN 524
C W +DL + + C ++ +N H S S RD + L N
Sbjct: 290 CVGVWVVDLSRTEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNN 333
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 396 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS-RDSLTLRATN 524
C W +DL + + C ++ +N H S S RD + L N
Sbjct: 290 CVGVWVVDLSRTEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNN 333
>At4g31210.1 68417.m04432 DNA topoisomerase family protein similar
to DNA Topoisomerase I (SP:Q9X3X7) {Zymomonas mobilis}
Length = 1280
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 375 SLPWMLPTSQWCHSRNVGSLRDGASGSVMA 286
S+ W +P+S W H +++ +GA ++A
Sbjct: 520 SMVWEVPSSAWTHIKSIKVALNGAENLILA 549
>At4g25170.1 68417.m03624 expressed protein
Length = 344
Score = 27.5 bits (58), Expect = 6.6
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Frame = -1
Query: 477 FDGCLYK---RNTYLCRPVFSGG---PEPTYWDKVSPEFTS-LPWMLPTSQWCHSRNV 325
FD Y R+ Y C P GG P T P F S WM P+ CHSR +
Sbjct: 139 FDASSYSQLVRDKYECYPENGGGNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSRTL 196
>At4g04470.1 68417.m00649 peroxisomal membrane protein 22 kDa
(PMP22) identical to peroxisomal membrane protein
[Arabidopsis thaliana] gi|3980254|emb|CAA06834
Length = 190
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 407 VGSGPPEKTGLHRYVFLLYKQP 472
+GS PP+KT L RY+ L + P
Sbjct: 1 MGSSPPKKTTLQRYLSQLQQHP 22
>At5g19420.1 68418.m02314 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1124
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 480 SHSTSRDSLTLRATNVPISKLPSSPRSTT 566
S S + RAT+ PIS+ PS PRSTT
Sbjct: 841 SASVPGSRIASRATS-PISRRPSPPRSTT 868
>At5g12350.1 68418.m01453 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1062
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 480 SHSTSRDSLTLRATNVPISKLPSSPRSTT 566
S S + RAT+ PIS+ PS PRSTT
Sbjct: 805 SASVPGSRIVSRATS-PISRRPSPPRSTT 832
>At5g10530.1 68418.m01219 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 651
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 389 RRSLPRCPGCCQPASGAIREMWVLYG 312
R+S+ R G +P + + +MW LYG
Sbjct: 532 RKSVDRRQGRVEPVTNLVEKMWDLYG 557
>At4g12750.1 68417.m02002 expressed protein
Length = 1108
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 107 KSFEASQVVPDVIPKAPAALLQVKYPSGV 193
+S ++S + PD++PK P +Q++ P G+
Sbjct: 304 RSSDSSLLFPDLLPKFPPNSVQMRMPFGL 332
>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1314
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 410 PRTGTKFRRSLPRCPGCCQPASGAIREMWVLYG 312
P+ F L CCQ + + EMW+++G
Sbjct: 110 PKNKASFNAKLVLGLICCQLVTKKVNEMWIVFG 142
>At1g64920.1 68414.m07359 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 452
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 308 PSRKEPTFREWHHWLVGNIQGNEV 379
P + +P +W HWL G QG+ V
Sbjct: 231 PDKSKPLEDQWSHWLSGFGQGSVV 254
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,361,293
Number of Sequences: 28952
Number of extensions: 304906
Number of successful extensions: 904
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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