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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b10
         (694 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary...   358   8e-98
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi...   322   5e-87
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;...   263   2e-69
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr...   245   7e-64
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n...   221   2e-56
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ...   146   4e-34
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc...   107   3e-22
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop...   107   3e-22
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m...   106   4e-22
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m...   103   3e-21
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo...   102   1e-20
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop...    98   2e-19
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc...    97   5e-19
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi...    93   4e-18
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar...    93   4e-18
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ...    90   5e-17
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc...    90   5e-17
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N...    85   1e-15
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc...    82   1e-14
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ...    81   2e-14
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc...    77   4e-13
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha...    72   2e-11
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella...    69   1e-10
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop...    64   3e-09
UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN full-le...    40   0.058
UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ...    37   0.54 
UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742...    36   1.2  
UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2; Clost...    35   2.2  
UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to ENSANGP000...    34   3.8  
UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; ...    33   5.0  
UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsi...    33   6.6  
UniRef50_Q5C2N1 Cluster: SJCHGC03405 protein; n=1; Schistosoma j...    33   8.8  

>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
           Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
           (Human)
          Length = 403

 Score =  358 bits (880), Expect = 8e-98
 Identities = 157/222 (70%), Positives = 186/222 (83%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 387
           DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR   TV+AEH+S++C+RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 388 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 567
           NW+             WQDE G+K +EKDF  M +YC V+RVIAHTQM+LL  RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 568 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           MEIQ+NGGT+ +K+ WARE LE+ +PV+ VF QDEMID IGV
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGV 222


>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
           Bilateria|Rep: 60S ribosomal protein L3-like - Homo
           sapiens (Human)
          Length = 407

 Score =  322 bits (791), Expect = 5e-87
 Identities = 144/222 (64%), Positives = 175/222 (78%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           MSHRKFSAPRHG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE 
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 387
            RPG KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+  T++AEH+S++CRRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 388 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 567
           +W+             W+D  G+K ++KDF  M +YC V+RVI HTQMKLL  RQKKAHI
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 568 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           MEIQLNGGT+ +KV WA+  LEK +PV SVF+Q E+ID I V
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAV 222


>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein rpl-3 - Caenorhabditis elegans
          Length = 353

 Score =  263 bits (645), Expect = 2e-69
 Identities = 115/168 (68%), Positives = 135/168 (80%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 387
           D+PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 388 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 531
           NW              WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168


>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
           Trypanosomatidae|Rep: Ribosomal protein L3, putative -
           Trypanosoma brucei
          Length = 480

 Score =  245 bits (600), Expect = 7e-64
 Identities = 115/227 (50%), Positives = 154/227 (67%), Gaps = 3/227 (1%)
 Frame = +1

Query: 22  SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 201
           ++MSH KF  PRHG +GF P+KRSR+ RG+ ++FPKDDPS+  HLT+F+ YKAGMTH+VR
Sbjct: 50  TNMSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVR 109

Query: 202 EPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF 381
           + DRPGSK+NKKE+VE VTI+E PPMV VG+VGY +TP G + + TVWA H S + RRRF
Sbjct: 110 DVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRF 169

Query: 382 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ--- 552
           YKNW               +   GR +  +  K   +   ++RV+AHTQ++ L+  +   
Sbjct: 170 YKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGV 229

Query: 553 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           KKAH+ EIQ+NGGTI  K++ A+  LEK + +DSVF Q E  D   V
Sbjct: 230 KKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAV 276


>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
           Rattus norvegicus
          Length = 380

 Score =  221 bits (539), Expect = 2e-56
 Identities = 102/187 (54%), Positives = 133/187 (71%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           MS+R FSAPRHGS+GF P+K S  H GKVK FPKDD SKPVHLT F+ +KA MTH++++ 
Sbjct: 1   MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 387
           DRP SK+NKKE+VE V I+ETPPMV +G+VGYIE P GL     V+AEH+S   ++ FYK
Sbjct: 61  DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYK 120

Query: 388 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 567
           NW+                ++G++ +E +FK M +YC V+ ++AHTQM LL   QKKAH+
Sbjct: 121 NWHSEKKASTKYF------DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHL 174

Query: 568 MEIQLNG 588
           MEIQ+ G
Sbjct: 175 MEIQVMG 181


>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
           RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
           60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
           B) (TARBP-B). - Bos Taurus
          Length = 340

 Score =  146 bits (354), Expect = 4e-34
 Identities = 84/192 (43%), Positives = 115/192 (59%)
 Frame = +1

Query: 85  KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTII 264
           K S +H+GKV  FPKD  SKPV+L+AF+GY+AGMTHVVR+ DRPGSK++KKE+VE VTI+
Sbjct: 1   KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60

Query: 265 ETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQD 444
           ET P + VG VG  ET  GL+   +V+A+H+S +C+R   K  Y             W+ 
Sbjct: 61  ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR- 117

Query: 445 ELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 624
             G  ++                   TQM LL   QKKAH+ E Q+N G +  K+ WA +
Sbjct: 118 --GTSAL-------------------TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHK 155

Query: 625 HLEKPIPVDSVF 660
            LE+ +PV+ +F
Sbjct: 156 KLEQQVPVNHIF 167


>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Methanococcus jannaschii
          Length = 335

 Score =  107 bits (257), Expect = 3e-22
 Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 2/216 (0%)
 Frame = +1

Query: 52  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 231
           PR GS+ F P+KR++R   +++++P++D    V L AF  YKAGM+H   + D P S   
Sbjct: 8   PRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKSPNA 64

Query: 232 KKEIVEAVTIIETPPM-VC-VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXX 405
            +E+   +TI+E PP+ VC + V G  E  + L  L  VWA+++ ++  R+         
Sbjct: 65  GQEVFTPITILEAPPINVCAIRVYGRNERNY-LTTLTEVWADNLDKELERKI-------- 115

Query: 406 XXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLN 585
                        +  RK++E D + +      VRV+ HT  KL    +KK  I+EI++ 
Sbjct: 116 ---------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIG 165

Query: 586 GGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           G  IE+++ +A+E L K + +  VF + E++D IGV
Sbjct: 166 GKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGV 201


>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
           Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
           pernix
          Length = 344

 Score =  107 bits (256), Expect = 3e-22
 Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 4/226 (1%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           M  RK  APR GS+GF P+KR+ R   +VK +P+ D  KPV L AF+GY+AGMTHV    
Sbjct: 1   MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPH-GLRALLTVWAEHMSE-DCRRRF 381
           DRPG   + KEI   VTI+ETPPM    V  Y   P+ G  +L   WA+   E + +RR 
Sbjct: 60  DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI 119

Query: 382 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLL-KQRQKK 558
                             +  +   KS+E+   K       VR+IA +Q KL     +KK
Sbjct: 120 -------------STLGSFDTDKMLKSLEERLDK----AEDVRLIAASQPKLAGGLSKKK 162

Query: 559 AHIMEIQLNGGTIEDKV-KWAREHLEKPIPVDSVFAQDEMIDCIGV 693
             ++EI++ G +   K+  +A++ L   I V+ VF + +++D I V
Sbjct: 163 PDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAV 208


>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
           marine group II euryarchaeote DeepAnt-JyKC7|Rep:
           Ribosomal protein L3 - uncultured marine group II
           euryarchaeote DeepAnt-JyKC7
          Length = 358

 Score =  106 bits (255), Expect = 4e-22
 Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
 Frame = +1

Query: 52  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 231
           P+ GSMGF P+KR+ R  G++ ++P+ + S+ + +  F G+KAGMTHV+     P S   
Sbjct: 7   PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65

Query: 232 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMS--EDCRRRFYKNWYXXX 405
            +EI +AVT++E PPM  + V GY  TP+G++    +WA+  S  +    RF        
Sbjct: 66  GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125

Query: 406 XXXXXXXXXXWQDELGRK--SIEKDFKKMIRYCSV--VRVIAHTQMKLLKQRQKKAH-IM 570
                         +  +   +  D    +   ++  VR+I  TQ  L+K    K   IM
Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185

Query: 571 EIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           E+ L GG    K++WA E L   I +D V+   + +D +G+
Sbjct: 186 EVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGI 226


>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
           marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
           protein L3 - uncultured marine group II euryarchaeote
           HF70_59C08
          Length = 338

 Score =  103 bits (248), Expect = 3e-21
 Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
 Frame = +1

Query: 52  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 231
           P+ GSMGF P+KR+ R  G+VK++P+ D S  V +  F G+KAGMTHV+     PGS   
Sbjct: 7   PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65

Query: 232 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 411
             E+ +AVT++E PPM  + V GY  TP+G +     WA   S D       +       
Sbjct: 66  GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA---SADKLSDVIPSLPRRIPE 122

Query: 412 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM-KLLKQRQKKAHIMEIQLNG 588
                     D+L    + +           VR+I  +Q  K+     K   IME+ L G
Sbjct: 123 RKEHDANAHLDKLRESDLAE-----------VRLIVSSQPDKVSAVGSKSPEIMEMGLTG 171

Query: 589 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           G +  ++ WA E L + + ++ VF     ID IGV
Sbjct: 172 GDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGV 206


>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
           Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
           - Staphylothermus marinus (strain ATCC 43588 / DSM 3639
           / F1)
          Length = 395

 Score =  102 bits (244), Expect = 1e-20
 Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 41/263 (15%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFP------------------KDDPSKPVH 153
           M HRK+SAPRHGS+G  P+KR+ +   +++++P                  K    KPV 
Sbjct: 1   MGHRKYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV- 59

Query: 154 LTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGY-IETPHGLRA 330
           L  ++ YKAGM+H +   DRP +  + KEI   VT+++ PP++ +G+ GY I   HGL +
Sbjct: 60  LLGYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLS 119

Query: 331 LLTVW---AEHMSEDCRRRFYKNWYXXXXXXXXXXXXXW--------------QDELGRK 459
              VW    E + E   + +  N +                              E G K
Sbjct: 120 FGEVWRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFK 179

Query: 460 SIEKDFKKMIRYCSV-----VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 624
            +E ++K+ +          +RVIA T   L    +KK  I+EI++ GGT+ +++ +A +
Sbjct: 180 FLENNWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEK 239

Query: 625 HLEKPIPVDSVFAQDEMIDCIGV 693
            L   + VD VF + + ID IGV
Sbjct: 240 LLGNYVTVDQVFREGQFIDIIGV 262


>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
           Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
           solfataricus
          Length = 351

 Score = 98.3 bits (234), Expect = 2e-19
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 5/227 (2%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           M HRK ++PR GS G  P+KRS       + +P+ +   P  L  F+GYK GMTHV    
Sbjct: 1   MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLT-VWAEHMSE--DCRRR 378
           D P S  N KEI   VT++E PP++ + +  Y     G   ++T  W+    +  D  RR
Sbjct: 60  DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119

Query: 379 FYK-NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQK 555
            +  + +             +  +L    I+ +  +++ +    R++  TQ + +    K
Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKL--DLIKSNLDRIVYF----RLLVSTQPRKIPSLGK 173

Query: 556 KA-HIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           KA  ++EIQ+ GG  + ++ +A   L K I +  VF + ++ID +GV
Sbjct: 174 KAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGV 220


>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
           Thermococcaceae|Rep: 50S ribosomal protein L3P -
           Pyrococcus furiosus
          Length = 365

 Score = 96.7 bits (230), Expect = 5e-19
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 10/228 (4%)
 Frame = +1

Query: 40  KFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 219
           K   PR GS+GF P+KR++    +++++PK+     V +  F GYKAGMTH++   D PG
Sbjct: 3   KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 220 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED---CRRRFYK- 387
              N KEI   VTIIETPP+   G+  Y     GL     V       D    + R  K 
Sbjct: 60  -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118

Query: 388 ----NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQR 549
                +Y             +  E+  + + +  + MI+   +  VR I  TQ  ++K +
Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLGQ-LEDMIKEGEIVDVRAIVATQPWVIKLK 177

Query: 550 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
            KK  +ME  + G ++E+K  + +E L K + V  V  + E++D I V
Sbjct: 178 -KKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAV 224


>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
           pendens Hrk 5|Rep: 50S ribosomal protein L3 -
           Thermofilum pendens (strain Hrk 5)
          Length = 334

 Score = 93.5 bits (222), Expect = 4e-18
 Identities = 67/214 (31%), Positives = 102/214 (47%)
 Frame = +1

Query: 52  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 231
           PR GS  +YP+KR+R    +V+ +P++          F GYK GM HV+       S   
Sbjct: 7   PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62

Query: 232 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 411
            +E   A T+IE PP+  V V  Y +TP+G + L  VWA+ + +D  R F          
Sbjct: 63  GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112

Query: 412 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 591
                    +D+   +   K  +++    S VRV+A TQ +L    +KK  ++EI + GG
Sbjct: 113 ------PLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIAV-GG 165

Query: 592 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
             E  +  A E L K + +  VF + + ID I V
Sbjct: 166 PPEKALSLALEKLGKDLTISDVFKEGDYIDVIAV 199


>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Methanopyrus kandleri
          Length = 361

 Score = 93.5 bits (222), Expect = 4e-18
 Identities = 63/210 (30%), Positives = 99/210 (47%)
 Frame = +1

Query: 52  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 231
           PR GS+ F P+KR+ R   +++++P ++    V +  F GYKAGMTH +   D P S   
Sbjct: 12  PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTE 68

Query: 232 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 411
            +EI   VTI++ PPM    +  Y  TP G R +   WAE   E    R +         
Sbjct: 69  GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF-----TVPK 123

Query: 412 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 591
                     +EL  + I ++          +RVI  TQ K     +KK  +ME ++ G 
Sbjct: 124 DGEAGDLDKIEELVDEGIVEE----------IRVIVATQPKKAGVPKKKPDVMEYRIGGK 173

Query: 592 TIEDKVKWAREHLEKPIPVDSVFAQDEMID 681
            + ++ ++A E L + I    VF + E++D
Sbjct: 174 DVRERFEYAVEILSEEIRAKDVFDEGEIVD 203


>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
           Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
           L3P - Ignicoccus hospitalis KIN4/I
          Length = 358

 Score = 89.8 bits (213), Expect = 5e-17
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           M  RK  APR GS G  P+KR+     +V+++P  D  KP+   AF+GYK GMTHV+   
Sbjct: 1   MGARKKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMID 57

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVG--VVGYIETPHGLRALLTVW-------AEHMS 360
           DR       +EI   VT+IETPPMV +G  V GY +   G  AL  VW        E + 
Sbjct: 58  DREHVDTAGQEIFVPVTVIETPPMVVLGARVYGY-DPNRGRYALTEVWRNPSDTIKEKLG 116

Query: 361 EDCRRRFY--KNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMK 534
           E+  R++    +               ++ ++  K ++ D +K++    ++  I      
Sbjct: 117 EEVLRKYLLGMSKRLPHMVEELGPGKGFEFKVPEKELDVDPEKVVGVGLIMSSIPFLAGG 176

Query: 535 LLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           + K   K   I+E+++ G  +E  +++A+  L + + V+ V    + +D IGV
Sbjct: 177 VSK---KAPDILEVKVGGSPVE-ALEYAKGKLGQLVDVEEVIEAGKFVDVIGV 225


>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 335

 Score = 89.8 bits (213), Expect = 5e-17
 Identities = 71/217 (32%), Positives = 99/217 (45%), Gaps = 3/217 (1%)
 Frame = +1

Query: 52  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 231
           PR GSMGF P+KR+     +  ++P DD    V L  F GYKAGMTHVV   D+  +   
Sbjct: 7   PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64

Query: 232 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 411
             E    VT++ETPPM    V  Y +TP+G + L  VWA+   E   R            
Sbjct: 65  GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL---------- 114

Query: 412 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHT-QMKLLKQRQKKAHIMEIQLNG 588
                     DEL    IE    + I   + +RVI HT         +K   +ME ++ G
Sbjct: 115 -SVPDEGGDTDEL----IEALDTEEI---ADIRVITHTVPGDTAGVPKKNPDVMETRVGG 166

Query: 589 GTIEDKVKWAREHLEK--PIPVDSVFAQDEMIDCIGV 693
           GT+ D++++A + +E         VF   E  D  G+
Sbjct: 167 GTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGI 203


>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
           - Candidatus Nitrosopumilus maritimus SCM1
          Length = 331

 Score = 85.4 bits (202), Expect = 1e-15
 Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           M  RK  +PR GS+ + P+ R++    +++A+PK D  +P  + A  G+KAG   +V   
Sbjct: 1   MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF-Y 384
           DR       K++V   T++ TPP++ +G+ GY +   GL A   V+AE + +   +    
Sbjct: 60  DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISL 119

Query: 385 KNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 564
           KN                + E    + EK  KK+    ++V  I+ +   L    QKK +
Sbjct: 120 KN----------------KQENALDNAEKSLKKIKEIFAIV-AISPSAAGL---EQKKPY 159

Query: 565 IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           I E  ++GG I  +    +E L K I +D +F     +D   +
Sbjct: 160 IFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAI 202


>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Uncultured methanogenic archaeon RC-I
          Length = 337

 Score = 82.2 bits (194), Expect = 1e-14
 Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
 Frame = +1

Query: 49  APRHGSMGFYPKKRSRRHRGKVKAFPK--DDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 222
           APR GS+G+ P+ R+R  + K++ + +  D P     +  F+G+KAGM+H+V   DRP S
Sbjct: 6   APRRGSLGYSPRVRARSQKPKMRNWAELGDQPK----IQGFVGFKAGMSHIVMVDDRPHS 61

Query: 223 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE-DCRRRFYKNWYX 399
                EI   VTI+E P M   G+  Y ++P+G + +   W   +   +      KN Y 
Sbjct: 62  ATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLKMLESLTHLPKNGYK 121

Query: 400 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 579
                         DE   K  E   K ++    V+ V   +++  +   +K   +ME +
Sbjct: 122 -------------TDEQLAKIAELVKKGVVADLRVMTVTLTSEVSGIP--KKVPELMENR 166

Query: 580 LNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMID 681
           + GG +  + ++A+  + K + +  VFA  E++D
Sbjct: 167 IAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVD 200


>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 173

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 47/121 (38%), Positives = 64/121 (52%)
 Frame = -2

Query: 693 DTNAVNHFILGKHRIDRDRFLQMFSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXSVGN 514
           D+N +NHFIL ++R++R+ F ++F GP +FV DGTTV LDF  V             V  
Sbjct: 55  DSNDINHFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVSQ 114

Query: 513 DSYNTTVADHLLEIFFY*FASKLILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPDSQ 334
           DS N +V     +  F  F    +  F   F E  LL F+PV VE++S  F  +  PDS 
Sbjct: 115 DSDNRSVLLDSGQFSFNLFGVSGV--FTRVFGEGFLLGFIPVLVESSSDFFTQVFSPDSG 172

Query: 333 Q 331
           Q
Sbjct: 173 Q 173


>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
           Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
           Nanoarchaeum equitans
          Length = 321

 Score = 77.0 bits (181), Expect = 4e-13
 Identities = 55/215 (25%), Positives = 102/215 (47%)
 Frame = +1

Query: 49  APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKI 228
           APR GSMGF+P+KR+ R   ++K +PK +  KP+   AF  YK GMTH +         I
Sbjct: 8   APRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTI-------LNI 57

Query: 229 NKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXX 408
           N + +   VT++E P ++ +G   Y +    L+ + +++   + +   R+  K       
Sbjct: 58  NGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK------- 110

Query: 409 XXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNG 588
                    ++++      ++ F         V++I  TQ   +K + K   I +I + G
Sbjct: 111 ----LKNYNFEEK------KEQFLSKADNADEVKIIVSTQPWKIKLK-KTPEIFDIPIGG 159

Query: 589 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
             +  K+++A   L K + ++ VF + + +D I V
Sbjct: 160 SDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAV 194


>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
           symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
           symbiosum
          Length = 328

 Score = 71.7 bits (168), Expect = 2e-11
 Identities = 37/113 (32%), Positives = 62/113 (54%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           M HRKFS PR GS+ + P+ R+R    +++ +P+    +P  L A  G+KAG   +V   
Sbjct: 1   MGHRKFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSID 58

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED 366
           DR  +    K++V   T++ TPP+  +G+ GY +  +G      V+AE +  +
Sbjct: 59  DREHTPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPRE 111


>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
           natans|Rep: Ribosomal protein L3 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 370

 Score = 68.5 bits (160), Expect = 1e-10
 Identities = 39/105 (37%), Positives = 56/105 (53%)
 Frame = +1

Query: 28  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 207
           MSHRKF  PR GS+GF PKKRS R     K + +       +++ F   K   THV+R  
Sbjct: 1   MSHRKFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRIC 60

Query: 208 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTV 342
           +   SK  +  I++ VT++E PP+  VG+  Y  +   L  L T+
Sbjct: 61  NIVSSKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI 105



 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/70 (25%), Positives = 41/70 (58%)
 Frame = +1

Query: 484 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFA 663
           +I++  + R +  T +K     +KK +  E  + GG+ + K+++  +   K I ++S+F 
Sbjct: 136 IIKHSVIFRFLCCTFIKTNSMIKKK-YFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFH 194

Query: 664 QDEMIDCIGV 693
           ++++ID IG+
Sbjct: 195 ENDIIDAIGI 204


>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
           Thermoplasmatales|Rep: 50S ribosomal protein L3P -
           Thermoplasma volcanium
          Length = 331

 Score = 64.1 bits (149), Expect = 3e-09
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
 Frame = +1

Query: 55  RHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINK 234
           R GSM +YP+ R++    +++++P  + S PV +  F G+K GMTHV     R  S    
Sbjct: 8   RRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVTAG 65

Query: 235 KEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXX 414
           + I   VT+IE PP+  +G+  Y E   G    + V  E  +++  +  +K         
Sbjct: 66  QPIFVPVTVIEVPPLDVIGIRLYDEDEEG---NMVVVYEKWTQNLDKELFKK-------- 114

Query: 415 XXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG- 591
                     E+  K + +       Y  V  ++A     +     KK  I E+++ GG 
Sbjct: 115 -----ITTFKEVKEKPVPE------TYADVRLIVATRNKDVPGIPSKKPEIFELRIGGGN 163

Query: 592 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGV 693
           +++++ ++A  HL K I  +      + +D + V
Sbjct: 164 SVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSV 197


>UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN
           full-length enriched library, clone:C130041A08
           product:weakly similar to 60S RIBOSOMAL PROTEIN L3; n=1;
           Mus musculus|Rep: 16 days embryo head cDNA, RIKEN
           full-length enriched library, clone:C130041A08
           product:weakly similar to 60S RIBOSOMAL PROTEIN L3 - Mus
           musculus (Mouse)
          Length = 109

 Score = 39.9 bits (89), Expect = 0.058
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +1

Query: 100 HRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 237
           HR + K FPK+D  K  HL  F+  +A MT+ V E +R G K  +K
Sbjct: 8   HRIQAKDFPKEDLPKSAHLIVFLVSRAVMTYFVWEINRSGPKWTRK 53


>UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 253

 Score = 36.7 bits (81), Expect = 0.54
 Identities = 21/77 (27%), Positives = 41/77 (53%)
 Frame = +1

Query: 448 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 627
           L RKSIE +  + IR+ +V   I    +K++++++   +  E +L  GT + +   A   
Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194

Query: 628 LEKPIPVDSVFAQDEMI 678
            EKPI ++ +   ++ I
Sbjct: 195 KEKPISLEEILDPEDRI 211


>UniRef50_Q69NC6 Cluster: Putative uncharacterized protein
           OJ1742_G01.32; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1742_G01.32 - Oryza sativa subsp. japonica (Rice)
          Length = 100

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 234 ERDRGGCHHHRDSSDGLCRCCWIH*DPSWTTRSVD 338
           E DRG CHH+   S GLCR C +   P+ T   V+
Sbjct: 36  EGDRGCCHHYLTGSPGLCRRCPLRAHPAATGFEVE 70


>UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2;
           Clostridiaceae|Rep: Purine catabolism PurC-like -
           Clostridium oremlandii OhILAs
          Length = 551

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +1

Query: 499 SVVRVIAHTQMKLLKQRQKKAH--IMEIQLNGGTIEDKVKWAREHLEKPI 642
           SV + I + Q  LL QR +K H  +M + L GG+IED  +  RE+L  P+
Sbjct: 126 SVFKEIFNKQTSLL-QRLEKVHEQLMNVVLEGGSIEDIGRVTRENLRNPL 174


>UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1205

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +1

Query: 85  KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH--VVREPDRPGSKINKKEIVEAVT 258
           K +++   K+K   +++  K  +  AFI   A  ++   +R  DR   ++N   I  + T
Sbjct: 19  KANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRVNLPVIDRSGT 78

Query: 259 IIETPPMVCVGVVG 300
            +ETPP V + VVG
Sbjct: 79  AVETPPYV-IAVVG 91


>UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to
           ENSANGP00000006197; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000006197 - Nasonia
           vitripennis
          Length = 1307

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = -1

Query: 412 PSSCICTSFCRSDVDSLQTYAPPRQSTERVVHEGSQCIQQHRHKPSEESR 263
           PS+ I T    SD++ L     P QS+  V+ +GS+    HR K SEE R
Sbjct: 840 PSASINTKKYESDIEILSN---PSQSSIEVLDDGSKSTTPHRKKSSEERR 886


>UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1;
           Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
           protein - Sulfurovum sp. (strain NBC37-1)
          Length = 135

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 436 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 591
           WQD    K I+KD+   + YC  +R+  H   +L   ++ K HI+  +   G
Sbjct: 29  WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79


>UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4;
           Arabidopsis thaliana|Rep: Putative F-box protein
           At1g33020 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 518

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 653 ESTGIGFSRCSLAHFTLSSMVPPLSWISIM*AFFCRCFNSFI 528
           E TG+  S+C  +H  +S  + PL W+SI+  F    + SF+
Sbjct: 474 EFTGVKTSKCDTSHLQVSCELSPLCWLSIL-LFLVMVYMSFM 514


>UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsis
           invicta virus 1|Rep: Structural polyprotein - Solenopsis
           invicta virus 1
          Length = 1137

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = -2

Query: 279 HRRSLDDGDSLHDLFLVDF*TGTVRFSNHVGHTGLITDKSSQMNRFARVV 130
           HRR +    ++ D+ LVD    T++    VG  GLITD +S ++  A  V
Sbjct: 475 HRRDVTAARAIADMILVDERDATMQVQAEVGGQGLITDIASTVSAVAGAV 524


>UniRef50_Q5C2N1 Cluster: SJCHGC03405 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC03405 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 321

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 46  SAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFI 168
           SA  H + G+Y + + RR  G   AF K D      LTAF+
Sbjct: 225 SAQSHITSGYYQQMKYRRDDGSFSAFGKSDKHGSTWLTAFV 265


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,348,727
Number of Sequences: 1657284
Number of extensions: 15259878
Number of successful extensions: 38814
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 37344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38777
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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