BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12b06 (454 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 7.1 AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 7.1 EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 20 9.4 EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 20 9.4 DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 20 9.4 AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 20 9.4 >AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor candidate 49 protein. Length = 418 Score = 20.6 bits (41), Expect = 7.1 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = -2 Query: 372 FFCF*IYGFHFYNFEDFSNYFRLL*G 295 F C Y + FY ++ Y R L G Sbjct: 79 FLCLPFYSYFFYLSYIYTTYSRKLSG 104 >AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor candidate 14 protein. Length = 374 Score = 20.6 bits (41), Expect = 7.1 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = -2 Query: 372 FFCF*IYGFHFYNFEDFSNYFRLL*G 295 F C Y + FY ++ Y R L G Sbjct: 35 FLCLPFYSYFFYLSYIYTTYSRKLSG 60 >EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase 2B protein. Length = 528 Score = 20.2 bits (40), Expect = 9.4 Identities = 6/10 (60%), Positives = 8/10 (80%) Frame = -1 Query: 409 FEIDKVGCNW 380 F+IDK C+W Sbjct: 73 FDIDKQTCDW 82 >EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase 1 protein. Length = 534 Score = 20.2 bits (40), Expect = 9.4 Identities = 6/10 (60%), Positives = 8/10 (80%) Frame = -1 Query: 409 FEIDKVGCNW 380 F+IDK C+W Sbjct: 81 FDIDKQTCDW 90 >DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation protein. Length = 947 Score = 20.2 bits (40), Expect = 9.4 Identities = 5/9 (55%), Positives = 8/9 (88%) Frame = +1 Query: 367 KKCCPNCSQ 393 K+CC NC++ Sbjct: 795 KQCCKNCAR 803 >AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor candidate 46 protein. Length = 1451 Score = 20.2 bits (40), Expect = 9.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -3 Query: 392 WLQLGQHFFVS 360 WLQLG FVS Sbjct: 905 WLQLGYLIFVS 915 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 105,833 Number of Sequences: 336 Number of extensions: 2099 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 122,585 effective HSP length: 52 effective length of database: 105,113 effective search space used: 10301074 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
- SilkBase 1999-2023 -