Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b06
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   9.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   9.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.4  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 372 FFCF*IYGFHFYNFEDFSNYFRLL*G 295
           F C   Y + FY    ++ Y R L G
Sbjct: 79  FLCLPFYSYFFYLSYIYTTYSRKLSG 104


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 372 FFCF*IYGFHFYNFEDFSNYFRLL*G 295
           F C   Y + FY    ++ Y R L G
Sbjct: 35  FLCLPFYSYFFYLSYIYTTYSRKLSG 60


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 409 FEIDKVGCNW 380
           F+IDK  C+W
Sbjct: 73  FDIDKQTCDW 82


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 409 FEIDKVGCNW 380
           F+IDK  C+W
Sbjct: 81  FDIDKQTCDW 90


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +1

Query: 367 KKCCPNCSQ 393
           K+CC NC++
Sbjct: 795 KQCCKNCAR 803


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 392 WLQLGQHFFVS 360
           WLQLG   FVS
Sbjct: 905 WLQLGYLIFVS 915


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,833
Number of Sequences: 336
Number of extensions: 2099
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)