Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b06
         (454 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113462-1|AAI13463.1|  337|Homo sapiens G protein-coupled recep...    31   1.8  
BC112011-1|AAI12012.1|  337|Homo sapiens G protein-coupled recep...    31   1.8  
AJ505757-1|CAD44281.1|  337|Homo sapiens putative orphan G prote...    31   1.8  

>BC113462-1|AAI13463.1|  337|Homo sapiens G protein-coupled receptor
           26 protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 262 PYVLSD*IEMFVLYFRRTLTVGAHWPIKKKCIAIS 158
           PYV++  +E+F      T+ +G+HW +  KC+A S
Sbjct: 256 PYVITRLVELF-----STVPIGSHWGVLSKCLAYS 285


>BC112011-1|AAI12012.1|  337|Homo sapiens G protein-coupled receptor
           26 protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 262 PYVLSD*IEMFVLYFRRTLTVGAHWPIKKKCIAIS 158
           PYV++  +E+F      T+ +G+HW +  KC+A S
Sbjct: 256 PYVITRLVELF-----STVPIGSHWGVLSKCLAYS 285


>AJ505757-1|CAD44281.1|  337|Homo sapiens putative orphan G
           protein-coupled receptor 26 protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 262 PYVLSD*IEMFVLYFRRTLTVGAHWPIKKKCIAIS 158
           PYV++  +E+F      T+ +G+HW +  KC+A S
Sbjct: 256 PYVITRLVELF-----STVPIGSHWGVLSKCLAYS 285


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,118,879
Number of Sequences: 237096
Number of extensions: 1071746
Number of successful extensions: 1742
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1742
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)