Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12b03
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    29   0.053
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   6.0  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    22   6.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.0  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 0.053
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +2

Query: 107 KTAKSQYLRQQPYSITPRQMPEYIE-GPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRL 283
           K  K+Q  + +P S T    P+ I+  P + D  +         SP   E   LI   RL
Sbjct: 269 KEKKAQKEKDKPNSTT-NGSPDVIKVEPELSDSEKTLCNGSKGISP---EQEELIH--RL 322

Query: 284 IESPRVIESPRIYEASRIINQPVITETPCNSVAPRVPSATIIT 412
           +      E P   +  RIINQP+  E  C+     +   TI+T
Sbjct: 323 VYFQNEYEHPSEEDVKRIINQPMDGEDQCDVRFRHITEITILT 365


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 396  RPR*LRTALRPSARTWPTQSS 458
            RP    T  RP+   WPTQ +
Sbjct: 1064 RPTTTSTTTRPTTTNWPTQGT 1084


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
 Frame = +2

Query: 485 NTKGGPELALQLASPV--LNEVFTSPVFSCGCPNPFSPNVVSPKAVSP-SMVPNFITAAF 655
           N   GP   LQ ++    L+  ++  + S   P    P + S    SP +   N+ + A 
Sbjct: 19  NWSSGPNATLQSSACTDDLSSCWSEDMGSFSLPLDLEP-LPSLFPFSPCNNTANYKSEAQ 77

Query: 656 NSPVSNAQPTCSLLSNLMSL 715
           N P S  QP+  +   L+SL
Sbjct: 78  NQPSSYKQPSSDMADVLLSL 97


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 575 PNPFSPNVVSPKAVSPSMVPNFITAAFNSPVSNAQPTCSLLSNLMS 712
           P P SP  +S   ++   +PN    +  S  S  QP C    +++S
Sbjct: 61  PTPSSPRSISEDPLNCRDLPNSRCNSRESSDSLVQPRCPSGESMLS 106


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 629 VPNFITAAFNS 661
           +PNFI AAF S
Sbjct: 79  IPNFIAAAFES 89


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 629 VPNFITAAFNS 661
           +PNFI AAF S
Sbjct: 19  IPNFIAAAFES 29


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 62  MSKFVLLLISMTIFDKTAKSQYLR 133
           +S F+L+ IS+  F    K  YLR
Sbjct: 139 LSSFILVCISVDRFYAVLKPLYLR 162


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 62  MSKFVLLLISMTIFDKTAKSQYLR 133
           +S F+L+ IS+  F    K  YLR
Sbjct: 139 LSSFILVCISVDRFYAVLKPLYLR 162


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 732 YIELPNKLMRFDNKL 688
           +IE  NKL+ FD KL
Sbjct: 102 FIEFINKLIEFDVKL 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,339
Number of Sequences: 336
Number of extensions: 3562
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)