Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12b03
(753 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g66940.2 68414.m07609 protein kinase-related 33 0.27
At5g65620.1 68418.m08255 peptidase M3 family protein / thimet ol... 32 0.47
At1g66220.1 68414.m07516 subtilase family protein contains simil... 31 1.1
At1g33560.1 68414.m04153 disease resistance protein (CC-NBS-LRR ... 31 1.1
At3g02210.1 68416.m00202 phytochelatin synthetase family protein... 30 1.4
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 30 1.9
At4g25650.2 68417.m03694 Rieske [2Fe-2S] domain-containing prote... 29 2.5
At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing prote... 29 2.5
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 29 3.3
At5g15420.1 68418.m01805 expressed protein 29 4.4
At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4) i... 28 5.8
At2g41720.2 68415.m05156 pentatricopeptide (PPR) repeat-containi... 28 5.8
At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containi... 28 5.8
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 28 7.7
At2g35610.1 68415.m04365 expressed protein 28 7.7
At1g08370.1 68414.m00926 hydroxyproline-rich glycoprotein family... 28 7.7
>At1g66940.2 68414.m07609 protein kinase-related
Length = 309
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 548 TSPVFSCGCPNPFSPNVVSPKAVSPSMVPNFITAAFNSPVSNAQPTCSLLSNLMSLF 718
TS F C C +P+S + S + S + +F F+ +S +Q CS +N S F
Sbjct: 246 TSSTFLCYCKDPYSLSCSSGSKI--SFIGSFTDTLFSFMISVSQFLCSFSANCFSFF 300
>At5g65620.1 68418.m08255 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P27237
Oligopeptidase A (EC 3.4.24.70) {Salmonella
typhimurium}; contains Pfam profile PF01432: Peptidase
family M3
Length = 791
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 89 SMTIFDKTAKSQYLRQQPYSITPRQMPEYIEGPRVYDG 202
SMT +D T S+ LR+ Y I ++ Y P+V DG
Sbjct: 425 SMTHWDTTFWSERLRESKYDINEEELRPYFSLPKVMDG 462
>At1g66220.1 68414.m07516 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]; contains Pfam profiles: PF00082 Subtilase
family (3 copies)
Length = 753
Score = 30.7 bits (66), Expect = 1.1
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Frame = +2
Query: 326 ASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLANTIQLMIICNLLQNTKGGPE 505
A I Q VI T C+SV VP A + + + + T+ + K P
Sbjct: 431 AGIIYAQSVIDPTVCSSVD--VPCAVVDYEYGTDILYYMQTTV--------VPKAKLSPS 480
Query: 506 LALQLASPVLNEVFTSPVFSCGCPNPFSPNVVSPKAVSPSMVPNFITAA-----FNSPVS 670
L + P+ + V P FSC PN SP ++ P +P + N ++A F S S
Sbjct: 481 KTL-IGRPIASRV---PRFSCRGPNSVSPAILKPDIAAPGV--NVLSAVSGVYKFMSGTS 534
Query: 671 NAQPTCSLLSNLM 709
A P S + L+
Sbjct: 535 MATPAVSGIVGLL 547
>At1g33560.1 68414.m04153 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 787
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 DSPRLIESPRLIEGPRLIESPRVIESPRIYEASRIINQPV-ITETPC 370
+S + PR++E P+ + + + +E R+Y +I+ PV + E PC
Sbjct: 654 NSLSITNCPRILELPKNLSNVQSLERLRLYACPELISLPVEVCELPC 700
>At3g02210.1 68416.m00202 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL3 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623);
supported by cDNA: gi|26452134|dbj|AK118555.1; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 452
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 500 PELALQLASPVLNEVFTSPVFSCGCPNPFSP-NVVSPKAVS-PSMVPN 637
P + L+S + + P SCGC N P N V PK S++PN
Sbjct: 228 PTCCVSLSSFYNKTIVSCPTCSCGCRNTSQPGNCVDPKGPRIASVIPN 275
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 188 RVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASR 334
RV PR F PR +SPR SPR +E P VI++ +E+ R
Sbjct: 97 RVPASPRAFVYPRSVESPR-FGSPRSVESPCFGSPIGVIDTASPFESVR 144
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 185 PRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPR 316
PR + PR E PRF SPR +ESP +I++ ES R
Sbjct: 102 PRAFVYPRSVESPRF-GSPRSVESPCFGSPIGVIDTASPFESVR 144
Score = 27.9 bits (59), Expect = 7.7
Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 236 SPRLI--ESPRLIEGPRLIESPRVIESPRIYEASRIINQP---VITETPCNSVAPRVPSA 400
SPRL SPR PR +ESPR SPR E S P + T +P SV V
Sbjct: 93 SPRLRVPASPRAFVYPRSVESPR-FGSPRSVE-SPCFGSPIGVIDTASPFESVREAVSKF 150
Query: 401 TIITD 415
ITD
Sbjct: 151 GGITD 155
>At4g25650.2 68417.m03694 Rieske [2Fe-2S] domain-containing protein
similar to cell death suppressor protein lls1 from Zea
mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
[2Fe-2S] domain
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 521 ASPVLNEVFTSPVFSCGCPNPFSPNVVSPKAVSPSMVPNFITAAFNSPVSNA 676
A P L + T P F C NP P +SP ++ F TA + P S+A
Sbjct: 9 ALPSLRILNTKPRFRCSFSNPSLP--ISPNSLITRKSSRFTTAVSSPPSSSA 58
>At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing protein
similar to cell death suppressor protein lls1 from Zea
mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
[2Fe-2S] domain
Length = 536
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 521 ASPVLNEVFTSPVFSCGCPNPFSPNVVSPKAVSPSMVPNFITAAFNSPVSNA 676
A P L + T P F C NP P +SP ++ F TA + P S+A
Sbjct: 9 ALPSLRILNTKPRFRCSFSNPSLP--ISPNSLITRKSSRFTTAVSSPPSSSA 58
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 29.1 bits (62), Expect = 3.3
Identities = 42/151 (27%), Positives = 58/151 (38%), Gaps = 1/151 (0%)
Frame = +2
Query: 254 SPRLIEGPRLIESPRVIESPRIYEASRIINQPVITETPCNSVAPRVPSATIITDCTPTVC 433
S R P LI P SP R QP T + +P + S TP+
Sbjct: 29 SSRTSLSPPLIRYPA--GSPDFSPGPRCTTQPSPTFSDFTQASPSLTSFNNPASFTPSF- 85
Query: 434 KNLANTIQLMIICNLLQNTKGGPELALQLASPVLNEVFTSPVFSCGCPNPFSPNVVSPKA 613
+ +N Q++ + N+K A +S TSP SC P+ FSP+ S
Sbjct: 86 -SFSNIHQMIPTPSSSHNSKASVSSA---SSSSFYFPQTSPS-SCSTPSSFSPDSFSHSN 140
Query: 614 VSPSMVPNFITAAFNSPV-SNAQPTCSLLSN 703
P +P SPV S+ P S LS+
Sbjct: 141 TGPWSIPQ------PSPVFSSIAPASSALSS 165
>At5g15420.1 68418.m01805 expressed protein
Length = 159
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 224 RFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASRIINQ-PVITETPCNSVAP 385
+F +LI+ +L+E RL++ ++ + ++ + SR++ + P+I + P P
Sbjct: 36 QFAQKSQLIDRRQLVERSRLVKIIQLAQKSQLIDTSRLVERSPLIEDHPARPEEP 90
>At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4)
identical to SUVH4 [Arabidopsis thaliana] GI:13517749;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH4 (SUVH4) GI:13517748
Length = 624
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 320 YEASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLANTIQ 457
Y R+ QP +T N VA R+P++T ++ VC++++ ++
Sbjct: 298 YRLKRLEGQPELTTDQVNFVAGRIPTST--SEIEGLVCEDISGGLE 341
>At2g41720.2 68415.m05156 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 683
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 142 GLLPEILRFCCLIKYSHRNQQQNKLRHVF 56
G++P+++ + CL+ R++Q K + VF
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
>At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 142 GLLPEILRFCCLIKYSHRNQQQNKLRHVF 56
G++P+++ + CL+ R++Q K + VF
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 114 QNRNISGSNPTA*LQDKCRNTSKGPEF 194
+ +N + +NPT+ Q K +NTS+GPEF
Sbjct: 351 EKKNNTVANPTS-QQPKRQNTSEGPEF 376
>At2g35610.1 68415.m04365 expressed protein
Length = 644
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 113 AKSQYLRQQPYSITPRQMPEYIEGPRVYDGPRIFEGPRFYDSPRLIESP 259
A Q LR +PY++ EG R R+ EG FYD P +SP
Sbjct: 355 AMYQQLRLEPYAVHTTFQYAGTEGKR----HRLREGMVFYDPPEYYDSP 399
>At1g08370.1 68414.m00926 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; contains some similarity to
transcription factor [Danio rerio]
gi|15617376|emb|CAC69871
Length = 367
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 221 PRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASRI---INQPVITETPCNSVAPRV 391
P F+ PR++ P LI G + +P + + ++ + QP TP S+AP
Sbjct: 271 PSFFGPPRMMAQPHLIPGVSMPTAPPLNPNNASHQQRSYGTPVLQPFPPPTPPPSLAP-A 329
Query: 392 PSATIIT 412
P+ +I+
Sbjct: 330 PTGPVIS 336
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,395,126
Number of Sequences: 28952
Number of extensions: 323808
Number of successful extensions: 1052
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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