Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12a23
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 135 3e-32
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 128 4e-30
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 126 2e-29
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 125 4e-29
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 125 4e-29
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 124 5e-29
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 124 5e-29
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 124 8e-29
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 124 8e-29
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 123 1e-28
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 123 1e-28
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 123 1e-28
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 121 6e-28
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 120 1e-27
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 102 2e-22
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 99 4e-21
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 97 1e-20
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 96 2e-20
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 96 2e-20
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 96 3e-20
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 95 6e-20
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 95 6e-20
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 93 2e-19
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 92 4e-19
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 90 1e-18
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 90 2e-18
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 2e-18
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 2e-18
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 89 3e-18
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 85 4e-17
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 84 8e-17
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 83 2e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 82 4e-16
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 80 2e-15
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 79 2e-15
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 78 7e-15
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 75 4e-14
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 74 9e-14
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 69 2e-12
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 55 4e-08
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 55 6e-08
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 54 8e-08
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 54 1e-07
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 54 1e-07
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 49 4e-06
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 48 5e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 46 4e-05
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 45 5e-05
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 44 8e-05
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 38 0.009
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 35 0.065
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 31 0.61
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 31 0.81
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 31 1.1
At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protei... 31 1.1
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 30 1.4
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 29 3.3
At4g21770.1 68417.m03150 pseudouridine synthase family protein c... 28 5.7
At5g08420.1 68418.m00992 expressed protein 28 7.5
At3g15400.1 68416.m01954 anther development protein, putative si... 28 7.5
At1g80240.1 68414.m09390 expressed protein contains Pfam profile... 28 7.5
At3g62360.1 68416.m07005 expressed protein 27 9.9
At1g75000.1 68414.m08707 GNS1/SUR4 membrane family protein conta... 27 9.9
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 135 bits (327), Expect = 3e-32
Identities = 59/147 (40%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ +EL D+++ + V E +I WQ I+ P + PY+ G F + I+F ++Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++FKTK+YHPNID KG +CL I+ E W PA T +V+ ++ +L+ DP P PL
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILK-EQWSPAPTTSKVLLSICSLLTDPNPNDPL 120
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + D+ K+ A+++T+K++
Sbjct: 121 VPEIAHLYKVDKSKYESTAQKWTQKYA 147
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 128 bits (309), Expect = 4e-30
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ + V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK+SFKTK+YHPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRSKYESTARSWTQKYA 146
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 126 bits (303), Expect = 2e-29
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPN++ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYESTARSWTQKYA 146
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 125 bits (301), Expect = 4e-29
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 91 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 149
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + D+ K+ A +T+K++
Sbjct: 150 VPEIAHMYKTDKNKYESTARTWTQKYA 176
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 125 bits (301), Expect = 4e-29
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARTWTQKYA 146
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 124 bits (300), Expect = 5e-29
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYEATARNWTQKYA 146
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 124 bits (300), Expect = 5e-29
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYEATARNWTQKYA 146
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 124 bits (298), Expect = 8e-29
Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 124 bits (298), Expect = 8e-29
Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 123 bits (297), Expect = 1e-28
Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 120
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + DR K+ A +T+K++
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYA 147
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 123 bits (296), Expect = 1e-28
Identities = 55/147 (37%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK+YHPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILK-EQWSPALTVSKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + DR K+ A+ +T+K++
Sbjct: 120 VPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 123 bits (296), Expect = 1e-28
Identities = 55/147 (37%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK++F+TK+YHPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILK-EQWSPALTVSKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + DR K+ A+ +T+K++
Sbjct: 120 VPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 121 bits (291), Expect = 6e-28
Identities = 55/147 (37%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
ATRR+ KEL ++++ S E ++ WQ I+ P+ PY+ G F + I+FP +Y
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
PFKPPK+ F+TK++HPNI+ G +CL I+ + W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILK-DQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKKHS 600
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHIYKTDKTKYEAMARSWTQKYA 146
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 120 bits (289), Expect = 1e-27
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Frame = +1
Query: 214 KSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPN 390
+S I + +NI W +I PD PY G F + I FP +YPFKPPK +FKT IYHPN
Sbjct: 24 ESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPN 83
Query: 391 IDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTK 570
I+++G +C+ I+ + W PA ++V+ +++ L+ P P+ PL E+ + F +R +F +
Sbjct: 84 INDEGSICMNILK-DKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQ 142
Query: 571 NAEEFTKKHS 600
A EFT +H+
Sbjct: 143 RAREFTARHA 152
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 102 bits (245), Expect = 2e-22
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Frame = +1
Query: 172 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 348
R+QKEL D ++ S + N+ G I P PY G F+I+I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 349 PPKISFKTKIYHPNI-DEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRA 525
PPK+ F TK++HPNI + G +CL I+ + W PA + ++ AL++ PEP+ P A
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILK-DQWSPALTLKTALVSIQALLSAPEPKDPQDA 124
Query: 526 ELAEEFLKDRKKFTKNAEEFTKKHSEK 606
+AE+++K+ + F A +T+ ++K
Sbjct: 125 VVAEQYMKNYQVFVSTARYWTETFAKK 151
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 98.7 bits (235), Expect = 4e-21
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +1
Query: 247 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 423
N+ W I+ P PY G F ++I FP++YPFKPPK+ FKT+IYH N+D G + + I
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNI 123
Query: 424 ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 603
+ ++W PA +V+QA+ ++ PEP P +A +L DR+K + A+E+T + ++
Sbjct: 124 L-RDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/121 (35%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +1
Query: 241 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 417
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 418 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 597
I+ + W PA + V+ ++ AL++ P P+ PL +A+ + + + + A+E+T+ +
Sbjct: 91 DILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLY 149
Query: 598 S 600
+
Sbjct: 150 A 150
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Frame = +1
Query: 160 AATRRLQKELNDIRQSGLKSFRDIQV--DESNILTWQGLIV-PDNPPYNKGAFRIEINFP 330
A+ RL KE ++++ + DIQ+ D++NI W LI P PY G F++ + P
Sbjct: 3 ASRARLFKEYKEVQREKVAD-PDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 331 AEYPFKPPKISFKTKIYHPNIDEK-GQVCLPIISAENWKPATKTDQVIQALVALVNDPEP 507
YP +PP++ F TKI+HPN+ K G++CL I+ W PA V +A++AL+ PEP
Sbjct: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 508 EHPLRAELAEEFLK-DRKKFTKNAEEFTK 591
+ PL + D + F A+ +T+
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTR 149
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 96.3 bits (229), Expect = 2e-20
Identities = 40/111 (36%), Positives = 69/111 (62%)
Frame = +1
Query: 268 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKP 447
++ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL I+ + W P
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-DKWSP 66
Query: 448 ATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 600
A + V+ ++ AL++ P P+ PL +A+ + + + + A+E+T+ ++
Sbjct: 67 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 117
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +1
Query: 241 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 417
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 418 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 597
I+ + W PA + V+ ++ AL++ P P+ PL +A+ + + + A+E+T+ +
Sbjct: 91 DILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLY 149
Query: 598 S 600
+
Sbjct: 150 A 150
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +1
Query: 277 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAE---NWKP 447
P++ Y G F ++I P YPF+PP +SF T IYHPNID G++CL I++ W+P
Sbjct: 54 PEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQP 113
Query: 448 ATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 603
+ V+ ++ L+++P P+ L E++ E+ +R+ F A E T+K+++
Sbjct: 114 SLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAK 165
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 94.7 bits (225), Expect = 6e-20
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Frame = +1
Query: 160 AATRRLQKELNDIRQSGLK-SFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 333
+A RL KE + + LK R NI W+ + P PY KG F + ++ P
Sbjct: 29 SAENRLWKEFQE-KDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPP 87
Query: 334 EYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEH 513
+YP++PPKI+FKTKI+HPNI E G++ + I+ + W A + V+ ++ +++++P
Sbjct: 88 KYPYEPPKITFKTKIFHPNISEIGEIFVDILGS-RWSSALTINLVLLSICSILSNPVEPL 146
Query: 514 PLRAELAEEFLKDRKKFTKNAEEFTKKHSE 603
+ A + KDRK + K A E+T K+++
Sbjct: 147 LVSNHAARLYQKDRKAYEKVAREWTLKYAK 176
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQV 468
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKV 102
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
P KPP + F ++++HPNI G +CL I+ W P ++ ++ +L+ DP P P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPA 122
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKK 594
+E A F + ++++ + E ++
Sbjct: 123 NSEAARMFSESKREYNRRVREVVEQ 147
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A+ LQK+L D+ + + F VDE N+ W I+ P + Y G F ++FP Y
Sbjct: 6 ASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENY 65
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPI------------ISAENWKPATKTDQVIQALV 483
P PP ++F ++++HPN+ G+VC+ I +++E W P + ++ +++
Sbjct: 66 PVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSII 125
Query: 484 ALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 603
++++ P E P E A+E+ +R +F K ++ E
Sbjct: 126 SMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQE 165
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 89.8 bits (213), Expect = 2e-18
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = +1
Query: 241 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 417
++NI+ W LI P++ P++ G F++ ++F +YP KPP + F ++++HPNI G +CL
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICL 89
Query: 418 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 594
I+ W P V+ ++ +L+ DP P+ P AE A F ++++++ + E ++
Sbjct: 90 DILQ-NQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
P KPP + F ++++HPNI G +CL I+ W P ++ ++ +L+ DP P P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPA 122
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKK 594
+E A + + ++++ + + ++
Sbjct: 123 NSEAARMYSESKREYNRRVRDVVEQ 147
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 519
P KPP + F ++++HPNI G +CL I+ W P ++ ++ +L+ DP P P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPA 122
Query: 520 RAELAEEFLKDRKKFTKNAEEFTKK 594
+E A + + ++++ + + ++
Sbjct: 123 NSEAARMYSESKREYNRRVRDVVEQ 147
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Frame = +1
Query: 175 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 351
LQK+L D+ + + F VDE NI W I+ P + Y G F ++FP YP P
Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSP 68
Query: 352 PKISFKTKIYHPNIDEKGQVCLPI------------ISAENWKPATKTDQVIQALVALVN 495
P + F + I+HPN+ G+VC+ I +++E W P + ++ +++++++
Sbjct: 69 PTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLS 128
Query: 496 DPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 603
P E P E A+E+ + R +F K +K E
Sbjct: 129 GPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQE 164
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 85.4 bits (202), Expect = 4e-17
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = +1
Query: 154 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFP 330
+ + +RLQ EL + G +E NI W+G I +G +R+ ++F
Sbjct: 33 SQSVLKRLQSELMGLMMGGGPGISAFP-EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFS 91
Query: 331 AEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPE 510
+YPFKPPK+ F+T +HPN+D G +CL I+ + W A ++ ++ +L+ +P
Sbjct: 92 NDYPFKPPKVKFETCCFHPNVDVYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNIS 150
Query: 511 HPLRAELAEEFLKDRKKFTKNAEEFTKKHS 600
PL + A + +++++ K E+ K S
Sbjct: 151 SPLNTQ-AAQLWSNQEEYRKMVEKLYKPPS 179
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 84.2 bits (199), Expect = 8e-17
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +1
Query: 277 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 453
P + Y G ++I + P YP+K P + F TKIYHPN+DE G VCL +I+ + W P
Sbjct: 39 PKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVIN-QTWSPMF 97
Query: 454 KTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEKR 609
V + L L+ P P PL E A ++DR + + +E+ +K+++ R
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPR 150
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 82.6 bits (195), Expect = 2e-16
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +1
Query: 277 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 453
P + Y G ++I + P YP+K P + F TKIYHPN+DE G VCL +I+ + W P
Sbjct: 39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVIN-QTWSPMF 97
Query: 454 KTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 603
V + L L+ P P PL E A ++DR + + +E+ +K+++
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAK 148
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/148 (26%), Positives = 76/148 (51%)
Frame = +1
Query: 169 RRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFK 348
++L KEL + +S + + DE + P PY G FR+++ ++P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 349 PPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAE 528
PPK F TKI+HPN+ G++C+ + ++W P+ V+ + L+ +P PE L +
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLK-KDWNPSLGLRHVLSVVRCLLIEPFPESALNEQ 131
Query: 529 LAEEFLKDRKKFTKNAEEFTKKHSEKRP 612
+ L++ ++ ++A +T H++ +P
Sbjct: 132 AGKMLLENYDEYARHARLYTGIHAKPKP 159
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Frame = +1
Query: 160 AATRRLQKELNDIRQSGLKSFR-DIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAE 336
A RL K+++++ KS + +++++ ++ I PD Y G F
Sbjct: 31 AGELRLHKDISELNLP--KSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNM 88
Query: 337 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHP 516
YP + PK+ KTK+YHPNID +G VCL I+ E+WKP + VI L L +P E P
Sbjct: 89 YPHEAPKVKCKTKVYHPNIDLEGNVCLNIL-REDWKPVLNINTVIYGLFHLFTEPNYEDP 147
Query: 517 LRAELAEEFLKDRKKFTKN 573
L E A + K F N
Sbjct: 148 LNHEAAAVLRDNPKTFEYN 166
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Frame = +1
Query: 277 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 453
P + Y G ++I++ P YP+K P + F KIYHPN+DE G VCL +I+ + W P
Sbjct: 39 PTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVIN-QTWSPMF 97
Query: 454 KTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 603
V ++ L L+ P P P E A ++DR + +E+ +K+++
Sbjct: 98 DLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAK 148
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 77.8 bits (183), Expect = 7e-15
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Frame = +1
Query: 169 RRLQKELNDIRQS---GLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFPAE 336
+RLQ EL + G+ +F + E NI W+G I +G +R+ + F +
Sbjct: 39 KRLQSELMGLMMGADPGISAFPE----EDNIFCWKGTITGSKDTVFEGTEYRLSLTFSND 94
Query: 337 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHP 516
YPFK PK+ F+T +HPN+D G +CL I+ + W A ++ ++ +L+ +P P
Sbjct: 95 YPFKSPKVKFETCCFHPNVDLYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSP 153
Query: 517 LRAELAEEFLKDRKKFTKNAEEFTK 591
L + A + +++++ K E+ K
Sbjct: 154 LNNQ-AAQLWSNQEEYRKMVEKLYK 177
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Frame = +1
Query: 211 LKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHP 387
L +++ D NI W I+ P + Y G F + FP YP PP + F + ++HP
Sbjct: 53 LSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHP 112
Query: 388 NIDEKGQVCLPI------------ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAEL 531
N+ G+VC+ I +++E W P + ++ +++++++ P E P E
Sbjct: 113 NVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEA 172
Query: 532 AEEFLKDRKKFTKNAEEFTKKHSE 603
A+E+ R +F K +K E
Sbjct: 173 AKEWRDKRDEFKKKVSRCVRKSQE 196
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 241 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 417
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 418 PIISAENWKPATKTDQVI 471
I+ + W PA + V+
Sbjct: 91 DILK-DKWSPALQIRTVL 107
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +1
Query: 247 NILTWQGLIVPD-NPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 423
N++ W I + G F + ++F +YP KPPK F +HPN+ G VCL I
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 424 ISAE-NWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 597
++ + W+PA Q++ + L++ P P P + + F +D ++ K + +K++
Sbjct: 98 LNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 56.8 bits (131), Expect = 1e-08
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Frame = +1
Query: 163 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 339
A +R+ +E+ +++ + F + ++E NI WQ I P + + G + I PA+Y
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 340 PFKPPKISFKTKIYHPNIDEKGQVCLPIIS--AENWKPATKTDQVIQALVALVNDPEPEH 513
PFKPP SF + + ++CL I + E+W+P+ + AL+A + P
Sbjct: 71 PFKPP--SFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFM----PTS 124
Query: 514 PLRAELAEEFLKDRKK--FTKNAEEFTKKHSEKRP--TD*IHYKNFKFRFTAVPK 666
P A + ++ KD ++ K+ E K S +R D IH + + T VPK
Sbjct: 125 PNGALGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIH-QYILSKATVVPK 178
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 55.2 bits (127), Expect = 4e-08
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Frame = +1
Query: 145 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIE 318
K + A RLQKEL++ + + FR D N+ W + V P Y ++++
Sbjct: 10 KALSKIACNRLQKELSEWQLNPPTGFRHKVTD--NLQKWT-IDVTGAPGTLYANETYQLQ 66
Query: 319 INFPAEYPFKPPKISFKTKI-YHPNIDEKGQVCLPIISAENWKPATKTDQV-IQALVALV 492
+ FP YP + P++ F + HP+I G +CL I+ ++W PA + V I L L
Sbjct: 67 VEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDIL-YDSWSPAMTVNSVCISILSMLS 125
Query: 493 NDPEPEHP 516
+ P + P
Sbjct: 126 SSPAKQRP 133
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +1
Query: 145 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIE 318
K + A RLQKEL++ + + F+ D N+ W + V P Y + ++
Sbjct: 10 KALSKIACNRLQKELSEWQVNPPTGFKHRVTD--NLQKWV-IEVTGAPGTLYANETYNLQ 66
Query: 319 INFPAEYPFKPPKISFKTKI-YHPNIDEKGQVCLPIISAENWKPATKTDQV-IQALVALV 492
+ FP YP + P++ F HP+I G +CL I+ ++W PA V I L L
Sbjct: 67 VEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDIL-YDSWSPAMTVSSVCISILSMLS 125
Query: 493 NDPEPEHP 516
+ PE + P
Sbjct: 126 SSPEKQRP 133
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +1
Query: 145 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ-GLIVPDNPPYNKGAFRIEI 321
K + AT RLQKEL + + + F+ D N+ W +I Y +++++
Sbjct: 10 KTLSKIATNRLQKELVEWQMNPPTGFKHKVTD--NLQRWIIEVIGAPGTLYANDTYQLQV 67
Query: 322 NFPAEYPFKPPKISF-KTKIYHPNIDEKGQVCLPIISAENWKPATKTDQV-IQALVALVN 495
+FP YP + P++ F HP+I G +CL I+ ++W PA + I L L +
Sbjct: 68 DFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDIL-YDSWSPAMTVSSICISILSMLSS 126
Query: 496 DPEPEHP 516
E + P
Sbjct: 127 STEKQRP 133
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Frame = +1
Query: 145 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP---YNKGAFRI 315
K T AT RLQKE + + + F+ D N+ W +I P Y +++
Sbjct: 10 KGLTKIATNRLQKEFMEWQTNPPSGFKHRVSD--NLQRW--IIEVHGVPGTLYANETYQL 65
Query: 316 EINFPAEYPFKPPKISFKTKI-YHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALV 492
++ FP YP + P++ F+ HP+I G +CL ++ ++W PA + + ++++++
Sbjct: 66 QVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVL-YDSWSPAMRLSSICLSILSML 124
Query: 493 NDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEK 606
+ + + + + +LK+ K E + H +K
Sbjct: 125 SSSSVKQ--KPKDNDHYLKNCKHGRSPKETRWRFHDDK 160
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family protein
similar to ubiquitin-conjugating enzyme GB:3319990 from
[Mus musculus]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 1163
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Frame = +1
Query: 175 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 351
+QKE I L ++ ES I + +I+ + PY+ G F +I FP YP P
Sbjct: 610 IQKEWK-ILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVP 668
Query: 352 PKISFKT--KIYHPNIDEKGQVCLPIISA------ENWKPATKTD-QVIQALVALV---- 492
PK+ + + +PN+ + G+VCL +IS E W P T Q++ ++ AL+
Sbjct: 669 PKVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEK 728
Query: 493 ---NDPEPEHPLRAELAEEFLKDRKK-------FTKNAEEFTKKHSEKRPTD 618
N+P E + L E + KD + T + EEF + H R D
Sbjct: 729 PYYNEPGYEKSMGTPLGESYSKDYSENVFVFSLKTMHFEEFVRSHFFVRSHD 780
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Frame = +1
Query: 196 IRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 372
I ++ L ++ ES + + +I+ + PY+ G F +I FP YP PP + + +
Sbjct: 282 ILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHS 341
Query: 373 --KIYHPNIDEKGQVCLPII------SAENWKPATKTD-QVIQALVALVNDPEP 507
+PN+ G+VCL ++ + E W P T Q++ ++ AL+ + +P
Sbjct: 342 GGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKP 395
Score = 34.3 bits (75), Expect = 0.087
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +1
Query: 133 GHFSKFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAF 309
G SK + +++Q E + Q+ L ++ ES + + +I+ + PY+ G F
Sbjct: 908 GKASKQHSKNWVKKVQDEWKILNQN-LPETIFVRACESRMDLLRAVIIGAEGTPYHDGLF 966
Query: 310 RIEINFPAEYPFKPPKISFKT--KIYHPNIDEKGQVCLPI 423
+I FP YP PP + + + +PN+ G+V + I
Sbjct: 967 FFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 160 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 336
A +RLQKE + + + S + ++IL W ++ + P+ G + +I FP E
Sbjct: 5 ACIKRLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 337 YPFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENWKPATKTDQVIQALVALVNDPEP 507
YP+KPP I+ T + + ++CL + E+W P ++ L++ + D P
Sbjct: 64 YPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 160 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 336
A +RLQKE + + + S + ++IL W ++ + P+ G + +I FP E
Sbjct: 5 ACIKRLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 337 YPFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENWKPATKTDQVIQALVALVNDPEP 507
YP+KPP I+ T + + ++CL + E+W P ++ L++ + D P
Sbjct: 64 YPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 907
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Frame = +1
Query: 154 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNI-LTWQGLIVPDNPPYNKGAFRIEINFP 330
T + +++Q+E +++ ++ L + ++V E + L L+ PY+ G F +I P
Sbjct: 660 TKSWVKKVQQEWSNL-EANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLP 718
Query: 331 AEYPFKPPKISFKT--KIYHPNIDEKGQVCLPIIS------AENWKPATKTD-QVIQALV 483
+YP +PP + + + +PN+ E G+VCL +++ E W + + Q++ +
Sbjct: 719 PQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQ 778
Query: 484 ALVNDPEP 507
ALV + +P
Sbjct: 779 ALVLNEKP 786
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +1
Query: 289 PYNKGAFRIEINFPAEYPFKPPKISFKTKIY--HPNIDEKGQVCLPIISA------ENWK 444
PY G F + + P++YP PP + + + +PN+ E+G+VCL +++ E W
Sbjct: 893 PYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWD 952
Query: 445 PATKTDQVIQALVAL 489
P K+ ++Q LV+L
Sbjct: 953 P--KSSSILQVLVSL 965
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Frame = +1
Query: 169 RRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPF 345
+R+Q E I + L ++ ES + + +I+ PY+ G F +I FP YP
Sbjct: 335 KRIQDEWR-ILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPS 393
Query: 346 KPPKISFKT--KIYHPNIDEKGQVCLPIISA------ENWKPATKTD-QVIQALVALVND 498
PP + + + +PN+ G+VCL ++ E W P T T QV+ ++ L+ +
Sbjct: 394 TPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
Query: 499 PEP 507
+P
Sbjct: 454 QKP 456
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 208 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYH 384
G S+ D+ + +W G I+ P N Y F++++ EYP PP + F+T+I
Sbjct: 30 GTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINM 89
Query: 385 PNIDEKGQVCLPII--SAENWKPATKTDQVIQAL 480
++ + V P + NW+ + ++ L
Sbjct: 90 ACVNPETGVVEPSLFPMLTNWRREYTMEDILVKL 123
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 34.7 bits (76), Expect = 0.065
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +1
Query: 208 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYH 384
G S+ D+ + +W G I+ P N Y F++++ +YP PP + F+++I
Sbjct: 30 GTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINM 89
Query: 385 PNIDEKGQVCLP--IISAENW-KPATKTDQVIQ 474
++ + V P NW + T D +IQ
Sbjct: 90 ACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQ 122
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 238 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 378
D+ + +W G I+ P N + +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 238 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 378
D+ + +W G I+ P N + +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 238 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 378
D+ + +W G I+ P N ++G +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protein
contains Pfam domain, PF00575: S1 RNA binding domain
Length = 487
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 454 KTDQVIQALVALVNDPEPEHPLRAELAEE---FLKDRKKFTKNAEEFTKKHSEKRP 612
+ D+ ++ LV P+ A+L E F+ DR+K AEE KK+ EK P
Sbjct: 395 QVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVFTEAEEMAKKYREKMP 450
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 238 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 378
D+ + +W G I+ P N ++G +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +1
Query: 418 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 597
P AEN P + D L LV E E +LAEE + KK ++A KK
Sbjct: 429 PADVAENLMPKSDEDDADICLTRLVKSLEEEKEKAKKLAEE--EKMKKAARDARRIKKKA 486
Query: 598 SEK 606
E+
Sbjct: 487 EEE 489
>At4g21770.1 68417.m03150 pseudouridine synthase family protein
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 472
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +2
Query: 299 KVLSALRLT---FQQNTHSNPRKLVSKQRFTTLTLMK 400
+ L++ R+T F+ N HS PR + S +RFT L+L+K
Sbjct: 21 RTLASTRVTTPLFRSNKHS-PRFISSPKRFTCLSLLK 56
>At5g08420.1 68418.m00992 expressed protein
Length = 391
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 499 PEPEHP----LRAELAEEFLKDRKKFTKNAEEFTKKHSEK 606
P P+ P ++ E E F+ D+KK K +E +K SEK
Sbjct: 268 PPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEK 307
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 382 HPNIDEKGQVCLPIISAENWKPA--TKTDQVIQALVALVNDPEPEH 513
HP EK L +S E+ P K DQ++Q + + + + +P+H
Sbjct: 153 HPEHKEKPDHKLQSMSGESKHPEHKVKPDQIMQTMASELEEEDPDH 198
>At1g80240.1 68414.m09390 expressed protein contains Pfam profile
PF04862: Protein of unknown function, DUF642
Length = 370
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 QGLIVPDNPPYNKGAFRI-EINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPII 426
QG ++ D KG FR + F A +++F + YH D G +C P+I
Sbjct: 304 QGKVMVDYASKGKGGFRRGRLVFKAVSA--RTRVTFLSTFYHMKSDHSGSLCGPVI 357
>At3g62360.1 68416.m07005 expressed protein
Length = 1227
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 286 PPYNKGAFRIEINFPAEYPFKPPKIS 363
P Y+KG+F ++IN P + + P K++
Sbjct: 84 PVYDKGSFILKINGPDGWSWNPDKVT 109
>At1g75000.1 68414.m08707 GNS1/SUR4 membrane family protein contains
Pfam profile PF01151: GNS1/SUR4 family
Length = 281
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 597 VFFGKFFCILCKFLPIFEKFFG*FRPQWMLWFWIIHKS 484
VFF + L +FL +F FF R + + +F +I++S
Sbjct: 126 VFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQS 163
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,468,457
Number of Sequences: 28952
Number of extensions: 330500
Number of successful extensions: 978
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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